RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 ONECUT3O60422 494 aaPredicted RBP25.37■■□□□ 1.65
TRIM3-205ENST00000527237 HSPA5P11021 654 aaKnown RBP25.37■■□□□ 1.65
TRIM3-205ENST00000527237 MYT1Q01538 1121 aa25.37■■□□□ 1.65
TRIM3-205ENST00000527237 LARP1Q6PKG0 1096 aaKnown RBP25.37■■□□□ 1.65
TRIM3-205ENST00000527237 ANKRD26Q9UPS8 1709 aa25.36■■□□□ 1.65
TRIM3-205ENST00000527237 TNS1Q9HBL0 1735 aaKnown RBP25.35■■□□□ 1.65
TRIM3-205ENST00000527237 ARHGEF25Q86VW2 580 aa25.35■■□□□ 1.65
TRIM3-205ENST00000527237 KCNH5Q8NCM2 988 aa25.34■■□□□ 1.65
TRIM3-205ENST00000527237 USP35Q9P2H5 1018 aa25.34■■□□□ 1.65
TRIM3-205ENST00000527237 RGPD1P0DJD0 1748 aa25.34■■□□□ 1.65
TRIM3-205ENST00000527237 EVA1CP58658 441 aa25.33■■□□□ 1.65
TRIM3-205ENST00000527237 EIF4G2P78344 907 aaKnown RBP eCLIP25.33■■□□□ 1.65
TRIM3-205ENST00000527237 CRB1P82279 1406 aa25.33■■□□□ 1.65
TRIM3-205ENST00000527237 AXIN2Q9Y2T1 843 aa25.33■■□□□ 1.65
TRIM3-205ENST00000527237 FAM208AQ9UK61 1670 aaKnown RBP25.32■■□□□ 1.64
TRIM3-205ENST00000527237 CDCA8Q53HL2 280 aa25.31■■□□□ 1.64
TRIM3-205ENST00000527237 KRT27Q7Z3Y8 459 aa25.29■■□□□ 1.64
TRIM3-205ENST00000527237 PEAK1Q9H792 1746 aa25.29■■□□□ 1.64
TRIM3-205ENST00000527237 NSD3Q9BZ95 1437 aa25.29■■□□□ 1.64
TRIM3-205ENST00000527237 SBF2Q86WG5 1849 aa25.28■■□□□ 1.64
TRIM3-205ENST00000527237 FAM182BQ5T319 152 aa25.27■■□□□ 1.64
TRIM3-205ENST00000527237 POLR3GLQ9BT43 218 aa25.27■■□□□ 1.64
TRIM3-205ENST00000527237 MAP2P11137 1827 aaKnown RBP25.26■■□□□ 1.63
TRIM3-205ENST00000527237 TCP11L2Q8N4U5 519 aa25.25■■□□□ 1.63
TRIM3-205ENST00000527237 WDR17Q8IZU2 1322 aa25.25■■□□□ 1.63
TRIM3-205ENST00000527237 BARGINQ6ZT62 677 aa25.24■■□□□ 1.63
TRIM3-205ENST00000527237 CARD14Q9BXL6 1004 aa25.24■■□□□ 1.63
TRIM3-205ENST00000527237 FBLN1P23142 703 aa25.23■■□□□ 1.63
TRIM3-205ENST00000527237 GGNBP2Q9H3C7 697 aa25.23■■□□□ 1.63
TRIM3-205ENST00000527237 BLMP54132 1417 aaPredicted RBP25.22■■□□□ 1.63
TRIM3-205ENST00000527237 FYB1O15117 783 aa25.22■■□□□ 1.63
TRIM3-205ENST00000527237 TOM1L2Q6ZVM7 507 aa25.22■■□□□ 1.63
TRIM3-205ENST00000527237 COG3Q96JB2 828 aa25.22■■□□□ 1.63
TRIM3-205ENST00000527237 C11orf95C9JLR9 678 aaPredicted RBP25.21■■□□□ 1.63
TRIM3-205ENST00000527237 DISP2A7MBM2 1401 aa25.19■■□□□ 1.62
TRIM3-205ENST00000527237 ERBB3P21860 1342 aa25.18■■□□□ 1.62
TRIM3-205ENST00000527237 CSB-PGBD3P0DP91 1061 aa25.18■■□□□ 1.62
TRIM3-205ENST00000527237 THRAP3Q9Y2W1 955 aaKnown RBP25.18■■□□□ 1.62
TRIM3-205ENST00000527237 MAP3K19Q56UN5 1328 aa25.17■■□□□ 1.62
TRIM3-205ENST00000527237 SHANK3Q9BYB0 1731 aa25.17■■□□□ 1.62
TRIM3-205ENST00000527237 RRS1Q15050 365 aaKnown RBP25.13■■□□□ 1.61
TRIM3-205ENST00000527237 ANKRD24Q8TF21 1146 aa25.13■■□□□ 1.61
TRIM3-205ENST00000527237 CARD10Q9BWT7 1032 aa25.13■■□□□ 1.61
TRIM3-205ENST00000527237 DEFB132Q7Z7B7 95 aa25.12■■□□□ 1.61
TRIM3-205ENST00000527237 CCDC7Q96M83 1385 aa25.12■■□□□ 1.61
TRIM3-205ENST00000527237 RREB1Q92766 1687 aa25.12■■□□□ 1.61
TRIM3-205ENST00000527237 RTL1A6NKG5 1358 aa25.11■■□□□ 1.61
TRIM3-205ENST00000527237 CCDC125Q86Z20 511 aa25.11■■□□□ 1.61
TRIM3-205ENST00000527237 IP6K1Q92551 441 aa25.11■■□□□ 1.61
TRIM3-205ENST00000527237 HOXC9P31274 260 aa25.1■■□□□ 1.61
TRIM3-205ENST00000527237 PDE3BQ13370 1112 aa25.1■■□□□ 1.61
TRIM3-205ENST00000527237 TNS2Q63HR2 1409 aa25.1■■□□□ 1.61
TRIM3-205ENST00000527237 KIF7Q2M1P5 1343 aa25.1■■□□□ 1.61
TRIM3-205ENST00000527237 LTV1Q96GA3 475 aaPredicted RBP25.09■■□□□ 1.61
TRIM3-205ENST00000527237 PANK3Q9H999 370 aa25.08■■□□□ 1.61
TRIM3-205ENST00000527237 NLRP2Q9NX02 1062 aa25.08■■□□□ 1.61
TRIM3-205ENST00000527237 NUP188Q5SRE5 1749 aa25.08■■□□□ 1.61
TRIM3-205ENST00000527237 OVOS2A0A0G2JMS6 1433 aa25.07■■□□□ 1.6
TRIM3-205ENST00000527237 AMPHP49418 695 aa25.07■■□□□ 1.6
TRIM3-205ENST00000527237 CGNL1Q0VF96 1302 aa25.07■■□□□ 1.6
TRIM3-205ENST00000527237 DDB1Q16531 1140 aa25.06■■□□□ 1.6
TRIM3-205ENST00000527237 NHSQ6T4R5 1651 aa25.06■■□□□ 1.6
TRIM3-205ENST00000527237 KAT6BQ8WYB5 2073 aa25.05■■□□□ 1.6
TRIM3-205ENST00000527237 SF3B2Q13435 895 aaKnown RBP25.05■■□□□ 1.6
TRIM3-205ENST00000527237 RGPD3A6NKT7 1758 aaPredicted RBP25.05■■□□□ 1.6
TRIM3-205ENST00000527237 RGPD4Q7Z3J3 1758 aa25.05■■□□□ 1.6
TRIM3-205ENST00000527237 TRIM37O94972 964 aa25.04■■□□□ 1.6
TRIM3-205ENST00000527237 FAM196AQ6ZSG2 479 aa25.04■■□□□ 1.6
TRIM3-205ENST00000527237 EMILIN1Q9Y6C2 1016 aa25.03■■□□□ 1.6
TRIM3-205ENST00000527237 DOT1LQ8TEK3 1739 aa25.03■■□□□ 1.6
TRIM3-205ENST00000527237 FLT4P35916 1363 aa25.02■■□□□ 1.6
TRIM3-205ENST00000527237 BTAF1O14981 1849 aa25.01■■□□□ 1.59
TRIM3-205ENST00000527237 MARCH10Q8NA82 808 aaPredicted RBP25.01■■□□□ 1.59
TRIM3-205ENST00000527237 CDCA7Q9BWT1 371 aaPredicted RBP25.01■■□□□ 1.59
TRIM3-205ENST00000527237 MEGF6O75095 1541 aa25.01■■□□□ 1.59
TRIM3-205ENST00000527237 INSRP06213 1382 aa24.99■■□□□ 1.59
TRIM3-205ENST00000527237 HSP90AB2PQ58FF8 381 aa24.99■■□□□ 1.59
TRIM3-205ENST00000527237 PKD1L3Q7Z443 1732 aa24.98■■□□□ 1.59
TRIM3-205ENST00000527237 SMG6Q86US8 1419 aaKnown RBP24.98■■□□□ 1.59
TRIM3-205ENST00000527237 IL2RBP14784 551 aa24.98■■□□□ 1.59
TRIM3-205ENST00000527237 BAG6P46379 1132 aa24.98■■□□□ 1.59
TRIM3-205ENST00000527237 EN1Q05925 392 aaPredicted RBP24.98■■□□□ 1.59
TRIM3-205ENST00000527237 KIF24Q5T7B8 1368 aa24.97■■□□□ 1.59
TRIM3-205ENST00000527237 NSD2O96028 1365 aa24.96■■□□□ 1.59
TRIM3-205ENST00000527237 TNNT2P45379 298 aaPredicted RBP24.96■■□□□ 1.59
TRIM3-205ENST00000527237 USHBP1Q8N6Y0 703 aa24.96■■□□□ 1.59
TRIM3-205ENST00000527237 WASHC2AQ641Q2 1341 aa24.95■■□□□ 1.58
TRIM3-205ENST00000527237 PTF1AQ7RTS3 328 aa24.95■■□□□ 1.58
TRIM3-205ENST00000527237 EXOC5O00471 708 aa24.94■■□□□ 1.58
TRIM3-205ENST00000527237 NBPF6Q5VWK0 638 aa24.94■■□□□ 1.58
TRIM3-205ENST00000527237 NBPF4Q96M43 638 aa24.94■■□□□ 1.58
TRIM3-205ENST00000527237 BCL9O00512 1426 aa24.94■■□□□ 1.58
TRIM3-205ENST00000527237 PPM1GO15355 546 aaPredicted RBP24.93■■□□□ 1.58
TRIM3-205ENST00000527237 APBA3O96018 575 aa24.92■■□□□ 1.58
TRIM3-205ENST00000527237 EZH2Q15910 746 aaKnown RBP24.92■■□□□ 1.58
TRIM3-205ENST00000527237 POLKQ9UBT6 870 aa24.92■■□□□ 1.58
TRIM3-205ENST00000527237 TOGARAM1Q9Y4F4 1720 aa24.92■■□□□ 1.58
TRIM3-205ENST00000527237 NCAPD2Q15021 1401 aa24.9■■□□□ 1.58
TRIM3-205ENST00000527237 ITGB4P16144 1822 aa24.89■■□□□ 1.58
TRIM3-205ENST00000527237 KNSTRNQ9Y448 316 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms