RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 USP6P35125 1406 aa18.9■□□□□ 0.62
CLNS1A-207ENST00000527133 SLIT3O75094 1523 aa18.9■□□□□ 0.62
CLNS1A-207ENST00000527133 ZBTB7AO95365 584 aa18.89■□□□□ 0.61
CLNS1A-207ENST00000527133 PROM2Q8N271 834 aa18.88■□□□□ 0.61
CLNS1A-207ENST00000527133 MARCH10Q8NA82 808 aaPredicted RBP18.88■□□□□ 0.61
CLNS1A-207ENST00000527133 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
CLNS1A-207ENST00000527133 WDR17Q8IZU2 1322 aa18.87■□□□□ 0.61
CLNS1A-207ENST00000527133 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
CLNS1A-207ENST00000527133 ATF5Q9Y2D1 282 aaPredicted RBP18.86■□□□□ 0.61
CLNS1A-207ENST00000527133 WNK3Q9BYP7 1800 aa18.86■□□□□ 0.61
CLNS1A-207ENST00000527133 COL18A1P39060 1754 aa18.86■□□□□ 0.61
CLNS1A-207ENST00000527133 MYOM1P52179 1685 aa18.85■□□□□ 0.61
CLNS1A-207ENST00000527133 PIK3C2AO00443 1686 aa18.85■□□□□ 0.61
CLNS1A-207ENST00000527133 QRICH2Q9H0J4 1663 aa18.85■□□□□ 0.61
CLNS1A-207ENST00000527133 AKAP12Q02952 1782 aa18.84■□□□□ 0.61
CLNS1A-207ENST00000527133 PTGER2P43116 358 aa18.84■□□□□ 0.61
CLNS1A-207ENST00000527133 CDCA7Q9BWT1 371 aaPredicted RBP18.84■□□□□ 0.61
CLNS1A-207ENST00000527133 BCL9O00512 1426 aa18.83■□□□□ 0.61
CLNS1A-207ENST00000527133 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.61
CLNS1A-207ENST00000527133 SOX12O15370 315 aa18.83■□□□□ 0.6
CLNS1A-207ENST00000527133 TXNRD1Q16881 649 aa18.83■□□□□ 0.6
CLNS1A-207ENST00000527133 STK32BQ9NY57 414 aa18.83■□□□□ 0.6
CLNS1A-207ENST00000527133 CSB-PGBD3P0DP91 1061 aa18.82■□□□□ 0.6
CLNS1A-207ENST00000527133 ARHGEF25Q86VW2 580 aa18.81■□□□□ 0.6
CLNS1A-207ENST00000527133 ZNF784Q8NCA9 323 aaPredicted RBP18.81■□□□□ 0.6
CLNS1A-207ENST00000527133 CARD10Q9BWT7 1032 aa18.81■□□□□ 0.6
CLNS1A-207ENST00000527133 SLC15A2Q16348 729 aa18.8■□□□□ 0.6
CLNS1A-207ENST00000527133 FHDC1Q9C0D6 1143 aaPredicted RBP18.8■□□□□ 0.6
CLNS1A-207ENST00000527133 EXOC5O00471 708 aa18.79■□□□□ 0.6
CLNS1A-207ENST00000527133 KCNH5Q8NCM2 988 aa18.79■□□□□ 0.6
CLNS1A-207ENST00000527133 RGPD5Q99666 1765 aa18.78■□□□□ 0.6
CLNS1A-207ENST00000527133 SYT17Q9BSW7 474 aa18.78■□□□□ 0.6
CLNS1A-207ENST00000527133 TTC21BQ7Z4L5 1316 aa18.77■□□□□ 0.6
CLNS1A-207ENST00000527133 EVC2Q86UK5 1308 aa18.77■□□□□ 0.6
CLNS1A-207ENST00000527133 MTFR1LQ9H019 292 aa18.77■□□□□ 0.6
CLNS1A-207ENST00000527133 TNS2Q63HR2 1409 aa18.75■□□□□ 0.59
CLNS1A-207ENST00000527133 CCDC7Q96M83 1385 aa18.75■□□□□ 0.59
CLNS1A-207ENST00000527133 GOLGB1Q14789 3259 aaKnown RBP18.75■□□□□ 0.59
CLNS1A-207ENST00000527133 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
CLNS1A-207ENST00000527133 SGIP1Q9BQI5 828 aa18.74■□□□□ 0.59
CLNS1A-207ENST00000527133 ZNF692Q9BU19 519 aaPredicted RBP18.74■□□□□ 0.59
CLNS1A-207ENST00000527133 NFAT5O94916 1531 aa18.74■□□□□ 0.59
CLNS1A-207ENST00000527133 TRPM1Q7Z4N2 1603 aa18.73■□□□□ 0.59
CLNS1A-207ENST00000527133 TTC21AQ8NDW8 1320 aa18.73■□□□□ 0.59
CLNS1A-207ENST00000527133 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
CLNS1A-207ENST00000527133 ARXQ96QS3 562 aa18.72■□□□□ 0.59
CLNS1A-207ENST00000527133 SENP3-EIF4A1A0A087X0R7 540 aa18.7■□□□□ 0.58
CLNS1A-207ENST00000527133 ABCC6O95255 1503 aa18.69■□□□□ 0.58
CLNS1A-207ENST00000527133 KTN1Q86UP2 1357 aaKnown RBP18.69■□□□□ 0.58
CLNS1A-207ENST00000527133 CHD4Q14839 1912 aa18.68■□□□□ 0.58
CLNS1A-207ENST00000527133 PAPPAQ13219 1627 aa18.68■□□□□ 0.58
CLNS1A-207ENST00000527133 L3MBTL2Q969R5 705 aa18.68■□□□□ 0.58
CLNS1A-207ENST00000527133 NLRP2Q9NX02 1062 aa18.68■□□□□ 0.58
CLNS1A-207ENST00000527133 ZNF827Q17R98 1081 aa18.67■□□□□ 0.58
CLNS1A-207ENST00000527133 ERBB3P21860 1342 aa18.67■□□□□ 0.58
CLNS1A-207ENST00000527133 IL2RBP14784 551 aa18.66■□□□□ 0.58
CLNS1A-207ENST00000527133 C1QTNF8P60827 252 aa18.66■□□□□ 0.58
CLNS1A-207ENST00000527133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLNS1A-207ENST00000527133 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
CLNS1A-207ENST00000527133 BTAF1O14981 1849 aa18.65■□□□□ 0.58
CLNS1A-207ENST00000527133 ROCK2O75116 1388 aaKnown RBP18.65■□□□□ 0.58
CLNS1A-207ENST00000527133 GPR162Q16538 588 aa18.64■□□□□ 0.57
CLNS1A-207ENST00000527133 LRRC4BQ9NT99 713 aa18.64■□□□□ 0.57
CLNS1A-207ENST00000527133 MON2Q7Z3U7 1717 aa18.63■□□□□ 0.57
CLNS1A-207ENST00000527133 KLHL34Q8N239 644 aa18.63■□□□□ 0.57
CLNS1A-207ENST00000527133 CEP350Q5VT06 3117 aa18.62■□□□□ 0.57
CLNS1A-207ENST00000527133 NME9Q86XW9 330 aa18.62■□□□□ 0.57
CLNS1A-207ENST00000527133 ANKRD24Q8TF21 1146 aa18.62■□□□□ 0.57
CLNS1A-207ENST00000527133 USP31Q70CQ4 1352 aa18.62■□□□□ 0.57
CLNS1A-207ENST00000527133 KAT6BQ8WYB5 2073 aa18.62■□□□□ 0.57
CLNS1A-207ENST00000527133 LTN1O94822 1766 aa18.6■□□□□ 0.57
CLNS1A-207ENST00000527133 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
CLNS1A-207ENST00000527133 AKT1S1Q96B36 256 aa18.6■□□□□ 0.57
CLNS1A-207ENST00000527133 POLD1P28340 1107 aa18.59■□□□□ 0.57
CLNS1A-207ENST00000527133 USP54Q70EL1 1684 aa18.59■□□□□ 0.57
CLNS1A-207ENST00000527133 SBNO2Q9Y2G9 1366 aa18.58■□□□□ 0.57
CLNS1A-207ENST00000527133 DDX54Q8TDD1 881 aaKnown RBP18.58■□□□□ 0.56
CLNS1A-207ENST00000527133 SLC16A10Q8TF71 515 aa18.58■□□□□ 0.56
CLNS1A-207ENST00000527133 GIGYF1O75420 1035 aaPredicted RBP18.57■□□□□ 0.56
CLNS1A-207ENST00000527133 SLC27A3Q5K4L6 730 aa18.57■□□□□ 0.56
CLNS1A-207ENST00000527133 TMC1Q8TDI8 760 aa18.57■□□□□ 0.56
CLNS1A-207ENST00000527133 SIN3AQ96ST3 1273 aa18.57■□□□□ 0.56
CLNS1A-207ENST00000527133 CD163L1Q9NR16 1453 aa18.57■□□□□ 0.56
CLNS1A-207ENST00000527133 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
CLNS1A-207ENST00000527133 KCNQ4P56696 695 aa18.55■□□□□ 0.56
CLNS1A-207ENST00000527133 TFCP2L1Q9NZI6 479 aa18.55■□□□□ 0.56
CLNS1A-207ENST00000527133 QSER1Q2KHR3 1735 aa18.54■□□□□ 0.56
CLNS1A-207ENST00000527133 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
CLNS1A-207ENST00000527133 HDGFL2Q7Z4V5 671 aaPredicted RBP18.54■□□□□ 0.56
CLNS1A-207ENST00000527133 NLGN2Q8NFZ4 835 aa18.54■□□□□ 0.56
CLNS1A-207ENST00000527133 SYTL4Q96C24 671 aaPredicted RBP18.54■□□□□ 0.56
CLNS1A-207ENST00000527133 LTV1Q96GA3 475 aaPredicted RBP18.54■□□□□ 0.56
CLNS1A-207ENST00000527133 SLC12A5Q9H2X9 1139 aa18.53■□□□□ 0.56
CLNS1A-207ENST00000527133 EDC4Q6P2E9 1401 aaKnown RBP18.52■□□□□ 0.56
CLNS1A-207ENST00000527133 TUBGCP6Q96RT7 1819 aa18.52■□□□□ 0.56
CLNS1A-207ENST00000527133 COL24A1Q17RW2 1714 aa18.52■□□□□ 0.55
CLNS1A-207ENST00000527133 PRIM1P49642 420 aaKnown RBP18.51■□□□□ 0.55
CLNS1A-207ENST00000527133 IP6K1Q92551 441 aa18.51■□□□□ 0.55
CLNS1A-207ENST00000527133 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
CLNS1A-207ENST00000527133 SHANK3Q9BYB0 1731 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms