RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 NLRP6P59044 892 aa24.14■■□□□ 1.45
LTBP3-208ENST00000527339 LARP1Q6PKG0 1096 aaKnown RBP24.14■■□□□ 1.45
LTBP3-208ENST00000527339 FAM196AQ6ZSG2 479 aa24.14■■□□□ 1.45
LTBP3-208ENST00000527339 SLIT3O75094 1523 aa24.14■■□□□ 1.45
LTBP3-208ENST00000527339 LMO7Q8WWI1 1683 aa24.12■■□□□ 1.45
LTBP3-208ENST00000527339 APBA3O96018 575 aa24.11■■□□□ 1.45
LTBP3-208ENST00000527339 BARGINQ6ZT62 677 aa24.11■■□□□ 1.45
LTBP3-208ENST00000527339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.1■■□□□ 1.45
LTBP3-208ENST00000527339 GCP02774 474 aa24.09■■□□□ 1.45
LTBP3-208ENST00000527339 CPDO75976 1380 aa24.08■■□□□ 1.45
LTBP3-208ENST00000527339 USP31Q70CQ4 1352 aa24.08■■□□□ 1.45
LTBP3-208ENST00000527339 EVA1CP58658 441 aa24.08■■□□□ 1.45
LTBP3-208ENST00000527339 RREB1Q92766 1687 aa24.07■■□□□ 1.44
LTBP3-208ENST00000527339 NUP188Q5SRE5 1749 aa24.05■■□□□ 1.44
LTBP3-208ENST00000527339 PDE3BQ13370 1112 aa24.05■■□□□ 1.44
LTBP3-208ENST00000527339 NME9Q86XW9 330 aa24.05■■□□□ 1.44
LTBP3-208ENST00000527339 TCP11L2Q8N4U5 519 aa24.05■■□□□ 1.44
LTBP3-208ENST00000527339 POLR3GLQ9BT43 218 aa24.05■■□□□ 1.44
LTBP3-208ENST00000527339 KCNH5Q8NCM2 988 aa24.04■■□□□ 1.44
LTBP3-208ENST00000527339 KIF20BQ96Q89 1820 aa24.03■■□□□ 1.44
LTBP3-208ENST00000527339 PARD3Q8TEW0 1356 aa24.03■■□□□ 1.44
LTBP3-208ENST00000527339 OVOS2A0A0J9YW53 1432 aa24.02■■□□□ 1.44
LTBP3-208ENST00000527339 OVOS2Q6IE36 1432 aa24.02■■□□□ 1.44
LTBP3-208ENST00000527339 COL5A2P05997 1499 aaPredicted RBP24.02■■□□□ 1.44
LTBP3-208ENST00000527339 NFAT5O94916 1531 aa24.02■■□□□ 1.44
LTBP3-208ENST00000527339 C11orf95C9JLR9 678 aaPredicted RBP24.01■■□□□ 1.43
LTBP3-208ENST00000527339 PARP4Q9UKK3 1724 aaKnown RBP23.98■■□□□ 1.43
LTBP3-208ENST00000527339 COL18A1P39060 1754 aa23.98■■□□□ 1.43
LTBP3-208ENST00000527339 PTF1AQ7RTS3 328 aa23.98■■□□□ 1.43
LTBP3-208ENST00000527339 NSD3Q9BZ95 1437 aa23.98■■□□□ 1.43
LTBP3-208ENST00000527339 LTN1O94822 1766 aa23.98■■□□□ 1.43
LTBP3-208ENST00000527339 AATKQ6ZMQ8 1374 aa23.97■■□□□ 1.43
LTBP3-208ENST00000527339 CARD14Q9BXL6 1004 aa23.97■■□□□ 1.43
LTBP3-208ENST00000527339 PEAK1Q9H792 1746 aa23.97■■□□□ 1.43
LTBP3-208ENST00000527339 THRAP3Q9Y2W1 955 aaKnown RBP23.97■■□□□ 1.43
LTBP3-208ENST00000527339 KIF7Q2M1P5 1343 aa23.96■■□□□ 1.43
LTBP3-208ENST00000527339 SOX12O15370 315 aa23.96■■□□□ 1.43
LTBP3-208ENST00000527339 ARHGEF25Q86VW2 580 aa23.96■■□□□ 1.43
LTBP3-208ENST00000527339 COG3Q96JB2 828 aa23.96■■□□□ 1.43
LTBP3-208ENST00000527339 ABCC6O95255 1503 aa23.95■■□□□ 1.43
LTBP3-208ENST00000527339 CRB1P82279 1406 aa23.94■■□□□ 1.42
LTBP3-208ENST00000527339 RGPD5Q99666 1765 aa23.94■■□□□ 1.42
LTBP3-208ENST00000527339 ZBTB7CA1YPR0 619 aa23.94■■□□□ 1.42
LTBP3-208ENST00000527339 FYB1O15117 783 aa23.94■■□□□ 1.42
LTBP3-208ENST00000527339 AXIN2Q9Y2T1 843 aa23.94■■□□□ 1.42
LTBP3-208ENST00000527339 LRRC37A3O60309 1634 aa23.92■■□□□ 1.42
LTBP3-208ENST00000527339 SBF2Q86WG5 1849 aa23.91■■□□□ 1.42
LTBP3-208ENST00000527339 GGNBP2Q9H3C7 697 aa23.91■■□□□ 1.42
LTBP3-208ENST00000527339 UTRNP46939 3433 aa23.9■■□□□ 1.42
LTBP3-208ENST00000527339 CGNL1Q0VF96 1302 aa23.9■■□□□ 1.42
LTBP3-208ENST00000527339 NBPF14Q5TI25 921 aa23.9■■□□□ 1.42
LTBP3-208ENST00000527339 PANK3Q9H999 370 aa23.9■■□□□ 1.42
LTBP3-208ENST00000527339 ANO8Q9HCE9 1232 aaPredicted RBP23.9■■□□□ 1.42
LTBP3-208ENST00000527339 ANKRD26Q9UPS8 1709 aa23.9■■□□□ 1.42
LTBP3-208ENST00000527339 CCDC7Q96M83 1385 aa23.89■■□□□ 1.41
LTBP3-208ENST00000527339 OVOS2A0A0G2JMS6 1433 aa23.88■■□□□ 1.41
LTBP3-208ENST00000527339 PDGFDQ9GZP0 370 aaPredicted RBP23.88■■□□□ 1.41
LTBP3-208ENST00000527339 PROM2Q8N271 834 aa23.87■■□□□ 1.41
LTBP3-208ENST00000527339 MARCH10Q8NA82 808 aaPredicted RBP23.86■■□□□ 1.41
LTBP3-208ENST00000527339 WASHC2AQ641Q2 1341 aa23.85■■□□□ 1.41
LTBP3-208ENST00000527339 KCNQ2O43526 872 aa23.85■■□□□ 1.41
LTBP3-208ENST00000527339 ZEB1P37275 1124 aaPredicted RBP23.85■■□□□ 1.41
LTBP3-208ENST00000527339 DDB1Q16531 1140 aa23.85■■□□□ 1.41
LTBP3-208ENST00000527339 TOM1L2Q6ZVM7 507 aa23.85■■□□□ 1.41
LTBP3-208ENST00000527339 PLSCR1O15162 318 aa23.84■■□□□ 1.41
LTBP3-208ENST00000527339 SPON1Q9HCB6 807 aa23.84■■□□□ 1.41
LTBP3-208ENST00000527339 WDR17Q8IZU2 1322 aa23.84■■□□□ 1.41
LTBP3-208ENST00000527339 WNK3Q9BYP7 1800 aa23.83■■□□□ 1.41
LTBP3-208ENST00000527339 BCL11BQ9C0K0 894 aaPredicted RBP23.82■■□□□ 1.4
LTBP3-208ENST00000527339 RGPD3A6NKT7 1758 aaPredicted RBP23.82■■□□□ 1.4
LTBP3-208ENST00000527339 RGPD4Q7Z3J3 1758 aa23.82■■□□□ 1.4
LTBP3-208ENST00000527339 NSD2O96028 1365 aa23.81■■□□□ 1.4
LTBP3-208ENST00000527339 CASZ1Q86V15 1759 aa23.81■■□□□ 1.4
LTBP3-208ENST00000527339 MAP3K19Q56UN5 1328 aa23.81■■□□□ 1.4
LTBP3-208ENST00000527339 YY1P25490 414 aa23.8■■□□□ 1.4
LTBP3-208ENST00000527339 KNSTRNQ9Y448 316 aa23.8■■□□□ 1.4
LTBP3-208ENST00000527339 MAP2P11137 1827 aaKnown RBP23.8■■□□□ 1.4
LTBP3-208ENST00000527339 RTL1A6NKG5 1358 aa23.79■■□□□ 1.4
LTBP3-208ENST00000527339 IP6K1Q92551 441 aa23.79■■□□□ 1.4
LTBP3-208ENST00000527339 FAM208AQ9UK61 1670 aaKnown RBP23.79■■□□□ 1.4
LTBP3-208ENST00000527339 FBLN1P23142 703 aa23.78■■□□□ 1.4
LTBP3-208ENST00000527339 PPP1R1BQ9UD71 204 aaPredicted RBP23.78■■□□□ 1.4
LTBP3-208ENST00000527339 ERBB3P21860 1342 aa23.78■■□□□ 1.4
LTBP3-208ENST00000527339 BCL9O00512 1426 aa23.77■■□□□ 1.4
LTBP3-208ENST00000527339 CSB-PGBD3P0DP91 1061 aa23.77■■□□□ 1.4
LTBP3-208ENST00000527339 AMPHP49418 695 aa23.77■■□□□ 1.4
LTBP3-208ENST00000527339 RRS1Q15050 365 aaKnown RBP23.76■■□□□ 1.39
LTBP3-208ENST00000527339 CARD10Q9BWT7 1032 aa23.76■■□□□ 1.39
LTBP3-208ENST00000527339 KIF24Q5T7B8 1368 aa23.76■■□□□ 1.39
LTBP3-208ENST00000527339 HOXC9P31274 260 aa23.75■■□□□ 1.39
LTBP3-208ENST00000527339 ZBTB7AO95365 584 aa23.74■■□□□ 1.39
LTBP3-208ENST00000527339 ANKRD24Q8TF21 1146 aa23.74■■□□□ 1.39
LTBP3-208ENST00000527339 PER1O15534 1290 aaPredicted RBP23.73■■□□□ 1.39
LTBP3-208ENST00000527339 PTGER2P43116 358 aa23.73■■□□□ 1.39
LTBP3-208ENST00000527339 AMER1Q5JTC6 1135 aaPredicted RBP23.72■■□□□ 1.39
LTBP3-208ENST00000527339 FLT4P35916 1363 aa23.72■■□□□ 1.39
LTBP3-208ENST00000527339 TXNRD1Q16881 649 aa23.71■■□□□ 1.39
LTBP3-208ENST00000527339 CDCA7Q9BWT1 371 aaPredicted RBP23.71■■□□□ 1.39
LTBP3-208ENST00000527339 NLRP2Q9NX02 1062 aa23.69■■□□□ 1.38
LTBP3-208ENST00000527339 ATF5Q9Y2D1 282 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms