RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 GGNBP2Q9H3C7 697 aa31.81■■■□□ 2.68
LRRK1-206ENST00000527698 NFAT5O94916 1531 aa31.8■■■□□ 2.68
LRRK1-206ENST00000527698 ARHGEF25Q86VW2 580 aa31.8■■■□□ 2.68
LRRK1-206ENST00000527698 AATKQ6ZMQ8 1374 aa31.8■■■□□ 2.68
LRRK1-206ENST00000527698 DEFB132Q7Z7B7 95 aa31.79■■■□□ 2.68
LRRK1-206ENST00000527698 BTG4Q9NY30 223 aa31.79■■■□□ 2.68
LRRK1-206ENST00000527698 ABCC6O95255 1503 aa31.79■■■□□ 2.68
LRRK1-206ENST00000527698 ANKRD26Q9UPS8 1709 aa31.78■■■□□ 2.68
LRRK1-206ENST00000527698 PER1O15534 1290 aaPredicted RBP31.76■■■□□ 2.67
LRRK1-206ENST00000527698 LTN1O94822 1766 aa31.74■■■□□ 2.67
LRRK1-206ENST00000527698 SOX12O15370 315 aa31.74■■■□□ 2.67
LRRK1-206ENST00000527698 CHRNA2Q15822 529 aa31.73■■■□□ 2.67
LRRK1-206ENST00000527698 LMO7Q8WWI1 1683 aa31.73■■■□□ 2.67
LRRK1-206ENST00000527698 NPC1L1Q9UHC9 1359 aa31.72■■■□□ 2.67
LRRK1-206ENST00000527698 FAM98CQ17RN3 349 aaKnown RBP31.72■■■□□ 2.67
LRRK1-206ENST00000527698 A0A0G2JS52 829 aa31.71■■■□□ 2.67
LRRK1-206ENST00000527698 EVA1CP58658 441 aa31.71■■■□□ 2.67
LRRK1-206ENST00000527698 MYT1Q01538 1121 aa31.71■■■□□ 2.67
LRRK1-206ENST00000527698 THSD7AQ9UPZ6 1657 aa31.7■■■□□ 2.67
LRRK1-206ENST00000527698 RGPD1P0DJD0 1748 aa31.7■■■□□ 2.67
LRRK1-206ENST00000527698 AMER1Q5JTC6 1135 aaPredicted RBP31.7■■■□□ 2.67
LRRK1-206ENST00000527698 COL18A1P39060 1754 aa31.7■■■□□ 2.67
LRRK1-206ENST00000527698 SPATA31A5Q5VU36 1347 aa31.7■■■□□ 2.66
LRRK1-206ENST00000527698 SPATA31A7Q8IWB4 1347 aa31.7■■■□□ 2.66
LRRK1-206ENST00000527698 KIF24Q5T7B8 1368 aa31.69■■■□□ 2.66
LRRK1-206ENST00000527698 ZBTB7CA1YPR0 619 aa31.68■■■□□ 2.66
LRRK1-206ENST00000527698 BAG6P46379 1132 aa31.68■■■□□ 2.66
LRRK1-206ENST00000527698 LRP5O75197 1615 aa31.67■■■□□ 2.66
LRRK1-206ENST00000527698 CAMTA1Q9Y6Y1 1673 aa31.67■■■□□ 2.66
LRRK1-206ENST00000527698 MORC1Q86VD1 984 aa31.66■■■□□ 2.66
LRRK1-206ENST00000527698 IP6K1Q92551 441 aa31.65■■■□□ 2.66
LRRK1-206ENST00000527698 RTL1A6NKG5 1358 aa31.65■■■□□ 2.66
LRRK1-206ENST00000527698 MAP2P11137 1827 aaKnown RBP31.64■■■□□ 2.66
LRRK1-206ENST00000527698 AMPHP49418 695 aa31.64■■■□□ 2.66
LRRK1-206ENST00000527698 ZNF316A6NFI3 1004 aaPredicted RBP31.63■■■□□ 2.65
LRRK1-206ENST00000527698 COL5A2P05997 1499 aaPredicted RBP31.62■■■□□ 2.65
LRRK1-206ENST00000527698 MAP3K19Q56UN5 1328 aa31.62■■■□□ 2.65
LRRK1-206ENST00000527698 RGPD5Q99666 1765 aa31.62■■■□□ 2.65
LRRK1-206ENST00000527698 STRN4Q9NRL3 753 aa31.61■■■□□ 2.65
LRRK1-206ENST00000527698 AXIN2Q9Y2T1 843 aa31.6■■■□□ 2.65
LRRK1-206ENST00000527698 DISP2A7MBM2 1401 aa31.58■■■□□ 2.65
LRRK1-206ENST00000527698 TNS1Q9HBL0 1735 aaKnown RBP31.58■■■□□ 2.65
LRRK1-206ENST00000527698 FLT4P35916 1363 aa31.57■■■□□ 2.64
LRRK1-206ENST00000527698 SPATA31A1Q5TZJ5 1347 aa31.57■■■□□ 2.64
LRRK1-206ENST00000527698 WDR17Q8IZU2 1322 aa31.57■■■□□ 2.64
LRRK1-206ENST00000527698 HOXC9P31274 260 aa31.57■■■□□ 2.64
LRRK1-206ENST00000527698 RRS1Q15050 365 aaKnown RBP31.57■■■□□ 2.64
LRRK1-206ENST00000527698 THRAP3Q9Y2W1 955 aaKnown RBP31.56■■■□□ 2.64
LRRK1-206ENST00000527698 CRB1P82279 1406 aa31.56■■■□□ 2.64
LRRK1-206ENST00000527698 DDX10Q13206 875 aaKnown RBP31.55■■■□□ 2.64
LRRK1-206ENST00000527698 CC2D1BQ5T0F9 858 aaKnown RBP31.55■■■□□ 2.64
LRRK1-206ENST00000527698 CSB-PGBD3P0DP91 1061 aa31.54■■■□□ 2.64
LRRK1-206ENST00000527698 FAM208AQ9UK61 1670 aaKnown RBP31.54■■■□□ 2.64
LRRK1-206ENST00000527698 ERBB3P21860 1342 aa31.53■■■□□ 2.64
LRRK1-206ENST00000527698 FBLN1P23142 703 aa31.53■■■□□ 2.64
LRRK1-206ENST00000527698 LARP1Q6PKG0 1096 aaKnown RBP31.53■■■□□ 2.64
LRRK1-206ENST00000527698 POLKQ9UBT6 870 aa31.53■■■□□ 2.64
LRRK1-206ENST00000527698 TNNT2P45379 298 aaPredicted RBP31.52■■■□□ 2.64
LRRK1-206ENST00000527698 TOM1L2Q6ZVM7 507 aa31.52■■■□□ 2.64
LRRK1-206ENST00000527698 INSRP06213 1382 aa31.52■■■□□ 2.64
LRRK1-206ENST00000527698 SMG6Q86US8 1419 aaKnown RBP31.51■■■□□ 2.64
LRRK1-206ENST00000527698 EN1Q05925 392 aaPredicted RBP31.51■■■□□ 2.63
LRRK1-206ENST00000527698 FAM182BQ5T319 152 aa31.51■■■□□ 2.63
LRRK1-206ENST00000527698 ANKRD24Q8TF21 1146 aa31.5■■■□□ 2.63
LRRK1-206ENST00000527698 BARGINQ6ZT62 677 aa31.49■■■□□ 2.63
LRRK1-206ENST00000527698 TCP11L2Q8N4U5 519 aa31.49■■■□□ 2.63
LRRK1-206ENST00000527698 CARD10Q9BWT7 1032 aa31.49■■■□□ 2.63
LRRK1-206ENST00000527698 EMILIN1Q9Y6C2 1016 aa31.49■■■□□ 2.63
LRRK1-206ENST00000527698 PSDA5PKW4 1024 aaPredicted RBP31.48■■■□□ 2.63
LRRK1-206ENST00000527698 PPM1GO15355 546 aaPredicted RBP31.48■■■□□ 2.63
LRRK1-206ENST00000527698 FAM196AQ6ZSG2 479 aa31.47■■■□□ 2.63
LRRK1-206ENST00000527698 CDCA7Q9BWT1 371 aaPredicted RBP31.46■■■□□ 2.63
LRRK1-206ENST00000527698 PEAK1Q9H792 1746 aa31.46■■■□□ 2.63
LRRK1-206ENST00000527698 HSP90AB2PQ58FF8 381 aa31.44■■■□□ 2.62
LRRK1-206ENST00000527698 NLRP2Q9NX02 1062 aa31.43■■■□□ 2.62
LRRK1-206ENST00000527698 USP35Q9P2H5 1018 aa31.43■■■□□ 2.62
LRRK1-206ENST00000527698 PARD3Q8TEW0 1356 aa31.42■■■□□ 2.62
LRRK1-206ENST00000527698 LTV1Q96GA3 475 aaPredicted RBP31.4■■■□□ 2.62
LRRK1-206ENST00000527698 CAMKK2Q96RR4 588 aa31.39■■■□□ 2.62
LRRK1-206ENST00000527698 TRIM37O94972 964 aa31.38■■■□□ 2.61
LRRK1-206ENST00000527698 RALBP1Q15311 655 aa31.38■■■□□ 2.61
LRRK1-206ENST00000527698 EZH2Q15910 746 aaKnown RBP31.38■■■□□ 2.61
LRRK1-206ENST00000527698 MTHFSP49914 203 aa31.37■■■□□ 2.61
LRRK1-206ENST00000527698 PARP4Q9UKK3 1724 aaKnown RBP31.36■■■□□ 2.61
LRRK1-206ENST00000527698 RREB1Q92766 1687 aa31.36■■■□□ 2.61
LRRK1-206ENST00000527698 PDE3BQ13370 1112 aa31.36■■■□□ 2.61
LRRK1-206ENST00000527698 R3HDM1Q15032 1099 aaKnown RBP31.36■■■□□ 2.61
LRRK1-206ENST00000527698 CNGB1Q14028 1251 aaPredicted RBP31.35■■■□□ 2.61
LRRK1-206ENST00000527698 WNK3Q9BYP7 1800 aa31.33■■■□□ 2.61
LRRK1-206ENST00000527698 APBA3O96018 575 aa31.32■■■□□ 2.6
LRRK1-206ENST00000527698 RGPD2P0DJD1 1756 aa31.31■■■□□ 2.6
LRRK1-206ENST00000527698 CFAP53Q96M91 514 aa31.31■■■□□ 2.6
LRRK1-206ENST00000527698 IL2RBP14784 551 aa31.3■■■□□ 2.6
LRRK1-206ENST00000527698 NBPF6Q5VWK0 638 aa31.3■■■□□ 2.6
LRRK1-206ENST00000527698 NBPF4Q96M43 638 aa31.3■■■□□ 2.6
LRRK1-206ENST00000527698 NUP188Q5SRE5 1749 aa31.29■■■□□ 2.6
LRRK1-206ENST00000527698 PPP2R1AP30153 589 aa31.29■■■□□ 2.6
LRRK1-206ENST00000527698 EIF4A2Q14240 407 aaKnown RBP31.29■■■□□ 2.6
LRRK1-206ENST00000527698 DDB1Q16531 1140 aa31.26■■■□□ 2.59
LRRK1-206ENST00000527698 EXOC5O00471 708 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms