RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 NUP188Q5SRE5 1749 aa24.93■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 R3HDM1Q15032 1099 aaKnown RBP24.93■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 TOM1L2Q6ZVM7 507 aa24.92■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 RGPD3A6NKT7 1758 aaPredicted RBP24.92■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 RGPD4Q7Z3J3 1758 aa24.92■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 WDR17Q8IZU2 1322 aa24.91■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 CDCA7Q9BWT1 371 aaPredicted RBP24.91■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 PEAK1Q9H792 1746 aa24.91■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 USP54Q70EL1 1684 aa24.9■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 ARHGEF25Q86VW2 580 aa24.89■■□□□ 1.58
CKLF-CMTM1-202ENST00000527845 NFAT5O94916 1531 aa24.88■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 DDB1Q16531 1140 aa24.88■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 SBF2Q86WG5 1849 aa24.87■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 NBPF14Q5TI25 921 aa24.87■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 CARD11Q9BXL7 1154 aa24.87■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 RGPD5Q99666 1765 aa24.87■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 TONSLQ96HA7 1378 aa24.86■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 AXIN2Q9Y2T1 843 aa24.84■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 BCL9O00512 1426 aa24.84■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 USP31Q70CQ4 1352 aa24.83■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 CCDC7Q96M83 1385 aa24.83■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 CARD10Q9BWT7 1032 aa24.83■■□□□ 1.57
CKLF-CMTM1-202ENST00000527845 CSB-PGBD3P0DP91 1061 aa24.82■■□□□ 1.56
CKLF-CMTM1-202ENST00000527845 PLSCR1O15162 318 aa24.8■■□□□ 1.56
CKLF-CMTM1-202ENST00000527845 HDGFL2Q7Z4V5 671 aaPredicted RBP24.8■■□□□ 1.56
CKLF-CMTM1-202ENST00000527845 CD163L1Q9NR16 1453 aa24.79■■□□□ 1.56
CKLF-CMTM1-202ENST00000527845 SOX12O15370 315 aa24.79■■□□□ 1.56
CKLF-CMTM1-202ENST00000527845 PUS7Q96PZ0 661 aaKnown RBP24.79■■□□□ 1.56
CKLF-CMTM1-202ENST00000527845 EDC4Q6P2E9 1401 aaKnown RBP24.78■■□□□ 1.56
CKLF-CMTM1-202ENST00000527845 LTN1O94822 1766 aa24.78■■□□□ 1.56
CKLF-CMTM1-202ENST00000527845 BCL11BQ9C0K0 894 aaPredicted RBP24.78■■□□□ 1.56
CKLF-CMTM1-202ENST00000527845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.76■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 TERF2IPQ9NYB0 399 aa24.76■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 SLC24A1O60721 1099 aa24.75■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 TMC1Q8TDI8 760 aa24.75■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 NINLQ9Y2I6 1382 aa24.75■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 TNS2Q63HR2 1409 aa24.75■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 EXOC5O00471 708 aa24.74■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 MARCH10Q8NA82 808 aaPredicted RBP24.74■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 ERBB3P21860 1342 aa24.72■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 NME9Q86XW9 330 aa24.71■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 A0A1W2PP64 1363 aa24.7■■□□□ 1.55
CKLF-CMTM1-202ENST00000527845 FAM208AQ9UK61 1670 aaKnown RBP24.7■■□□□ 1.54
CKLF-CMTM1-202ENST00000527845 SLC12A5Q9H2X9 1139 aa24.69■■□□□ 1.54
CKLF-CMTM1-202ENST00000527845 SPON1Q9HCB6 807 aa24.69■■□□□ 1.54
CKLF-CMTM1-202ENST00000527845 NHSQ6T4R5 1651 aa24.69■■□□□ 1.54
CKLF-CMTM1-202ENST00000527845 KCNQ2O43526 872 aa24.66■■□□□ 1.54
CKLF-CMTM1-202ENST00000527845 NLRP2Q9NX02 1062 aa24.66■■□□□ 1.54
CKLF-CMTM1-202ENST00000527845 CASZ1Q86V15 1759 aa24.65■■□□□ 1.54
CKLF-CMTM1-202ENST00000527845 IL2RBP14784 551 aa24.64■■□□□ 1.54
CKLF-CMTM1-202ENST00000527845 PPP1R1BQ9UD71 204 aaPredicted RBP24.64■■□□□ 1.54
CKLF-CMTM1-202ENST00000527845 ANKRD24Q8TF21 1146 aa24.63■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 TESK2Q96S53 571 aa24.62■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 PTF1AQ7RTS3 328 aa24.61■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 ST20-MTHFSA0A0A6YYL1 179 aa24.6■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 TXNRD1Q16881 649 aa24.6■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 ANO8Q9HCE9 1232 aaPredicted RBP24.6■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 COG3Q96JB2 828 aa24.59■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 STK32BQ9NY57 414 aa24.59■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 ANKRD36BQ8N2N9 1353 aa24.58■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 PROM2Q8N271 834 aa24.58■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 IP6K1Q92551 441 aa24.58■■□□□ 1.53
CKLF-CMTM1-202ENST00000527845 DCAF8L1A6NGE4 600 aa24.56■■□□□ 1.52
CKLF-CMTM1-202ENST00000527845 BTAF1O14981 1849 aa24.56■■□□□ 1.52
CKLF-CMTM1-202ENST00000527845 TRIM26Q12899 539 aaPredicted RBP24.55■■□□□ 1.52
CKLF-CMTM1-202ENST00000527845 SLC15A2Q16348 729 aa24.54■■□□□ 1.52
CKLF-CMTM1-202ENST00000527845 RTL1A6NKG5 1358 aa24.54■■□□□ 1.52
CKLF-CMTM1-202ENST00000527845 TMF1P82094 1093 aa24.53■■□□□ 1.52
CKLF-CMTM1-202ENST00000527845 ACSBG1Q96GR2 724 aa24.52■■□□□ 1.52
CKLF-CMTM1-202ENST00000527845 PAPPAQ13219 1627 aa24.52■■□□□ 1.52
CKLF-CMTM1-202ENST00000527845 USP47Q96K76 1375 aa24.52■■□□□ 1.52
CKLF-CMTM1-202ENST00000527845 CDCA8Q53HL2 280 aa24.5■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 MAP3K19Q56UN5 1328 aa24.5■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 HOXC9P31274 260 aa24.49■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 AMPHP49418 695 aa24.49■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 MYOM1P52179 1685 aa24.48■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 KAT6BQ8WYB5 2073 aa24.48■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 KIF20BQ96Q89 1820 aa24.47■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 LTV1Q96GA3 475 aaPredicted RBP24.47■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 SMG6Q86US8 1419 aaKnown RBP24.46■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 ZBTB7AO95365 584 aa24.46■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 MTFR1LQ9H019 292 aa24.46■■□□□ 1.51
CKLF-CMTM1-202ENST00000527845 QSER1Q2KHR3 1735 aa24.44■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 PDGFDQ9GZP0 370 aaPredicted RBP24.44■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 RGPD2P0DJD1 1756 aa24.44■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 DOT1LQ8TEK3 1739 aa24.44■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 CGNL1Q0VF96 1302 aa24.43■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 PTGER2P43116 358 aa24.43■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 SLC27A3Q5K4L6 730 aa24.43■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 DDX54Q8TDD1 881 aaKnown RBP24.43■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 SHANK3Q9BYB0 1731 aa24.43■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 KIF24Q5T7B8 1368 aa24.42■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 YY1P25490 414 aa24.42■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 TIMELESSQ9UNS1 1208 aa24.42■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 FYB1O15117 783 aa24.41■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 ATF5Q9Y2D1 282 aaPredicted RBP24.41■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 ZCRB1Q8TBF4 217 aaKnown RBP24.4■■□□□ 1.5
CKLF-CMTM1-202ENST00000527845 GGNBP2Q9H3C7 697 aa24.39■■□□□ 1.49
CKLF-CMTM1-202ENST00000527845 MEGF6O75095 1541 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms