RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 PIK3C2AO00443 1686 aa28.4■■■□□ 2.14
CTSF-206ENST00000529199 CDCA7Q9BWT1 371 aaPredicted RBP28.4■■■□□ 2.14
CTSF-206ENST00000529199 CPSF1Q10570 1443 aaKnown RBP28.4■■■□□ 2.14
CTSF-206ENST00000529199 PTF1AQ7RTS3 328 aa28.39■■■□□ 2.14
CTSF-206ENST00000529199 MARCH10Q8NA82 808 aaPredicted RBP28.39■■■□□ 2.14
CTSF-206ENST00000529199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.38■■■□□ 2.13
CTSF-206ENST00000529199 BCL11BQ9C0K0 894 aaPredicted RBP28.38■■■□□ 2.13
CTSF-206ENST00000529199 PLSCR1O15162 318 aa28.37■■■□□ 2.13
CTSF-206ENST00000529199 CARD10Q9BWT7 1032 aa28.37■■■□□ 2.13
CTSF-206ENST00000529199 PPP1R1BQ9UD71 204 aaPredicted RBP28.37■■■□□ 2.13
CTSF-206ENST00000529199 RREB1Q92766 1687 aa28.37■■■□□ 2.13
CTSF-206ENST00000529199 NUP188Q5SRE5 1749 aa28.36■■■□□ 2.13
CTSF-206ENST00000529199 SPON1Q9HCB6 807 aa28.36■■■□□ 2.13
CTSF-206ENST00000529199 COL18A1P39060 1754 aa28.35■■■□□ 2.13
CTSF-206ENST00000529199 EXOC5O00471 708 aa28.34■■■□□ 2.13
CTSF-206ENST00000529199 KCNQ2O43526 872 aa28.34■■■□□ 2.13
CTSF-206ENST00000529199 TMC1Q8TDI8 760 aa28.34■■■□□ 2.13
CTSF-206ENST00000529199 CARD11Q9BXL7 1154 aa28.34■■■□□ 2.13
CTSF-206ENST00000529199 LRRC37A3O60309 1634 aa28.32■■■□□ 2.12
CTSF-206ENST00000529199 PEAK1Q9H792 1746 aa28.31■■■□□ 2.12
CTSF-206ENST00000529199 NME9Q86XW9 330 aa28.29■■■□□ 2.12
CTSF-206ENST00000529199 ANO8Q9HCE9 1232 aaPredicted RBP28.29■■■□□ 2.12
CTSF-206ENST00000529199 PROM2Q8N271 834 aa28.28■■■□□ 2.12
CTSF-206ENST00000529199 AKAP12Q02952 1782 aa28.27■■■□□ 2.12
CTSF-206ENST00000529199 HDGFL2Q7Z4V5 671 aaPredicted RBP28.27■■■□□ 2.12
CTSF-206ENST00000529199 NLRP2Q9NX02 1062 aa28.27■■■□□ 2.12
CTSF-206ENST00000529199 CCDC7Q96M83 1385 aa28.26■■■□□ 2.12
CTSF-206ENST00000529199 SLC12A5Q9H2X9 1139 aa28.26■■■□□ 2.11
CTSF-206ENST00000529199 NFAT5O94916 1531 aa28.25■■■□□ 2.11
CTSF-206ENST00000529199 RGPD5Q99666 1765 aa28.24■■■□□ 2.11
CTSF-206ENST00000529199 SBF2Q86WG5 1849 aa28.23■■■□□ 2.11
CTSF-206ENST00000529199 TXNRD1Q16881 649 aa28.23■■■□□ 2.11
CTSF-206ENST00000529199 BCL9O00512 1426 aa28.23■■■□□ 2.11
CTSF-206ENST00000529199 USP31Q70CQ4 1352 aa28.23■■■□□ 2.11
CTSF-206ENST00000529199 SBNO2Q9Y2G9 1366 aa28.23■■■□□ 2.11
CTSF-206ENST00000529199 DCAF8L1A6NGE4 600 aa28.22■■■□□ 2.11
CTSF-206ENST00000529199 PDGFDQ9GZP0 370 aaPredicted RBP28.22■■■□□ 2.11
CTSF-206ENST00000529199 STK32BQ9NY57 414 aa28.21■■■□□ 2.11
CTSF-206ENST00000529199 ZBTB7AO95365 584 aa28.2■■■□□ 2.1
CTSF-206ENST00000529199 ACSBG1Q96GR2 724 aa28.2■■■□□ 2.1
CTSF-206ENST00000529199 TERF2IPQ9NYB0 399 aa28.2■■■□□ 2.1
CTSF-206ENST00000529199 ANKRD24Q8TF21 1146 aa28.19■■■□□ 2.1
CTSF-206ENST00000529199 TONSLQ96HA7 1378 aa28.19■■■□□ 2.1
CTSF-206ENST00000529199 ERBB3P21860 1342 aa28.18■■■□□ 2.1
CTSF-206ENST00000529199 YY1P25490 414 aa28.18■■■□□ 2.1
CTSF-206ENST00000529199 CD163L1Q9NR16 1453 aa28.18■■■□□ 2.1
CTSF-206ENST00000529199 WNK3Q9BYP7 1800 aa28.18■■■□□ 2.1
CTSF-206ENST00000529199 IL2RBP14784 551 aa28.17■■■□□ 2.1
CTSF-206ENST00000529199 ATF5Q9Y2D1 282 aaPredicted RBP28.17■■■□□ 2.1
CTSF-206ENST00000529199 RGPD3A6NKT7 1758 aaPredicted RBP28.16■■■□□ 2.1
CTSF-206ENST00000529199 RGPD4Q7Z3J3 1758 aa28.16■■■□□ 2.1
CTSF-206ENST00000529199 TNS2Q63HR2 1409 aa28.16■■■□□ 2.1
CTSF-206ENST00000529199 MON2Q7Z3U7 1717 aa28.15■■■□□ 2.1
CTSF-206ENST00000529199 SLC15A2Q16348 729 aa28.15■■■□□ 2.1
CTSF-206ENST00000529199 NINLQ9Y2I6 1382 aa28.14■■■□□ 2.1
CTSF-206ENST00000529199 ABCC6O95255 1503 aa28.13■■■□□ 2.09
CTSF-206ENST00000529199 EDC4Q6P2E9 1401 aaKnown RBP28.13■■■□□ 2.09
CTSF-206ENST00000529199 LTV1Q96GA3 475 aaPredicted RBP28.12■■■□□ 2.09
CTSF-206ENST00000529199 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
CTSF-206ENST00000529199 PUS7Q96PZ0 661 aaKnown RBP28.1■■■□□ 2.09
CTSF-206ENST00000529199 PTGER2P43116 358 aa28.08■■■□□ 2.09
CTSF-206ENST00000529199 IP6K1Q92551 441 aa28.08■■■□□ 2.09
CTSF-206ENST00000529199 ST20-MTHFSA0A0A6YYL1 179 aa28.07■■■□□ 2.08
CTSF-206ENST00000529199 DDX54Q8TDD1 881 aaKnown RBP28.07■■■□□ 2.08
CTSF-206ENST00000529199 CASZ1Q86V15 1759 aa28.05■■■□□ 2.08
CTSF-206ENST00000529199 COG3Q96JB2 828 aa28.05■■■□□ 2.08
CTSF-206ENST00000529199 LTN1O94822 1766 aa28.04■■■□□ 2.08
CTSF-206ENST00000529199 TESK2Q96S53 571 aa28.03■■■□□ 2.08
CTSF-206ENST00000529199 MTFR1LQ9H019 292 aa28.03■■■□□ 2.08
CTSF-206ENST00000529199 FBLN1P23142 703 aa28.02■■■□□ 2.08
CTSF-206ENST00000529199 USP54Q70EL1 1684 aa28.02■■■□□ 2.08
CTSF-206ENST00000529199 AMPHP49418 695 aa28.01■■■□□ 2.07
CTSF-206ENST00000529199 FHDC1Q9C0D6 1143 aaPredicted RBP28■■■□□ 2.07
CTSF-206ENST00000529199 NHSQ6T4R5 1651 aa28■■■□□ 2.07
CTSF-206ENST00000529199 KAT6BQ8WYB5 2073 aa27.99■■■□□ 2.07
CTSF-206ENST00000529199 MAP3K19Q56UN5 1328 aa27.98■■■□□ 2.07
CTSF-206ENST00000529199 SLC24A1O60721 1099 aa27.98■■■□□ 2.07
CTSF-206ENST00000529199 HOXC9P31274 260 aa27.98■■■□□ 2.07
CTSF-206ENST00000529199 SYTL4Q96C24 671 aaPredicted RBP27.98■■■□□ 2.07
CTSF-206ENST00000529199 SYT17Q9BSW7 474 aa27.98■■■□□ 2.07
CTSF-206ENST00000529199 LRRC4BQ9NT99 713 aa27.98■■■□□ 2.07
CTSF-206ENST00000529199 ZNF827Q17R98 1081 aa27.96■■■□□ 2.07
CTSF-206ENST00000529199 MYOM1P52179 1685 aa27.94■■■□□ 2.06
CTSF-206ENST00000529199 ARXQ96QS3 562 aa27.94■■■□□ 2.06
CTSF-206ENST00000529199 SGIP1Q9BQI5 828 aa27.94■■■□□ 2.06
CTSF-206ENST00000529199 PRIM1P49642 420 aaKnown RBP27.93■■■□□ 2.06
CTSF-206ENST00000529199 BTAF1O14981 1849 aa27.91■■■□□ 2.06
CTSF-206ENST00000529199 KCNQ4P56696 695 aa27.91■■■□□ 2.06
CTSF-206ENST00000529199 ZCRB1Q8TBF4 217 aaKnown RBP27.91■■■□□ 2.06
CTSF-206ENST00000529199 GGNBP2Q9H3C7 697 aa27.91■■■□□ 2.06
CTSF-206ENST00000529199 TMF1P82094 1093 aa27.9■■■□□ 2.06
CTSF-206ENST00000529199 RRS1Q15050 365 aaKnown RBP27.9■■■□□ 2.06
CTSF-206ENST00000529199 SLC27A3Q5K4L6 730 aa27.9■■■□□ 2.06
CTSF-206ENST00000529199 ANKRD36BQ8N2N9 1353 aa27.88■■■□□ 2.05
CTSF-206ENST00000529199 AKT1S1Q96B36 256 aa27.88■■■□□ 2.05
CTSF-206ENST00000529199 FYB1O15117 783 aa27.87■■■□□ 2.05
CTSF-206ENST00000529199 TFCP2L1Q9NZI6 479 aa27.87■■■□□ 2.05
CTSF-206ENST00000529199 NBPF6Q5VWK0 638 aa27.86■■■□□ 2.05
CTSF-206ENST00000529199 USHBP1Q8N6Y0 703 aa27.86■■■□□ 2.05
CTSF-206ENST00000529199 NBPF4Q96M43 638 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms