RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
CHD7-207ENST00000527921 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.34
CHD7-207ENST00000527921 SBF2Q86WG5 1849 aa17.2■□□□□ 0.34
CHD7-207ENST00000527921 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
CHD7-207ENST00000527921 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
CHD7-207ENST00000527921 KTN1Q86UP2 1357 aaKnown RBP17.19■□□□□ 0.34
CHD7-207ENST00000527921 KCNH5Q8NCM2 988 aa17.19■□□□□ 0.34
CHD7-207ENST00000527921 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
CHD7-207ENST00000527921 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
CHD7-207ENST00000527921 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
CHD7-207ENST00000527921 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
CHD7-207ENST00000527921 RGPD3A6NKT7 1758 aaPredicted RBP17.17■□□□□ 0.34
CHD7-207ENST00000527921 RGPD4Q7Z3J3 1758 aa17.17■□□□□ 0.34
CHD7-207ENST00000527921 USP31Q70CQ4 1352 aa17.17■□□□□ 0.34
CHD7-207ENST00000527921 ABCC6O95255 1503 aa17.17■□□□□ 0.34
CHD7-207ENST00000527921 BCL9O00512 1426 aa17.16■□□□□ 0.34
CHD7-207ENST00000527921 C11orf95C9JLR9 678 aaPredicted RBP17.16■□□□□ 0.34
CHD7-207ENST00000527921 PTF1AQ7RTS3 328 aa17.16■□□□□ 0.34
CHD7-207ENST00000527921 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
CHD7-207ENST00000527921 DDB1Q16531 1140 aa17.15■□□□□ 0.34
CHD7-207ENST00000527921 MARCH10Q8NA82 808 aaPredicted RBP17.15■□□□□ 0.34
CHD7-207ENST00000527921 CARD10Q9BWT7 1032 aa17.15■□□□□ 0.34
CHD7-207ENST00000527921 SOX12O15370 315 aa17.14■□□□□ 0.33
CHD7-207ENST00000527921 PLSCR1O15162 318 aa17.13■□□□□ 0.33
CHD7-207ENST00000527921 NME9Q86XW9 330 aa17.12■□□□□ 0.33
CHD7-207ENST00000527921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHD7-207ENST00000527921 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
CHD7-207ENST00000527921 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
CHD7-207ENST00000527921 PUS7Q96PZ0 661 aaKnown RBP17.11■□□□□ 0.33
CHD7-207ENST00000527921 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
CHD7-207ENST00000527921 LTN1O94822 1766 aa17.1■□□□□ 0.33
CHD7-207ENST00000527921 NBPF14Q5TI25 921 aa17.1■□□□□ 0.33
CHD7-207ENST00000527921 PROM2Q8N271 834 aa17.1■□□□□ 0.33
CHD7-207ENST00000527921 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
CHD7-207ENST00000527921 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
CHD7-207ENST00000527921 TESK2Q96S53 571 aa17.09■□□□□ 0.33
CHD7-207ENST00000527921 ERBB3P21860 1342 aa17.09■□□□□ 0.33
CHD7-207ENST00000527921 A0A1W2PP64 1363 aa17.09■□□□□ 0.33
CHD7-207ENST00000527921 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
CHD7-207ENST00000527921 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.32
CHD7-207ENST00000527921 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
CHD7-207ENST00000527921 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.32
CHD7-207ENST00000527921 TNS2Q63HR2 1409 aa17.07■□□□□ 0.32
CHD7-207ENST00000527921 CASZ1Q86V15 1759 aa17.07■□□□□ 0.32
CHD7-207ENST00000527921 EXOC5O00471 708 aa17.06■□□□□ 0.32
CHD7-207ENST00000527921 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
CHD7-207ENST00000527921 ST20-MTHFSA0A0A6YYL1 179 aa17.04■□□□□ 0.32
CHD7-207ENST00000527921 TERF2IPQ9NYB0 399 aa17.04■□□□□ 0.32
CHD7-207ENST00000527921 NHSQ6T4R5 1651 aa17.04■□□□□ 0.32
CHD7-207ENST00000527921 KCNQ2O43526 872 aa17.03■□□□□ 0.32
CHD7-207ENST00000527921 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.32
CHD7-207ENST00000527921 ANKRD24Q8TF21 1146 aa17.02■□□□□ 0.32
CHD7-207ENST00000527921 PDGFDQ9GZP0 370 aaPredicted RBP17.02■□□□□ 0.32
CHD7-207ENST00000527921 NLRP2Q9NX02 1062 aa17.02■□□□□ 0.32
CHD7-207ENST00000527921 SPON1Q9HCB6 807 aa17.01■□□□□ 0.31
CHD7-207ENST00000527921 IL2RBP14784 551 aa17■□□□□ 0.31
CHD7-207ENST00000527921 TXNRD1Q16881 649 aa17■□□□□ 0.31
CHD7-207ENST00000527921 IP6K1Q92551 441 aa17■□□□□ 0.31
CHD7-207ENST00000527921 PAPPAQ13219 1627 aa16.98■□□□□ 0.31
CHD7-207ENST00000527921 UTRNP46939 3433 aa16.98■□□□□ 0.31
CHD7-207ENST00000527921 FAM208AQ9UK61 1670 aaKnown RBP16.97■□□□□ 0.31
CHD7-207ENST00000527921 ACSBG1Q96GR2 724 aa16.97■□□□□ 0.31
CHD7-207ENST00000527921 ANKRD36BQ8N2N9 1353 aa16.97■□□□□ 0.31
CHD7-207ENST00000527921 BTAF1O14981 1849 aa16.96■□□□□ 0.31
CHD7-207ENST00000527921 FBLN1P23142 703 aa16.96■□□□□ 0.31
CHD7-207ENST00000527921 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.3
CHD7-207ENST00000527921 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
CHD7-207ENST00000527921 PTGER2P43116 358 aa16.95■□□□□ 0.3
CHD7-207ENST00000527921 SLC15A2Q16348 729 aa16.95■□□□□ 0.3
CHD7-207ENST00000527921 HOXC9P31274 260 aa16.94■□□□□ 0.3
CHD7-207ENST00000527921 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
CHD7-207ENST00000527921 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
CHD7-207ENST00000527921 USP47Q96K76 1375 aa16.93■□□□□ 0.3
CHD7-207ENST00000527921 RGPD2P0DJD1 1756 aa16.93■□□□□ 0.3
CHD7-207ENST00000527921 ZBTB7AO95365 584 aa16.93■□□□□ 0.3
CHD7-207ENST00000527921 COG3Q96JB2 828 aa16.93■□□□□ 0.3
CHD7-207ENST00000527921 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
CHD7-207ENST00000527921 MYOM1P52179 1685 aa16.93■□□□□ 0.3
CHD7-207ENST00000527921 FYB1O15117 783 aa16.92■□□□□ 0.3
CHD7-207ENST00000527921 SGIP1Q9BQI5 828 aa16.92■□□□□ 0.3
CHD7-207ENST00000527921 STK32BQ9NY57 414 aa16.92■□□□□ 0.3
CHD7-207ENST00000527921 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
CHD7-207ENST00000527921 LRRC4BQ9NT99 713 aa16.91■□□□□ 0.3
CHD7-207ENST00000527921 MEGF6O75095 1541 aa16.9■□□□□ 0.3
CHD7-207ENST00000527921 RTL1A6NKG5 1358 aa16.89■□□□□ 0.3
CHD7-207ENST00000527921 TMF1P82094 1093 aa16.89■□□□□ 0.29
CHD7-207ENST00000527921 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
CHD7-207ENST00000527921 NSD2O96028 1365 aa16.89■□□□□ 0.29
CHD7-207ENST00000527921 AMPHP49418 695 aa16.88■□□□□ 0.29
CHD7-207ENST00000527921 RRS1Q15050 365 aaKnown RBP16.88■□□□□ 0.29
CHD7-207ENST00000527921 ZNF827Q17R98 1081 aa16.88■□□□□ 0.29
CHD7-207ENST00000527921 DDX54Q8TDD1 881 aaKnown RBP16.88■□□□□ 0.29
CHD7-207ENST00000527921 GGNBP2Q9H3C7 697 aa16.88■□□□□ 0.29
CHD7-207ENST00000527921 DOT1LQ8TEK3 1739 aa16.87■□□□□ 0.29
CHD7-207ENST00000527921 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
CHD7-207ENST00000527921 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
CHD7-207ENST00000527921 MTFR1LQ9H019 292 aa16.87■□□□□ 0.29
CHD7-207ENST00000527921 KAT6BQ8WYB5 2073 aa16.86■□□□□ 0.29
CHD7-207ENST00000527921 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
CHD7-207ENST00000527921 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms