RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 PSMG3-AS1Q96PY0 264 aa6.89□□□□□ -1.31
CLNS1A-208ENST00000527265 MINK1Q8N4C8 1332 aaPredicted RBP6.89□□□□□ -1.31
CLNS1A-208ENST00000527265 SRSF11Q05519 484 aaKnown RBP6.88□□□□□ -1.31
CLNS1A-208ENST00000527265 VASH1Q7L8A9 365 aaPredicted RBP6.88□□□□□ -1.31
CLNS1A-208ENST00000527265 BEND7Q8N7W2 519 aaPredicted RBP6.88□□□□□ -1.31
CLNS1A-208ENST00000527265 DCAF5Q96JK2 942 aa6.88□□□□□ -1.31
CLNS1A-208ENST00000527265 SLC35F4A4IF30 521 aa6.87□□□□□ -1.31
CLNS1A-208ENST00000527265 CCDC116Q8IYX3 515 aa6.87□□□□□ -1.31
CLNS1A-208ENST00000527265 BRPF1P55201 1214 aaPredicted RBP6.86□□□□□ -1.31
CLNS1A-208ENST00000527265 LYPD4Q6UWN0 246 aa6.86□□□□□ -1.31
CLNS1A-208ENST00000527265 LYPD8Q6UX82 237 aa6.86□□□□□ -1.31
CLNS1A-208ENST00000527265 Q8N3U1 123 aa6.86□□□□□ -1.31
CLNS1A-208ENST00000527265 PGPEP1Q9NXJ5 209 aa6.86□□□□□ -1.31
CLNS1A-208ENST00000527265 MAP4K5Q9Y4K4 846 aa6.86□□□□□ -1.31
CLNS1A-208ENST00000527265 CELA2BP08218 269 aaPredicted RBP6.85□□□□□ -1.31
CLNS1A-208ENST00000527265 ARMC2Q8NEN0 867 aa6.85□□□□□ -1.31
CLNS1A-208ENST00000527265 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
CLNS1A-208ENST00000527265 CCDC102AQ96A19 550 aa6.85□□□□□ -1.31
CLNS1A-208ENST00000527265 MOXD2PA6NHM9 499 aa6.84□□□□□ -1.31
CLNS1A-208ENST00000527265 SPINT1O43278 529 aa6.84□□□□□ -1.31
CLNS1A-208ENST00000527265 NDUFV2P19404 249 aa6.84□□□□□ -1.31
CLNS1A-208ENST00000527265 NEDD1Q8NHV4 660 aa6.84□□□□□ -1.31
CLNS1A-208ENST00000527265 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
CLNS1A-208ENST00000527265 PROCP04070 461 aa6.83□□□□□ -1.32
CLNS1A-208ENST00000527265 ZMYND10O75800 440 aa6.82□□□□□ -1.32
CLNS1A-208ENST00000527265 UBTFP17480 764 aaKnown RBP6.82□□□□□ -1.32
CLNS1A-208ENST00000527265 C4orf48Q5BLP8 95 aa6.82□□□□□ -1.32
CLNS1A-208ENST00000527265 NBPF14Q5TI25 921 aa6.82□□□□□ -1.32
CLNS1A-208ENST00000527265 SH3RF1Q7Z6J0 888 aa6.82□□□□□ -1.32
CLNS1A-208ENST00000527265 CNTNAP5Q8WYK1 1306 aa6.81□□□□□ -1.32
CLNS1A-208ENST00000527265 F12P00748 615 aaPredicted RBP6.81□□□□□ -1.32
CLNS1A-208ENST00000527265 SLC24A3Q9HC58 644 aa6.81□□□□□ -1.32
CLNS1A-208ENST00000527265 MAGEB6P1A0A0J9YX57 407 aa6.8□□□□□ -1.32
CLNS1A-208ENST00000527265 Q6ZVU0 165 aa6.8□□□□□ -1.32
CLNS1A-208ENST00000527265 TRMT44Q8IYL2 757 aaKnown RBP6.8□□□□□ -1.32
CLNS1A-208ENST00000527265 C1QTNF2Q9BXJ5 285 aa6.8□□□□□ -1.32
CLNS1A-208ENST00000527265 POLMQ9NP87 494 aaPredicted RBP6.8□□□□□ -1.32
CLNS1A-208ENST00000527265 SSTR3P32745 418 aaPredicted RBP6.79□□□□□ -1.32
CLNS1A-208ENST00000527265 TRIM26Q12899 539 aaPredicted RBP6.79□□□□□ -1.32
CLNS1A-208ENST00000527265 DIXDC1Q155Q3 683 aa6.79□□□□□ -1.32
CLNS1A-208ENST00000527265 PPP1R26Q5T8A7 1209 aaPredicted RBP6.79□□□□□ -1.32
CLNS1A-208ENST00000527265 FOXR1Q6PIV2 292 aa6.79□□□□□ -1.32
CLNS1A-208ENST00000527265 BARGINQ6ZT62 677 aa6.79□□□□□ -1.32
CLNS1A-208ENST00000527265 GJA5P36382 358 aa6.78□□□□□ -1.32
CLNS1A-208ENST00000527265 BAG6P46379 1132 aa6.78□□□□□ -1.32
CLNS1A-208ENST00000527265 CBLBQ13191 982 aa6.78□□□□□ -1.32
CLNS1A-208ENST00000527265 KRTAP9-2Q9BYQ4 174 aa6.78□□□□□ -1.32
CLNS1A-208ENST00000527265 ZBTB3Q9H5J0 574 aa6.78□□□□□ -1.32
CLNS1A-208ENST00000527265 MBIPQ9NS73 344 aa6.78□□□□□ -1.32
CLNS1A-208ENST00000527265 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
CLNS1A-208ENST00000527265 ITGB2P05107 769 aa6.77□□□□□ -1.33
CLNS1A-208ENST00000527265 BCRP11274 1271 aa6.77□□□□□ -1.33
CLNS1A-208ENST00000527265 CTSOP43234 321 aaPredicted RBP6.77□□□□□ -1.33
CLNS1A-208ENST00000527265 DHX9Q08211 1270 aaKnown RBP6.77□□□□□ -1.33
CLNS1A-208ENST00000527265 NPM2Q86SE8 214 aaKnown RBP6.77□□□□□ -1.33
CLNS1A-208ENST00000527265 CFAP99D6REC4 459 aa6.76□□□□□ -1.33
CLNS1A-208ENST00000527265 RELBQ01201 579 aa6.76□□□□□ -1.33
CLNS1A-208ENST00000527265 TSC1Q92574 1164 aa6.76□□□□□ -1.33
CLNS1A-208ENST00000527265 INSM2Q96T92 566 aaPredicted RBP6.76□□□□□ -1.33
CLNS1A-208ENST00000527265 CARD14Q9BXL6 1004 aa6.76□□□□□ -1.33
CLNS1A-208ENST00000527265 TTLL12Q14166 644 aaPredicted RBP6.75□□□□□ -1.33
CLNS1A-208ENST00000527265 GAS6Q14393 721 aa6.75□□□□□ -1.33
CLNS1A-208ENST00000527265 NEUROD2Q15784 382 aa6.75□□□□□ -1.33
CLNS1A-208ENST00000527265 ALYREFQ86V81 257 aaKnown RBP6.75□□□□□ -1.33
CLNS1A-208ENST00000527265 GMCL1Q96IK5 515 aa6.75□□□□□ -1.33
CLNS1A-208ENST00000527265 CDV3Q9UKY7 258 aaKnown RBP6.75□□□□□ -1.33
CLNS1A-208ENST00000527265 IGF1RP08069 1367 aa6.74□□□□□ -1.33
CLNS1A-208ENST00000527265 RNF217Q8TC41 542 aa6.74□□□□□ -1.33
CLNS1A-208ENST00000527265 NSFL1CQ9UNZ2 370 aaKnown RBP6.74□□□□□ -1.33
CLNS1A-208ENST00000527265 SENP3-EIF4A1A0A087X0R7 540 aa6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 KRTAP9-6A0A140TA67 174 aa6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 FURINP09958 794 aa6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 HRCP23327 699 aa6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 RSBN1LQ6PCB5 846 aaPredicted RBP6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 SH3BP5LQ7L8J4 393 aa6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 SLC10A4Q96EP9 437 aa6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 AK7Q96M32 723 aa6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 AGBL1Q96MI9 1066 aa6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 LRRC4BQ9NT99 713 aa6.73□□□□□ -1.33
CLNS1A-208ENST00000527265 PRPF38BQ5VTL8 546 aaKnown RBP6.72□□□□□ -1.33
CLNS1A-208ENST00000527265 GPKOWQ92917 476 aaPredicted RBP eCLIP6.72□□□□□ -1.33
CLNS1A-208ENST00000527265 LYSMD3Q7Z3D4 306 aa6.71□□□□□ -1.34
CLNS1A-208ENST00000527265 KRTAP1-3Q8IUG1 177 aa6.71□□□□□ -1.34
CLNS1A-208ENST00000527265 TRERF1Q96PN7 1200 aa6.71□□□□□ -1.34
CLNS1A-208ENST00000527265 KCTD15Q96SI1 283 aaPredicted RBP6.71□□□□□ -1.34
CLNS1A-208ENST00000527265 BEGAINQ9BUH8 593 aa6.71□□□□□ -1.34
CLNS1A-208ENST00000527265 MKL2Q9ULH7 1088 aa6.71□□□□□ -1.34
CLNS1A-208ENST00000527265 PER1O15534 1290 aaPredicted RBP6.7□□□□□ -1.34
CLNS1A-208ENST00000527265 ERFEQ4G0M1 354 aa6.7□□□□□ -1.34
CLNS1A-208ENST00000527265 TBC1D2Q9BYX2 928 aa6.7□□□□□ -1.34
CLNS1A-208ENST00000527265 ZNF395Q9H8N7 513 aaPredicted RBP6.7□□□□□ -1.34
CLNS1A-208ENST00000527265 TRIM22Q8IYM9 498 aa6.69□□□□□ -1.34
CLNS1A-208ENST00000527265 HELBQ8NG08 1087 aaPredicted RBP6.69□□□□□ -1.34
CLNS1A-208ENST00000527265 ZNF837Q96EG3 531 aaPredicted RBP6.69□□□□□ -1.34
CLNS1A-208ENST00000527265 PCDHB15Q9Y5E8 787 aa6.69□□□□□ -1.34
CLNS1A-208ENST00000527265 NUTM2BA6NNL0 878 aaPredicted RBP6.68□□□□□ -1.34
CLNS1A-208ENST00000527265 NUTM2EB1AL46 878 aaPredicted RBP6.68□□□□□ -1.34
CLNS1A-208ENST00000527265 H7C1W4 665 aa6.68□□□□□ -1.34
CLNS1A-208ENST00000527265 GPR25O00155 361 aa6.68□□□□□ -1.34
CLNS1A-208ENST00000527265 TRIM66O15016 1216 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms