RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 LILRB3O75022 631 aa13.66□□□□□ -0.22
COMMD9-205ENST00000528608 SMCPP49901 116 aaPredicted RBP13.66□□□□□ -0.22
COMMD9-205ENST00000528608 KDM4CQ9H3R0 1056 aa13.66□□□□□ -0.22
COMMD9-205ENST00000528608 IQGAP2Q13576 1575 aa13.66□□□□□ -0.22
COMMD9-205ENST00000528608 POTECB2RU33 542 aa13.65□□□□□ -0.22
COMMD9-205ENST00000528608 ZNF511Q8NB15 262 aa13.65□□□□□ -0.22
COMMD9-205ENST00000528608 MAP10Q9P2G4 905 aa13.65□□□□□ -0.22
COMMD9-205ENST00000528608 DACH1Q9UI36 760 aa13.64□□□□□ -0.23
COMMD9-205ENST00000528608 F12P00748 615 aaPredicted RBP13.63□□□□□ -0.23
COMMD9-205ENST00000528608 HELBQ8NG08 1087 aaPredicted RBP13.63□□□□□ -0.23
COMMD9-205ENST00000528608 HPS1Q92902 700 aa13.63□□□□□ -0.23
COMMD9-205ENST00000528608 PER1O15534 1290 aaPredicted RBP13.62□□□□□ -0.23
COMMD9-205ENST00000528608 SIAH2O43255 324 aa13.62□□□□□ -0.23
COMMD9-205ENST00000528608 CTTNBP2Q8WZ74 1663 aa13.62□□□□□ -0.23
COMMD9-205ENST00000528608 RTL5Q5HYW3 569 aaPredicted RBP13.61□□□□□ -0.23
COMMD9-205ENST00000528608 DDRGK1Q96HY6 314 aa13.61□□□□□ -0.23
COMMD9-205ENST00000528608 WASF2Q9Y6W5 498 aa13.61□□□□□ -0.23
COMMD9-205ENST00000528608 DISP1Q96F81 1524 aa13.6□□□□□ -0.23
COMMD9-205ENST00000528608 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
COMMD9-205ENST00000528608 FAM117AQ9C073 453 aa13.59□□□□□ -0.23
COMMD9-205ENST00000528608 ATP1B4Q9UN42 357 aaPredicted RBP13.59□□□□□ -0.23
COMMD9-205ENST00000528608 KIF21BO75037 1637 aa13.59□□□□□ -0.23
COMMD9-205ENST00000528608 VARSP26640 1264 aaKnown RBP13.58□□□□□ -0.24
COMMD9-205ENST00000528608 GMPR2Q9P2T1 348 aaKnown RBP13.58□□□□□ -0.24
COMMD9-205ENST00000528608 TLL2Q9Y6L7 1015 aa13.58□□□□□ -0.24
COMMD9-205ENST00000528608 SH3D19Q5HYK7 790 aa13.57□□□□□ -0.24
COMMD9-205ENST00000528608 ZNF775Q96BV0 537 aaPredicted RBP13.57□□□□□ -0.24
COMMD9-205ENST00000528608 TTBK1Q5TCY1 1321 aaPredicted RBP13.57□□□□□ -0.24
COMMD9-205ENST00000528608 SKIV2LQ15477 1246 aaKnown RBP13.56□□□□□ -0.24
COMMD9-205ENST00000528608 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
COMMD9-205ENST00000528608 ATP13A2Q9NQ11 1180 aa13.55□□□□□ -0.24
COMMD9-205ENST00000528608 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
COMMD9-205ENST00000528608 C11orf95C9JLR9 678 aaPredicted RBP13.54□□□□□ -0.24
COMMD9-205ENST00000528608 FOXJ1Q92949 421 aa13.54□□□□□ -0.24
COMMD9-205ENST00000528608 PTPRGP23470 1445 aa13.54□□□□□ -0.24
COMMD9-205ENST00000528608 KIAA0556O60303 1618 aa13.53□□□□□ -0.24
COMMD9-205ENST00000528608 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
COMMD9-205ENST00000528608 AGERQ15109 404 aa13.53□□□□□ -0.24
COMMD9-205ENST00000528608 FAM174AQ8TBP5 190 aa13.53□□□□□ -0.24
COMMD9-205ENST00000528608 RANGAP1P46060 587 aaPredicted RBP13.52□□□□□ -0.25
COMMD9-205ENST00000528608 ARMC2Q8NEN0 867 aa13.52□□□□□ -0.25
COMMD9-205ENST00000528608 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
COMMD9-205ENST00000528608 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
COMMD9-205ENST00000528608 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
COMMD9-205ENST00000528608 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
COMMD9-205ENST00000528608 BPHLQ86WA6 291 aaPredicted RBP13.49□□□□□ -0.25
COMMD9-205ENST00000528608 MPNDQ8N594 471 aa13.49□□□□□ -0.25
COMMD9-205ENST00000528608 PROCA1Q8NCQ7 364 aaPredicted RBP13.49□□□□□ -0.25
COMMD9-205ENST00000528608 CTDSPL2Q05D32 466 aa13.48□□□□□ -0.25
COMMD9-205ENST00000528608 SENP2Q9HC62 589 aa13.48□□□□□ -0.25
COMMD9-205ENST00000528608 CAPN5O15484 640 aaPredicted RBP13.47□□□□□ -0.25
COMMD9-205ENST00000528608 ARID5BQ14865 1188 aa13.47□□□□□ -0.25
COMMD9-205ENST00000528608 SAMD9Q5K651 1589 aa13.46□□□□□ -0.25
COMMD9-205ENST00000528608 NNTQ13423 1086 aa13.46□□□□□ -0.25
COMMD9-205ENST00000528608 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.25
COMMD9-205ENST00000528608 UACAQ9BZF9 1416 aa13.46□□□□□ -0.26
COMMD9-205ENST00000528608 NEUROD2Q15784 382 aa13.45□□□□□ -0.26
COMMD9-205ENST00000528608 C4orf48Q5BLP8 95 aa13.44□□□□□ -0.26
COMMD9-205ENST00000528608 PLB1Q6P1J6 1458 aa13.43□□□□□ -0.26
COMMD9-205ENST00000528608 ADH1CP00326 375 aa13.43□□□□□ -0.26
COMMD9-205ENST00000528608 FBXO31Q5XUX0 539 aaPredicted RBP13.43□□□□□ -0.26
COMMD9-205ENST00000528608 PPP2R2DQ66LE6 453 aa13.43□□□□□ -0.26
COMMD9-205ENST00000528608 TRIM47Q96LD4 638 aa13.43□□□□□ -0.26
COMMD9-205ENST00000528608 UHRF1BP1LA0JNW5 1464 aa13.42□□□□□ -0.26
COMMD9-205ENST00000528608 BMP1P13497 986 aa13.42□□□□□ -0.26
COMMD9-205ENST00000528608 LRRN4Q8WUT4 740 aa13.42□□□□□ -0.26
COMMD9-205ENST00000528608 KIFC2Q96AC6 838 aa13.42□□□□□ -0.26
COMMD9-205ENST00000528608 FHOD3Q2V2M9 1422 aa13.41□□□□□ -0.26
COMMD9-205ENST00000528608 ABCC2Q92887 1545 aa13.41□□□□□ -0.26
COMMD9-205ENST00000528608 AP1G2O75843 785 aa13.41□□□□□ -0.26
COMMD9-205ENST00000528608 SNRPBP14678 240 aaKnown RBP13.41□□□□□ -0.26
COMMD9-205ENST00000528608 CDK15Q96Q40 435 aa13.41□□□□□ -0.26
COMMD9-205ENST00000528608 ABCA8O94911 1581 aa13.41□□□□□ -0.26
COMMD9-205ENST00000528608 MAGEB6P1A0A0J9YX57 407 aa13.4□□□□□ -0.26
COMMD9-205ENST00000528608 GPKOWQ92917 476 aaPredicted RBP eCLIP13.4□□□□□ -0.26
COMMD9-205ENST00000528608 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
COMMD9-205ENST00000528608 SH3RF1Q7Z6J0 888 aa13.39□□□□□ -0.27
COMMD9-205ENST00000528608 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
COMMD9-205ENST00000528608 LOC105371045A0A1W2PR82 267 aa13.38□□□□□ -0.27
COMMD9-205ENST00000528608 WDR4P57081 412 aaKnown RBP13.38□□□□□ -0.27
COMMD9-205ENST00000528608 TRIM46Q7Z4K8 759 aa13.38□□□□□ -0.27
COMMD9-205ENST00000528608 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
COMMD9-205ENST00000528608 C1QTNF2Q9BXJ5 285 aa13.37□□□□□ -0.27
COMMD9-205ENST00000528608 EFCAB5A4FU69 1503 aa13.37□□□□□ -0.27
COMMD9-205ENST00000528608 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
COMMD9-205ENST00000528608 KDM5BQ9UGL1 1544 aa13.37□□□□□ -0.27
COMMD9-205ENST00000528608 TIMP2P16035 220 aa13.36□□□□□ -0.27
COMMD9-205ENST00000528608 NR5A1Q13285 461 aa13.36□□□□□ -0.27
COMMD9-205ENST00000528608 NR6A1Q15406 480 aa13.36□□□□□ -0.27
COMMD9-205ENST00000528608 FKBPLQ9UIM3 349 aa13.36□□□□□ -0.27
COMMD9-205ENST00000528608 ARID3CA6NKF2 412 aa13.35□□□□□ -0.27
COMMD9-205ENST00000528608 PCMTD1Q96MG8 357 aaPredicted RBP13.35□□□□□ -0.27
COMMD9-205ENST00000528608 ZCCHC11Q5TAX3 1644 aaKnown RBP13.35□□□□□ -0.27
COMMD9-205ENST00000528608 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
COMMD9-205ENST00000528608 KIF13AQ9H1H9 1805 aa13.34□□□□□ -0.27
COMMD9-205ENST00000528608 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
COMMD9-205ENST00000528608 FSHRP23945 695 aa13.33□□□□□ -0.28
COMMD9-205ENST00000528608 TREML4Q6UXN2 200 aa13.33□□□□□ -0.28
COMMD9-205ENST00000528608 VASH1Q7L8A9 365 aaPredicted RBP13.33□□□□□ -0.28
COMMD9-205ENST00000528608 TRMT44Q8IYL2 757 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms