RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 COL5A2P05997 1499 aaPredicted RBP18.46■□□□□ 0.54
CAPN1-215ENST00000528396 USP54Q70EL1 1684 aa18.45■□□□□ 0.54
CAPN1-215ENST00000528396 FYB1O15117 783 aa18.44■□□□□ 0.54
CAPN1-215ENST00000528396 ONECUT3O60422 494 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-215ENST00000528396 TCP11L2Q8N4U5 519 aa18.44■□□□□ 0.54
CAPN1-215ENST00000528396 CGNL1Q0VF96 1302 aa18.44■□□□□ 0.54
CAPN1-215ENST00000528396 CRB1P82279 1406 aa18.43■□□□□ 0.54
CAPN1-215ENST00000528396 KRT27Q7Z3Y8 459 aa18.43■□□□□ 0.54
CAPN1-215ENST00000528396 CARD14Q9BXL6 1004 aa18.43■□□□□ 0.54
CAPN1-215ENST00000528396 AXIN2Q9Y2T1 843 aa18.43■□□□□ 0.54
CAPN1-215ENST00000528396 UPF1Q92900 1129 aaKnown RBP eCLIP18.42■□□□□ 0.54
CAPN1-215ENST00000528396 WDR17Q8IZU2 1322 aa18.42■□□□□ 0.54
CAPN1-215ENST00000528396 ABCC6O95255 1503 aa18.41■□□□□ 0.54
CAPN1-215ENST00000528396 AMPHP49418 695 aa18.41■□□□□ 0.54
CAPN1-215ENST00000528396 PANK3Q9H999 370 aa18.41■□□□□ 0.54
CAPN1-215ENST00000528396 THRAP3Q9Y2W1 955 aaKnown RBP18.41■□□□□ 0.54
CAPN1-215ENST00000528396 KIF20BQ96Q89 1820 aa18.4■□□□□ 0.54
CAPN1-215ENST00000528396 C11orf95C9JLR9 678 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-215ENST00000528396 BARGINQ6ZT62 677 aa18.4■□□□□ 0.54
CAPN1-215ENST00000528396 LTN1O94822 1766 aa18.4■□□□□ 0.54
CAPN1-215ENST00000528396 KIF7Q2M1P5 1343 aa18.39■□□□□ 0.53
CAPN1-215ENST00000528396 COL18A1P39060 1754 aa18.39■□□□□ 0.53
CAPN1-215ENST00000528396 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
CAPN1-215ENST00000528396 NLRP2Q9NX02 1062 aa18.38■□□□□ 0.53
CAPN1-215ENST00000528396 SRCAPQ6ZRS2 3230 aa18.38■□□□□ 0.53
CAPN1-215ENST00000528396 ANKRD24Q8TF21 1146 aa18.37■□□□□ 0.53
CAPN1-215ENST00000528396 IP6K1Q92551 441 aa18.37■□□□□ 0.53
CAPN1-215ENST00000528396 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
CAPN1-215ENST00000528396 MAP3K19Q56UN5 1328 aa18.37■□□□□ 0.53
CAPN1-215ENST00000528396 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
CAPN1-215ENST00000528396 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-215ENST00000528396 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
CAPN1-215ENST00000528396 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-215ENST00000528396 RGPD5Q99666 1765 aa18.36■□□□□ 0.53
CAPN1-215ENST00000528396 CARD10Q9BWT7 1032 aa18.36■□□□□ 0.53
CAPN1-215ENST00000528396 THSD7AQ9UPZ6 1657 aa18.35■□□□□ 0.53
CAPN1-215ENST00000528396 ERBB3P21860 1342 aa18.35■□□□□ 0.53
CAPN1-215ENST00000528396 FBLN1P23142 703 aa18.35■□□□□ 0.53
CAPN1-215ENST00000528396 RRS1Q15050 365 aaKnown RBP18.35■□□□□ 0.53
CAPN1-215ENST00000528396 CDCA7Q9BWT1 371 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-215ENST00000528396 CCDC7Q96M83 1385 aa18.34■□□□□ 0.53
CAPN1-215ENST00000528396 CCDC125Q86Z20 511 aa18.34■□□□□ 0.53
CAPN1-215ENST00000528396 RTL1A6NKG5 1358 aa18.33■□□□□ 0.53
CAPN1-215ENST00000528396 HOXC9P31274 260 aa18.33■□□□□ 0.52
CAPN1-215ENST00000528396 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-215ENST00000528396 TNNT2P45379 298 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-215ENST00000528396 DDB1Q16531 1140 aa18.32■□□□□ 0.52
CAPN1-215ENST00000528396 SMG6Q86US8 1419 aaKnown RBP18.32■□□□□ 0.52
CAPN1-215ENST00000528396 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
CAPN1-215ENST00000528396 NSD2O96028 1365 aa18.3■□□□□ 0.52
CAPN1-215ENST00000528396 FAM196AQ6ZSG2 479 aa18.3■□□□□ 0.52
CAPN1-215ENST00000528396 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
CAPN1-215ENST00000528396 FLT4P35916 1363 aa18.3■□□□□ 0.52
CAPN1-215ENST00000528396 EP400Q96L91 3159 aa18.29■□□□□ 0.52
CAPN1-215ENST00000528396 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
CAPN1-215ENST00000528396 KIF24Q5T7B8 1368 aa18.28■□□□□ 0.52
CAPN1-215ENST00000528396 PARP4Q9UKK3 1724 aaKnown RBP18.27■□□□□ 0.52
CAPN1-215ENST00000528396 EXOC5O00471 708 aa18.27■□□□□ 0.52
CAPN1-215ENST00000528396 IL2RBP14784 551 aa18.27■□□□□ 0.52
CAPN1-215ENST00000528396 EMILIN1Q9Y6C2 1016 aa18.27■□□□□ 0.52
CAPN1-215ENST00000528396 FAM208AQ9UK61 1670 aaKnown RBP18.25■□□□□ 0.51
CAPN1-215ENST00000528396 HSP90AB2PQ58FF8 381 aa18.25■□□□□ 0.51
CAPN1-215ENST00000528396 ANKRD26Q9UPS8 1709 aa18.25■□□□□ 0.51
CAPN1-215ENST00000528396 INSRP06213 1382 aa18.25■□□□□ 0.51
CAPN1-215ENST00000528396 OVOS2A0A0G2JMS6 1433 aa18.23■□□□□ 0.51
CAPN1-215ENST00000528396 LRRC37A3O60309 1634 aa18.23■□□□□ 0.51
CAPN1-215ENST00000528396 WNK3Q9BYP7 1800 aa18.23■□□□□ 0.51
CAPN1-215ENST00000528396 ZEB1P37275 1124 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-215ENST00000528396 BAG6P46379 1132 aa18.23■□□□□ 0.51
CAPN1-215ENST00000528396 DISP2A7MBM2 1401 aa18.23■□□□□ 0.51
CAPN1-215ENST00000528396 TRIM37O94972 964 aa18.22■□□□□ 0.51
CAPN1-215ENST00000528396 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
CAPN1-215ENST00000528396 POLKQ9UBT6 870 aa18.22■□□□□ 0.51
CAPN1-215ENST00000528396 TNS2Q63HR2 1409 aa18.21■□□□□ 0.51
CAPN1-215ENST00000528396 PEAK1Q9H792 1746 aa18.2■□□□□ 0.5
CAPN1-215ENST00000528396 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
CAPN1-215ENST00000528396 CC2D1BQ5T0F9 858 aaKnown RBP18.2■□□□□ 0.5
CAPN1-215ENST00000528396 DEFB132Q7Z7B7 95 aa18.2■□□□□ 0.5
CAPN1-215ENST00000528396 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
CAPN1-215ENST00000528396 RAPGEF4Q8WZA2 1011 aa18.2■□□□□ 0.5
CAPN1-215ENST00000528396 MAP2P11137 1827 aaKnown RBP18.2■□□□□ 0.5
CAPN1-215ENST00000528396 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
CAPN1-215ENST00000528396 NBPF6Q5VWK0 638 aa18.19■□□□□ 0.5
CAPN1-215ENST00000528396 MARCH10Q8NA82 808 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-215ENST00000528396 NBPF4Q96M43 638 aa18.19■□□□□ 0.5
CAPN1-215ENST00000528396 APBA3O96018 575 aa18.18■□□□□ 0.5
CAPN1-215ENST00000528396 PER1O15534 1290 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-215ENST00000528396 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-215ENST00000528396 DDX54Q8TDD1 881 aaKnown RBP18.17■□□□□ 0.5
CAPN1-215ENST00000528396 RGPD2P0DJD1 1756 aa18.15■□□□□ 0.5
CAPN1-215ENST00000528396 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-215ENST00000528396 ZCRB1Q8TBF4 217 aaKnown RBP18.15■□□□□ 0.5
CAPN1-215ENST00000528396 EIF4A2Q14240 407 aaKnown RBP18.13■□□□□ 0.49
CAPN1-215ENST00000528396 BCL11BQ9C0K0 894 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-215ENST00000528396 NPC1L1Q9UHC9 1359 aa18.12■□□□□ 0.49
CAPN1-215ENST00000528396 MEGF6O75095 1541 aa18.12■□□□□ 0.49
CAPN1-215ENST00000528396 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
CAPN1-215ENST00000528396 EYA1Q99502 592 aa18.11■□□□□ 0.49
CAPN1-215ENST00000528396 BCL9O00512 1426 aa18.1■□□□□ 0.49
CAPN1-215ENST00000528396 ACSBG1Q96GR2 724 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms