RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 PNPLA6Q8IY17 1366 aa8.41□□□□□ -1.06
MACF1-228ENST00000528611 GCP02774 474 aa8.41□□□□□ -1.06
MACF1-228ENST00000528611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.41□□□□□ -1.06
MACF1-228ENST00000528611 SMG6Q86US8 1419 aaKnown RBP8.4□□□□□ -1.06
MACF1-228ENST00000528611 PLEKHG2Q9H7P9 1386 aa8.4□□□□□ -1.06
MACF1-228ENST00000528611 MYBBP1AQ9BQG0 1328 aaKnown RBP8.4□□□□□ -1.06
MACF1-228ENST00000528611 CCER2I3L3R5 266 aa8.4□□□□□ -1.06
MACF1-228ENST00000528611 NME9Q86XW9 330 aa8.4□□□□□ -1.06
MACF1-228ENST00000528611 CLEC11AQ9Y240 323 aa8.4□□□□□ -1.06
MACF1-228ENST00000528611 ARHGEF25Q86VW2 580 aa8.39□□□□□ -1.07
MACF1-228ENST00000528611 GGNBP2Q9H3C7 697 aa8.39□□□□□ -1.07
MACF1-228ENST00000528611 BLMP54132 1417 aaPredicted RBP8.38□□□□□ -1.07
MACF1-228ENST00000528611 CRYBG1Q9Y4K1 1723 aa8.38□□□□□ -1.07
MACF1-228ENST00000528611 CFAP53Q96M91 514 aa8.38□□□□□ -1.07
MACF1-228ENST00000528611 NFAT5O94916 1531 aa8.38□□□□□ -1.07
MACF1-228ENST00000528611 FLT4P35916 1363 aa8.37□□□□□ -1.07
MACF1-228ENST00000528611 PPP2R1AP30153 589 aa8.37□□□□□ -1.07
MACF1-228ENST00000528611 HSPA1LP34931 641 aa8.37□□□□□ -1.07
MACF1-228ENST00000528611 XPCQ01831 940 aaPredicted RBP8.37□□□□□ -1.07
MACF1-228ENST00000528611 CC2D1BQ5T0F9 858 aaKnown RBP8.37□□□□□ -1.07
MACF1-228ENST00000528611 LMOD2Q6P5Q4 547 aa8.37□□□□□ -1.07
MACF1-228ENST00000528611 IP6K1Q92551 441 aa8.37□□□□□ -1.07
MACF1-228ENST00000528611 DDX17Q92841 729 aaKnown RBP8.37□□□□□ -1.07
MACF1-228ENST00000528611 POLKQ9UBT6 870 aa8.37□□□□□ -1.07
MACF1-228ENST00000528611 SSUH2Q9Y2M2 353 aa8.37□□□□□ -1.07
MACF1-228ENST00000528611 CDK12Q9NYV4 1490 aaPredicted RBP8.37□□□□□ -1.07
MACF1-228ENST00000528611 MARF1Q9Y4F3 1742 aaKnown RBP8.37□□□□□ -1.07
MACF1-228ENST00000528611 ZBTB22O15209 634 aa8.36□□□□□ -1.07
MACF1-228ENST00000528611 HAP1P54257 671 aaPredicted RBP8.36□□□□□ -1.07
MACF1-228ENST00000528611 NUDCQ9Y266 331 aa8.36□□□□□ -1.07
MACF1-228ENST00000528611 PNNQ9H307 717 aaKnown RBP8.35□□□□□ -1.07
MACF1-228ENST00000528611 MAP2P11137 1827 aaKnown RBP8.35□□□□□ -1.07
MACF1-228ENST00000528611 ABCA3Q99758 1704 aa8.34□□□□□ -1.07
MACF1-228ENST00000528611 MAP3K19Q56UN5 1328 aa8.34□□□□□ -1.07
MACF1-228ENST00000528611 HOXC9P31274 260 aa8.34□□□□□ -1.07
MACF1-228ENST00000528611 AMPHP49418 695 aa8.34□□□□□ -1.07
MACF1-228ENST00000528611 MTHFSP49914 203 aa8.34□□□□□ -1.07
MACF1-228ENST00000528611 FNBP4Q8N3X1 1017 aaPredicted RBP8.34□□□□□ -1.07
MACF1-228ENST00000528611 PRDM11Q9NQV5 511 aa8.34□□□□□ -1.07
MACF1-228ENST00000528611 COL14A1Q05707 1796 aaKnown RBP8.34□□□□□ -1.07
MACF1-228ENST00000528611 NGEFQ8N5V2 710 aa8.33□□□□□ -1.08
MACF1-228ENST00000528611 NWD2Q9ULI1 1742 aa8.33□□□□□ -1.08
MACF1-228ENST00000528611 FAM208AQ9UK61 1670 aaKnown RBP8.33□□□□□ -1.08
MACF1-228ENST00000528611 KIAA0232Q92628 1395 aa8.33□□□□□ -1.08
MACF1-228ENST00000528611 DIAPH1O60610 1272 aaKnown RBP8.32□□□□□ -1.08
MACF1-228ENST00000528611 MKRN4PQ13434 485 aaPredicted RBP8.32□□□□□ -1.08
MACF1-228ENST00000528611 NUTM2GQ5VZR2 741 aa8.32□□□□□ -1.08
MACF1-228ENST00000528611 CDCA7Q9BWT1 371 aaPredicted RBP8.32□□□□□ -1.08
MACF1-228ENST00000528611 ZRANB1Q9UGI0 708 aa8.32□□□□□ -1.08
MACF1-228ENST00000528611 THRAP3Q9Y2W1 955 aaKnown RBP8.32□□□□□ -1.08
MACF1-228ENST00000528611 LMO7Q8WWI1 1683 aa8.32□□□□□ -1.08
MACF1-228ENST00000528611 SLIT2O94813 1529 aa8.32□□□□□ -1.08
MACF1-228ENST00000528611 LTN1O94822 1766 aa8.32□□□□□ -1.08
MACF1-228ENST00000528611 COL18A1P39060 1754 aa8.32□□□□□ -1.08
MACF1-228ENST00000528611 ERBB3P21860 1342 aa8.31□□□□□ -1.08
MACF1-228ENST00000528611 FAM83GA6ND36 823 aa8.31□□□□□ -1.08
MACF1-228ENST00000528611 FCHSD2O94868 740 aa8.31□□□□□ -1.08
MACF1-228ENST00000528611 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
MACF1-228ENST00000528611 WDR17Q8IZU2 1322 aa8.3□□□□□ -1.08
MACF1-228ENST00000528611 NCAPD2Q15021 1401 aa8.3□□□□□ -1.08
MACF1-228ENST00000528611 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.3□□□□□ -1.08
MACF1-228ENST00000528611 IL13P35225 146 aa8.3□□□□□ -1.08
MACF1-228ENST00000528611 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
MACF1-228ENST00000528611 RRS1Q15050 365 aaKnown RBP8.3□□□□□ -1.08
MACF1-228ENST00000528611 ZNF772Q68DY9 489 aaPredicted RBP8.3□□□□□ -1.08
MACF1-228ENST00000528611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.3□□□□□ -1.08
MACF1-228ENST00000528611 EMILIN1Q9Y6C2 1016 aa8.3□□□□□ -1.08
MACF1-228ENST00000528611 KDRP35968 1356 aa8.3□□□□□ -1.08
MACF1-228ENST00000528611 COL3A1P02461 1466 aaPredicted RBP8.3□□□□□ -1.08
MACF1-228ENST00000528611 IGSF1Q8N6C5 1336 aa8.29□□□□□ -1.08
MACF1-228ENST00000528611 HSP90AB2PQ58FF8 381 aa8.29□□□□□ -1.08
MACF1-228ENST00000528611 CHADLQ6NUI6 762 aa8.29□□□□□ -1.08
MACF1-228ENST00000528611 UNC5CLQ8IV45 518 aa8.29□□□□□ -1.08
MACF1-228ENST00000528611 PNISRQ8TF01 805 aaKnown RBP8.29□□□□□ -1.08
MACF1-228ENST00000528611 CARD10Q9BWT7 1032 aa8.29□□□□□ -1.08
MACF1-228ENST00000528611 COL5A2P05997 1499 aaPredicted RBP8.29□□□□□ -1.08
MACF1-228ENST00000528611 CRB1P82279 1406 aa8.29□□□□□ -1.08
MACF1-228ENST00000528611 CAMTA1Q9Y6Y1 1673 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 PPM1GO15355 546 aaPredicted RBP8.28□□□□□ -1.08
MACF1-228ENST00000528611 NEFMP07197 916 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 TNNT2P45379 298 aaPredicted RBP8.28□□□□□ -1.08
MACF1-228ENST00000528611 EVA1CP58658 441 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 EIF4A2Q14240 407 aaKnown RBP8.28□□□□□ -1.08
MACF1-228ENST00000528611 WDR43Q15061 677 aaKnown RBP eCLIP8.28□□□□□ -1.08
MACF1-228ENST00000528611 VPS72Q15906 364 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 BARGINQ6ZT62 677 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 ANKRD24Q8TF21 1146 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 NGLY1Q96IV0 654 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 MRS2Q9HD23 443 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 BTG4Q9NY30 223 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 AXIN2Q9Y2T1 843 aa8.28□□□□□ -1.08
MACF1-228ENST00000528611 BCL9LQ86UU0 1499 aa8.27□□□□□ -1.09
MACF1-228ENST00000528611 PEAK1Q9H792 1746 aa8.27□□□□□ -1.09
MACF1-228ENST00000528611 ONECUT3O60422 494 aaPredicted RBP8.27□□□□□ -1.09
MACF1-228ENST00000528611 MEX3CQ5U5Q3 659 aaKnown RBP8.27□□□□□ -1.09
MACF1-228ENST00000528611 TRPC5Q9UL62 973 aaPredicted RBP8.27□□□□□ -1.09
MACF1-228ENST00000528611 LRP6O75581 1613 aa8.27□□□□□ -1.09
MACF1-228ENST00000528611 RGPD1P0DJD0 1748 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 NUTM2BA6NNL0 878 aaPredicted RBP8.26□□□□□ -1.09
MACF1-228ENST00000528611 NUTM2EB1AL46 878 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms