RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 YTHDC1Q96MU7 727 aaKnown RBP33.05■■■□□ 2.88
LDLRAD3-203ENST00000528989 U2SURPO15042 1029 aaKnown RBP33.04■■■□□ 2.88
LDLRAD3-203ENST00000528989 LTV1Q96GA3 475 aaPredicted RBP33.04■■■□□ 2.88
LDLRAD3-203ENST00000528989 KIF24Q5T7B8 1368 aa33.03■■■□□ 2.88
LDLRAD3-203ENST00000528989 CPDO75976 1380 aa33.02■■■□□ 2.88
LDLRAD3-203ENST00000528989 NUTM2BA6NNL0 878 aaPredicted RBP33.02■■■□□ 2.88
LDLRAD3-203ENST00000528989 NUTM2EB1AL46 878 aaPredicted RBP33.02■■■□□ 2.88
LDLRAD3-203ENST00000528989 NUTM2AQ8IVF1 878 aaPredicted RBP33.02■■■□□ 2.88
LDLRAD3-203ENST00000528989 PRDM11Q9NQV5 511 aa33.02■■■□□ 2.88
LDLRAD3-203ENST00000528989 COL22A1Q8NFW1 1626 aaPredicted RBP33.01■■■□□ 2.87
LDLRAD3-203ENST00000528989 RTL1A6NKG5 1358 aa33.01■■■□□ 2.87
LDLRAD3-203ENST00000528989 SHPRHQ149N8 1683 aa33.01■■■□□ 2.87
LDLRAD3-203ENST00000528989 U2AF1L5P0DN76 240 aaPredicted RBP33.01■■■□□ 2.87
LDLRAD3-203ENST00000528989 U2AF1Q01081 240 aaKnown RBP eCLIP33.01■■■□□ 2.87
LDLRAD3-203ENST00000528989 ABCA3Q99758 1704 aa33.01■■■□□ 2.87
LDLRAD3-203ENST00000528989 SENP3-EIF4A1A0A087X0R7 540 aa33■■■□□ 2.87
LDLRAD3-203ENST00000528989 FAM83GA6ND36 823 aa33■■■□□ 2.87
LDLRAD3-203ENST00000528989 NUDCQ9Y266 331 aa33■■■□□ 2.87
LDLRAD3-203ENST00000528989 JCADQ9P266 1359 aa33■■■□□ 2.87
LDLRAD3-203ENST00000528989 ADAMTS2O95450 1211 aa32.98■■■□□ 2.87
LDLRAD3-203ENST00000528989 HMOX1P09601 288 aa32.94■■■□□ 2.86
LDLRAD3-203ENST00000528989 CCDC146Q8IYE0 955 aa32.94■■■□□ 2.86
LDLRAD3-203ENST00000528989 ANKRD24Q8TF21 1146 aa32.93■■■□□ 2.86
LDLRAD3-203ENST00000528989 EYA1Q99502 592 aa32.93■■■□□ 2.86
LDLRAD3-203ENST00000528989 COL18A1P39060 1754 aa32.91■■■□□ 2.86
LDLRAD3-203ENST00000528989 BLMP54132 1417 aaPredicted RBP32.9■■■□□ 2.86
LDLRAD3-203ENST00000528989 AEBP1Q8IUX7 1158 aa32.9■■■□□ 2.86
LDLRAD3-203ENST00000528989 RGPD5Q99666 1765 aa32.89■■■□□ 2.86
LDLRAD3-203ENST00000528989 ERBB3P21860 1342 aa32.89■■■□□ 2.86
LDLRAD3-203ENST00000528989 NBPF6Q5VWK0 638 aa32.88■■■□□ 2.85
LDLRAD3-203ENST00000528989 NBPF4Q96M43 638 aa32.88■■■□□ 2.85
LDLRAD3-203ENST00000528989 CAMTA1Q9Y6Y1 1673 aa32.88■■■□□ 2.85
LDLRAD3-203ENST00000528989 SULT6B1Q6IMI4 303 aa32.88■■■□□ 2.85
LDLRAD3-203ENST00000528989 USHBP1Q8N6Y0 703 aa32.87■■■□□ 2.85
LDLRAD3-203ENST00000528989 BTG4Q9NY30 223 aa32.86■■■□□ 2.85
LDLRAD3-203ENST00000528989 RSPH6AQ9H0K4 717 aa32.85■■■□□ 2.85
LDLRAD3-203ENST00000528989 HNRNPUQ00839 825 aaKnown RBP eCLIP32.84■■■□□ 2.85
LDLRAD3-203ENST00000528989 SPATA31A6Q5VVP1 1343 aa32.84■■■□□ 2.85
LDLRAD3-203ENST00000528989 IGSF1Q8N6C5 1336 aa32.84■■■□□ 2.85
LDLRAD3-203ENST00000528989 FBXO41Q8TF61 875 aa32.84■■■□□ 2.85
LDLRAD3-203ENST00000528989 FCHSD2O94868 740 aa32.83■■■□□ 2.85
LDLRAD3-203ENST00000528989 PLEKHF1Q96S99 279 aa32.83■■■□□ 2.85
LDLRAD3-203ENST00000528989 CSB-PGBD3P0DP91 1061 aa32.82■■■□□ 2.85
LDLRAD3-203ENST00000528989 STRN4Q9NRL3 753 aa32.82■■■□□ 2.85
LDLRAD3-203ENST00000528989 PRKAR2BP31323 418 aa32.82■■■□□ 2.84
LDLRAD3-203ENST00000528989 LMO7Q8WWI1 1683 aa32.82■■■□□ 2.84
LDLRAD3-203ENST00000528989 RGPD1P0DJD0 1748 aa32.8■■■□□ 2.84
LDLRAD3-203ENST00000528989 ABCC6O95255 1503 aa32.8■■■□□ 2.84
LDLRAD3-203ENST00000528989 LRP6O75581 1613 aa32.8■■■□□ 2.84
LDLRAD3-203ENST00000528989 NLRP2Q9NX02 1062 aa32.8■■■□□ 2.84
LDLRAD3-203ENST00000528989 RUNDC1Q96C34 613 aa32.79■■■□□ 2.84
LDLRAD3-203ENST00000528989 SALL2Q9Y467 1007 aaPredicted RBP32.79■■■□□ 2.84
LDLRAD3-203ENST00000528989 COL5A2P05997 1499 aaPredicted RBP32.79■■■□□ 2.84
LDLRAD3-203ENST00000528989 APAF1O14727 1248 aa32.78■■■□□ 2.84
LDLRAD3-203ENST00000528989 EVA1CP58658 441 aa32.78■■■□□ 2.84
LDLRAD3-203ENST00000528989 PHACTR3Q96KR7 559 aa32.78■■■□□ 2.84
LDLRAD3-203ENST00000528989 C8orf37Q96NL8 207 aa32.78■■■□□ 2.84
LDLRAD3-203ENST00000528989 LARP1Q6PKG0 1096 aaKnown RBP32.77■■■□□ 2.84
LDLRAD3-203ENST00000528989 RGPD2P0DJD1 1756 aa32.76■■■□□ 2.83
LDLRAD3-203ENST00000528989 WDR17Q8IZU2 1322 aa32.75■■■□□ 2.83
LDLRAD3-203ENST00000528989 KDRP35968 1356 aa32.74■■■□□ 2.83
LDLRAD3-203ENST00000528989 COL14A1Q05707 1796 aaKnown RBP32.74■■■□□ 2.83
LDLRAD3-203ENST00000528989 TOM1L2Q6ZVM7 507 aa32.74■■■□□ 2.83
LDLRAD3-203ENST00000528989 TCP11L2Q8N4U5 519 aa32.74■■■□□ 2.83
LDLRAD3-203ENST00000528989 NGLY1Q96IV0 654 aa32.74■■■□□ 2.83
LDLRAD3-203ENST00000528989 RRP7AQ9Y3A4 280 aaKnown RBP32.73■■■□□ 2.83
LDLRAD3-203ENST00000528989 NEUROD2Q15784 382 aa32.71■■■□□ 2.83
LDLRAD3-203ENST00000528989 PNNQ9H307 717 aaKnown RBP32.71■■■□□ 2.83
LDLRAD3-203ENST00000528989 USP35Q9P2H5 1018 aa32.69■■■□□ 2.82
LDLRAD3-203ENST00000528989 MAPK8IP3Q9UPT6 1336 aa32.69■■■□□ 2.82
LDLRAD3-203ENST00000528989 MEX3CQ5U5Q3 659 aaKnown RBP32.69■■■□□ 2.82
LDLRAD3-203ENST00000528989 SLIT2O94813 1529 aa32.66■■■□□ 2.82
LDLRAD3-203ENST00000528989 NCAPD2Q15021 1401 aa32.66■■■□□ 2.82
LDLRAD3-203ENST00000528989 PLCH1Q4KWH8 1693 aa32.65■■■□□ 2.82
LDLRAD3-203ENST00000528989 NEFMP07197 916 aa32.64■■■□□ 2.82
LDLRAD3-203ENST00000528989 TMPOP42166 694 aaKnown RBP32.64■■■□□ 2.82
LDLRAD3-203ENST00000528989 CARD10Q9BWT7 1032 aa32.64■■■□□ 2.82
LDLRAD3-203ENST00000528989 FNBP4Q8N3X1 1017 aaPredicted RBP32.63■■■□□ 2.81
LDLRAD3-203ENST00000528989 CRB1P82279 1406 aa32.62■■■□□ 2.81
LDLRAD3-203ENST00000528989 BCL9LQ86UU0 1499 aa32.62■■■□□ 2.81
LDLRAD3-203ENST00000528989 UNC5CLQ8IV45 518 aa32.61■■■□□ 2.81
LDLRAD3-203ENST00000528989 MTHFSDQ2M296 383 aaKnown RBP32.61■■■□□ 2.81
LDLRAD3-203ENST00000528989 RIPK4P57078 832 aa32.59■■■□□ 2.81
LDLRAD3-203ENST00000528989 FAM208AQ9UK61 1670 aaKnown RBP32.59■■■□□ 2.81
LDLRAD3-203ENST00000528989 RAPGEF4Q8WZA2 1011 aa32.59■■■□□ 2.81
LDLRAD3-203ENST00000528989 ZBED9Q6R2W3 1325 aa32.58■■■□□ 2.81
LDLRAD3-203ENST00000528989 NFE2L2Q16236 605 aa32.58■■■□□ 2.81
LDLRAD3-203ENST00000528989 USP21Q9UK80 565 aa32.58■■■□□ 2.81
LDLRAD3-203ENST00000528989 MEGF6O75095 1541 aa32.56■■■□□ 2.8
LDLRAD3-203ENST00000528989 NRAPQ86VF7 1730 aa32.55■■■□□ 2.8
LDLRAD3-203ENST00000528989 AFF2P51816 1311 aa32.55■■■□□ 2.8
LDLRAD3-203ENST00000528989 CCDC9Q9Y3X0 531 aaKnown RBP32.55■■■□□ 2.8
LDLRAD3-203ENST00000528989 TRIM35Q9UPQ4 493 aa32.54■■■□□ 2.8
LDLRAD3-203ENST00000528989 TATP17735 454 aaPredicted RBP32.53■■■□□ 2.8
LDLRAD3-203ENST00000528989 WWC1Q8IX03 1113 aa32.53■■■□□ 2.8
LDLRAD3-203ENST00000528989 NWD2Q9ULI1 1742 aa32.53■■■□□ 2.8
LDLRAD3-203ENST00000528989 SPATA31A1Q5TZJ5 1347 aa32.53■■■□□ 2.8
LDLRAD3-203ENST00000528989 SPATA31A5Q5VU36 1347 aa32.51■■■□□ 2.8
LDLRAD3-203ENST00000528989 SPATA31A7Q8IWB4 1347 aa32.51■■■□□ 2.8
LDLRAD3-203ENST00000528989 IL2RBP14784 551 aa32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms