RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 DDB1Q16531 1140 aa18.01■□□□□ 0.47
TRIM3-207ENST00000528932 ROCK2O75116 1388 aaKnown RBP18.01■□□□□ 0.47
TRIM3-207ENST00000528932 TTC21BQ7Z4L5 1316 aa17.99■□□□□ 0.47
TRIM3-207ENST00000528932 CPSF1Q10570 1443 aaKnown RBP17.99■□□□□ 0.47
TRIM3-207ENST00000528932 CSB-PGBD3P0DP91 1061 aa17.99■□□□□ 0.47
TRIM3-207ENST00000528932 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
TRIM3-207ENST00000528932 PPP1R1BQ9UD71 204 aaPredicted RBP17.98■□□□□ 0.47
TRIM3-207ENST00000528932 RGPD3A6NKT7 1758 aaPredicted RBP17.97■□□□□ 0.47
TRIM3-207ENST00000528932 RGPD4Q7Z3J3 1758 aa17.97■□□□□ 0.47
TRIM3-207ENST00000528932 MARCH10Q8NA82 808 aaPredicted RBP17.97■□□□□ 0.47
TRIM3-207ENST00000528932 ARHGEF25Q86VW2 580 aa17.96■□□□□ 0.47
TRIM3-207ENST00000528932 SPON1Q9HCB6 807 aa17.96■□□□□ 0.47
TRIM3-207ENST00000528932 ANO8Q9HCE9 1232 aaPredicted RBP17.96■□□□□ 0.47
TRIM3-207ENST00000528932 C11orf95C9JLR9 678 aaPredicted RBP17.95■□□□□ 0.46
TRIM3-207ENST00000528932 KCNQ2O43526 872 aa17.95■□□□□ 0.46
TRIM3-207ENST00000528932 KCNH5Q8NCM2 988 aa17.95■□□□□ 0.46
TRIM3-207ENST00000528932 ZNF692Q9BU19 519 aaPredicted RBP17.95■□□□□ 0.46
TRIM3-207ENST00000528932 MON2Q7Z3U7 1717 aa17.95■□□□□ 0.46
TRIM3-207ENST00000528932 KTN1Q86UP2 1357 aaKnown RBP17.94■□□□□ 0.46
TRIM3-207ENST00000528932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRIM3-207ENST00000528932 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
TRIM3-207ENST00000528932 NFAT5O94916 1531 aa17.93■□□□□ 0.46
TRIM3-207ENST00000528932 TTC21AQ8NDW8 1320 aa17.93■□□□□ 0.46
TRIM3-207ENST00000528932 CASZ1Q86V15 1759 aa17.92■□□□□ 0.46
TRIM3-207ENST00000528932 PLSCR1O15162 318 aa17.92■□□□□ 0.46
TRIM3-207ENST00000528932 CARD10Q9BWT7 1032 aa17.92■□□□□ 0.46
TRIM3-207ENST00000528932 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
TRIM3-207ENST00000528932 LTN1O94822 1766 aa17.91■□□□□ 0.46
TRIM3-207ENST00000528932 PROM2Q8N271 834 aa17.91■□□□□ 0.46
TRIM3-207ENST00000528932 KAT6BQ8WYB5 2073 aa17.91■□□□□ 0.46
TRIM3-207ENST00000528932 YY1P25490 414 aa17.9■□□□□ 0.46
TRIM3-207ENST00000528932 CDCA7Q9BWT1 371 aaPredicted RBP17.9■□□□□ 0.46
TRIM3-207ENST00000528932 EXOC5O00471 708 aa17.89■□□□□ 0.45
TRIM3-207ENST00000528932 ZBTB7AO95365 584 aa17.89■□□□□ 0.45
TRIM3-207ENST00000528932 NME9Q86XW9 330 aa17.89■□□□□ 0.45
TRIM3-207ENST00000528932 TMC1Q8TDI8 760 aa17.89■□□□□ 0.45
TRIM3-207ENST00000528932 TXNRD1Q16881 649 aa17.87■□□□□ 0.45
TRIM3-207ENST00000528932 ACSBG1Q96GR2 724 aa17.87■□□□□ 0.45
TRIM3-207ENST00000528932 CARD11Q9BXL7 1154 aa17.86■□□□□ 0.45
TRIM3-207ENST00000528932 NLRP2Q9NX02 1062 aa17.86■□□□□ 0.45
TRIM3-207ENST00000528932 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
TRIM3-207ENST00000528932 CCDC7Q96M83 1385 aa17.86■□□□□ 0.45
TRIM3-207ENST00000528932 NINLQ9Y2I6 1382 aa17.86■□□□□ 0.45
TRIM3-207ENST00000528932 TNS2Q63HR2 1409 aa17.86■□□□□ 0.45
TRIM3-207ENST00000528932 MYOM1P52179 1685 aa17.86■□□□□ 0.45
TRIM3-207ENST00000528932 BCL9O00512 1426 aa17.85■□□□□ 0.45
TRIM3-207ENST00000528932 NHSQ6T4R5 1651 aa17.85■□□□□ 0.45
TRIM3-207ENST00000528932 CD163L1Q9NR16 1453 aa17.85■□□□□ 0.45
TRIM3-207ENST00000528932 STK32BQ9NY57 414 aa17.85■□□□□ 0.45
TRIM3-207ENST00000528932 USP54Q70EL1 1684 aa17.84■□□□□ 0.45
TRIM3-207ENST00000528932 DCAF8L1A6NGE4 600 aa17.84■□□□□ 0.45
TRIM3-207ENST00000528932 SLC12A5Q9H2X9 1139 aa17.84■□□□□ 0.45
TRIM3-207ENST00000528932 ABCC6O95255 1503 aa17.83■□□□□ 0.45
TRIM3-207ENST00000528932 USP31Q70CQ4 1352 aa17.83■□□□□ 0.45
TRIM3-207ENST00000528932 SBNO2Q9Y2G9 1366 aa17.83■□□□□ 0.45
TRIM3-207ENST00000528932 ERBB3P21860 1342 aa17.83■□□□□ 0.44
TRIM3-207ENST00000528932 BTAF1O14981 1849 aa17.82■□□□□ 0.44
TRIM3-207ENST00000528932 HDGFL2Q7Z4V5 671 aaPredicted RBP17.82■□□□□ 0.44
TRIM3-207ENST00000528932 SLC15A2Q16348 729 aa17.81■□□□□ 0.44
TRIM3-207ENST00000528932 ANKRD24Q8TF21 1146 aa17.81■□□□□ 0.44
TRIM3-207ENST00000528932 IL2RBP14784 551 aa17.8■□□□□ 0.44
TRIM3-207ENST00000528932 PTGER2P43116 358 aa17.8■□□□□ 0.44
TRIM3-207ENST00000528932 LTV1Q96GA3 475 aaPredicted RBP17.79■□□□□ 0.44
TRIM3-207ENST00000528932 A0A1W2PP64 1363 aa17.79■□□□□ 0.44
TRIM3-207ENST00000528932 EDC4Q6P2E9 1401 aaKnown RBP17.78■□□□□ 0.44
TRIM3-207ENST00000528932 RGPD2P0DJD1 1756 aa17.76■□□□□ 0.43
TRIM3-207ENST00000528932 FHDC1Q9C0D6 1143 aaPredicted RBP17.76■□□□□ 0.43
TRIM3-207ENST00000528932 TERF2IPQ9NYB0 399 aa17.76■□□□□ 0.43
TRIM3-207ENST00000528932 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
TRIM3-207ENST00000528932 PAPPAQ13219 1627 aa17.76■□□□□ 0.43
TRIM3-207ENST00000528932 DDX54Q8TDD1 881 aaKnown RBP17.75■□□□□ 0.43
TRIM3-207ENST00000528932 FBLN1P23142 703 aa17.74■□□□□ 0.43
TRIM3-207ENST00000528932 MTFR1LQ9H019 292 aa17.74■□□□□ 0.43
TRIM3-207ENST00000528932 ZNF827Q17R98 1081 aa17.73■□□□□ 0.43
TRIM3-207ENST00000528932 SYT17Q9BSW7 474 aa17.73■□□□□ 0.43
TRIM3-207ENST00000528932 FAM208AQ9UK61 1670 aaKnown RBP17.72■□□□□ 0.43
TRIM3-207ENST00000528932 IP6K1Q92551 441 aa17.72■□□□□ 0.43
TRIM3-207ENST00000528932 LRRC4BQ9NT99 713 aa17.72■□□□□ 0.43
TRIM3-207ENST00000528932 SGIP1Q9BQI5 828 aa17.71■□□□□ 0.43
TRIM3-207ENST00000528932 DOT1LQ8TEK3 1739 aa17.71■□□□□ 0.43
TRIM3-207ENST00000528932 ST20-MTHFSA0A0A6YYL1 179 aa17.7■□□□□ 0.42
TRIM3-207ENST00000528932 KCNQ4P56696 695 aa17.7■□□□□ 0.42
TRIM3-207ENST00000528932 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
TRIM3-207ENST00000528932 TUBGCP6Q96RT7 1819 aa17.7■□□□□ 0.42
TRIM3-207ENST00000528932 AMPHP49418 695 aa17.69■□□□□ 0.42
TRIM3-207ENST00000528932 KLHL34Q8N239 644 aa17.69■□□□□ 0.42
TRIM3-207ENST00000528932 COG3Q96JB2 828 aa17.69■□□□□ 0.42
TRIM3-207ENST00000528932 ARXQ96QS3 562 aa17.69■□□□□ 0.42
TRIM3-207ENST00000528932 SHANK3Q9BYB0 1731 aa17.69■□□□□ 0.42
TRIM3-207ENST00000528932 MAP3K19Q56UN5 1328 aa17.69■□□□□ 0.42
TRIM3-207ENST00000528932 CHD4Q14839 1912 aa17.68■□□□□ 0.42
TRIM3-207ENST00000528932 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
TRIM3-207ENST00000528932 TESK2Q96S53 571 aa17.68■□□□□ 0.42
TRIM3-207ENST00000528932 HOXC9P31274 260 aa17.67■□□□□ 0.42
TRIM3-207ENST00000528932 PRIM1P49642 420 aaKnown RBP17.66■□□□□ 0.42
TRIM3-207ENST00000528932 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
TRIM3-207ENST00000528932 QSER1Q2KHR3 1735 aa17.65■□□□□ 0.42
TRIM3-207ENST00000528932 RRS1Q15050 365 aaKnown RBP17.65■□□□□ 0.42
TRIM3-207ENST00000528932 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
TRIM3-207ENST00000528932 MEGF6O75095 1541 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms