RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 MARCH10Q8NA82 808 aaPredicted RBP26.09■■□□□ 1.77
LTBP3-211ENST00000528966 SYT17Q9BSW7 474 aa26.09■■□□□ 1.77
LTBP3-211ENST00000528966 FHDC1Q9C0D6 1143 aaPredicted RBP26.09■■□□□ 1.77
LTBP3-211ENST00000528966 SENP3-EIF4A1A0A087X0R7 540 aa26.08■■□□□ 1.77
LTBP3-211ENST00000528966 ZBTB7CA1YPR0 619 aa26.08■■□□□ 1.77
LTBP3-211ENST00000528966 SLIT3O75094 1523 aa26.08■■□□□ 1.77
LTBP3-211ENST00000528966 RAB3GAP2Q9H2M9 1393 aa26.07■■□□□ 1.76
LTBP3-211ENST00000528966 PPIP5K1Q6PFW1 1433 aa26.07■■□□□ 1.76
LTBP3-211ENST00000528966 TOM1L2Q6ZVM7 507 aa26.06■■□□□ 1.76
LTBP3-211ENST00000528966 TXNRD1Q16881 649 aa26.05■■□□□ 1.76
LTBP3-211ENST00000528966 SGIP1Q9BQI5 828 aa26.05■■□□□ 1.76
LTBP3-211ENST00000528966 C1QTNF8P60827 252 aa26.04■■□□□ 1.76
LTBP3-211ENST00000528966 SLC15A2Q16348 729 aa26.04■■□□□ 1.76
LTBP3-211ENST00000528966 STK32BQ9NY57 414 aa26.04■■□□□ 1.76
LTBP3-211ENST00000528966 BRD4O60885 1362 aaPredicted RBP26.03■■□□□ 1.76
LTBP3-211ENST00000528966 AXIN2Q9Y2T1 843 aa26.02■■□□□ 1.76
LTBP3-211ENST00000528966 WDR17Q8IZU2 1322 aa26.02■■□□□ 1.76
LTBP3-211ENST00000528966 KIAA1210Q9ULL0 1709 aa26.02■■□□□ 1.76
LTBP3-211ENST00000528966 RGPD5Q99666 1765 aa26.02■■□□□ 1.76
LTBP3-211ENST00000528966 PIK3C2AO00443 1686 aa26.01■■□□□ 1.75
LTBP3-211ENST00000528966 USP6P35125 1406 aa26.01■■□□□ 1.75
LTBP3-211ENST00000528966 NLRP6P59044 892 aa26.01■■□□□ 1.75
LTBP3-211ENST00000528966 MTFR1LQ9H019 292 aa26.01■■□□□ 1.75
LTBP3-211ENST00000528966 SRPK2P78362 688 aaKnown RBP25.99■■□□□ 1.75
LTBP3-211ENST00000528966 CDCA7Q9BWT1 371 aaPredicted RBP25.99■■□□□ 1.75
LTBP3-211ENST00000528966 CEP350Q5VT06 3117 aa25.99■■□□□ 1.75
LTBP3-211ENST00000528966 GOLGB1Q14789 3259 aaKnown RBP25.99■■□□□ 1.75
LTBP3-211ENST00000528966 CABP2Q9NPB3 220 aa25.98■■□□□ 1.75
LTBP3-211ENST00000528966 CPSF1Q10570 1443 aaKnown RBP25.97■■□□□ 1.75
LTBP3-211ENST00000528966 PAPPAQ13219 1627 aa25.96■■□□□ 1.75
LTBP3-211ENST00000528966 NHSQ6T4R5 1651 aa25.94■■□□□ 1.74
LTBP3-211ENST00000528966 NBPF1Q3BBV0 1214 aa25.94■■□□□ 1.74
LTBP3-211ENST00000528966 CARD10Q9BWT7 1032 aa25.94■■□□□ 1.74
LTBP3-211ENST00000528966 MAP3K5Q99683 1374 aa25.94■■□□□ 1.74
LTBP3-211ENST00000528966 ARXQ96QS3 562 aa25.93■■□□□ 1.74
LTBP3-211ENST00000528966 CABP1Q9NZU7 370 aa25.93■■□□□ 1.74
LTBP3-211ENST00000528966 QRICH2Q9H0J4 1663 aa25.93■■□□□ 1.74
LTBP3-211ENST00000528966 IFFO2Q5TF58 517 aa25.92■■□□□ 1.74
LTBP3-211ENST00000528966 ARHGEF25Q86VW2 580 aa25.91■■□□□ 1.74
LTBP3-211ENST00000528966 CENPJQ9HC77 1338 aaPredicted RBP25.9■■□□□ 1.74
LTBP3-211ENST00000528966 TNS2Q63HR2 1409 aa25.9■■□□□ 1.74
LTBP3-211ENST00000528966 TRPM1Q7Z4N2 1603 aa25.9■■□□□ 1.74
LTBP3-211ENST00000528966 EXOC5O00471 708 aa25.9■■□□□ 1.74
LTBP3-211ENST00000528966 CSB-PGBD3P0DP91 1061 aa25.87■■□□□ 1.73
LTBP3-211ENST00000528966 BTAF1O14981 1849 aa25.86■■□□□ 1.73
LTBP3-211ENST00000528966 CCDC7Q96M83 1385 aa25.84■■□□□ 1.73
LTBP3-211ENST00000528966 NFAT5O94916 1531 aa25.84■■□□□ 1.73
LTBP3-211ENST00000528966 ABCC6O95255 1503 aa25.84■■□□□ 1.73
LTBP3-211ENST00000528966 ZNF827Q17R98 1081 aa25.84■■□□□ 1.73
LTBP3-211ENST00000528966 ACSBG1Q96GR2 724 aa25.84■■□□□ 1.73
LTBP3-211ENST00000528966 SOX12O15370 315 aa25.83■■□□□ 1.73
LTBP3-211ENST00000528966 GIGYF1O75420 1035 aaPredicted RBP25.83■■□□□ 1.73
LTBP3-211ENST00000528966 GPR162Q16538 588 aa25.83■■□□□ 1.73
LTBP3-211ENST00000528966 KCNH5Q8NCM2 988 aa25.83■■□□□ 1.73
LTBP3-211ENST00000528966 KAT6BQ8WYB5 2073 aa25.83■■□□□ 1.72
LTBP3-211ENST00000528966 COL24A1Q17RW2 1714 aa25.81■■□□□ 1.72
LTBP3-211ENST00000528966 SHANK3Q9BYB0 1731 aa25.81■■□□□ 1.72
LTBP3-211ENST00000528966 TTC21BQ7Z4L5 1316 aa25.81■■□□□ 1.72
LTBP3-211ENST00000528966 LRRC4BQ9NT99 713 aa25.8■■□□□ 1.72
LTBP3-211ENST00000528966 QSER1Q2KHR3 1735 aa25.79■■□□□ 1.72
LTBP3-211ENST00000528966 TUBGCP6Q96RT7 1819 aa25.75■■□□□ 1.71
LTBP3-211ENST00000528966 TTC21AQ8NDW8 1320 aa25.74■■□□□ 1.71
LTBP3-211ENST00000528966 KLHL34Q8N239 644 aa25.74■■□□□ 1.71
LTBP3-211ENST00000528966 AKT1S1Q96B36 256 aa25.74■■□□□ 1.71
LTBP3-211ENST00000528966 ZNF692Q9BU19 519 aaPredicted RBP25.73■■□□□ 1.71
LTBP3-211ENST00000528966 ERBB3P21860 1342 aa25.72■■□□□ 1.71
LTBP3-211ENST00000528966 EVC2Q86UK5 1308 aa25.72■■□□□ 1.71
LTBP3-211ENST00000528966 PELP1Q8IZL8 1130 aaKnown RBP25.72■■□□□ 1.71
LTBP3-211ENST00000528966 SLC16A10Q8TF71 515 aa25.72■■□□□ 1.71
LTBP3-211ENST00000528966 NLGN2Q8NFZ4 835 aa25.71■■□□□ 1.71
LTBP3-211ENST00000528966 PNPLA7Q6ZV29 1317 aa25.7■■□□□ 1.71
LTBP3-211ENST00000528966 IL2RBP14784 551 aa25.7■■□□□ 1.7
LTBP3-211ENST00000528966 LTN1O94822 1766 aa25.69■■□□□ 1.7
LTBP3-211ENST00000528966 POLD1P28340 1107 aa25.69■■□□□ 1.7
LTBP3-211ENST00000528966 NLRP2Q9NX02 1062 aa25.69■■□□□ 1.7
LTBP3-211ENST00000528966 MON2Q7Z3U7 1717 aa25.68■■□□□ 1.7
LTBP3-211ENST00000528966 USP54Q70EL1 1684 aa25.67■■□□□ 1.7
LTBP3-211ENST00000528966 KTN1Q86UP2 1357 aaKnown RBP25.66■■□□□ 1.7
LTBP3-211ENST00000528966 YBX3P16989 372 aaKnown RBP eCLIP25.65■■□□□ 1.7
LTBP3-211ENST00000528966 SLC27A3Q5K4L6 730 aa25.65■■□□□ 1.7
LTBP3-211ENST00000528966 KCNQ4P56696 695 aa25.63■■□□□ 1.69
LTBP3-211ENST00000528966 USP31Q70CQ4 1352 aa25.62■■□□□ 1.69
LTBP3-211ENST00000528966 TFCP2L1Q9NZI6 479 aa25.62■■□□□ 1.69
LTBP3-211ENST00000528966 LY75O60449 1722 aa25.61■■□□□ 1.69
LTBP3-211ENST00000528966 ANKRD24Q8TF21 1146 aa25.61■■□□□ 1.69
LTBP3-211ENST00000528966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.59■■□□□ 1.69
LTBP3-211ENST00000528966 ATP10DQ9P241 1426 aa25.58■■□□□ 1.69
LTBP3-211ENST00000528966 GRIN3BO60391 1043 aa25.58■■□□□ 1.69
LTBP3-211ENST00000528966 DOT1LQ8TEK3 1739 aa25.57■■□□□ 1.68
LTBP3-211ENST00000528966 NME9Q86XW9 330 aa25.57■■□□□ 1.68
LTBP3-211ENST00000528966 DDX54Q8TDD1 881 aaKnown RBP25.56■■□□□ 1.68
LTBP3-211ENST00000528966 NSD2O96028 1365 aa25.55■■□□□ 1.68
LTBP3-211ENST00000528966 SBNO2Q9Y2G9 1366 aa25.55■■□□□ 1.68
LTBP3-211ENST00000528966 CD163L1Q9NR16 1453 aa25.54■■□□□ 1.68
LTBP3-211ENST00000528966 PRIM1P49642 420 aaKnown RBP25.53■■□□□ 1.68
LTBP3-211ENST00000528966 ANKRD36BQ8N2N9 1353 aa25.53■■□□□ 1.68
LTBP3-211ENST00000528966 FAM208AQ9UK61 1670 aaKnown RBP25.52■■□□□ 1.68
LTBP3-211ENST00000528966 SYTL4Q96C24 671 aaPredicted RBP25.52■■□□□ 1.68
LTBP3-211ENST00000528966 L3MBTL2Q969R5 705 aa25.51■■□□□ 1.67
LTBP3-211ENST00000528966 COL23A1Q86Y22 540 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms