RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 MTHFSP49914 203 aa22.34■■□□□ 1.17
CAPN1-205ENST00000526954 CHRNA2Q15822 529 aa22.34■■□□□ 1.17
CAPN1-205ENST00000526954 FLT4P35916 1363 aa22.34■■□□□ 1.17
CAPN1-205ENST00000526954 NWD2Q9ULI1 1742 aa22.34■■□□□ 1.17
CAPN1-205ENST00000526954 HOXC9P31274 260 aa22.33■■□□□ 1.17
CAPN1-205ENST00000526954 CDK12Q9NYV4 1490 aaPredicted RBP22.33■■□□□ 1.16
CAPN1-205ENST00000526954 BLMP54132 1417 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-205ENST00000526954 SLIT2O94813 1529 aa22.32■■□□□ 1.16
CAPN1-205ENST00000526954 ZBTB7CA1YPR0 619 aa22.32■■□□□ 1.16
CAPN1-205ENST00000526954 MEX3CQ5U5Q3 659 aaKnown RBP22.32■■□□□ 1.16
CAPN1-205ENST00000526954 CAMTA1Q9Y6Y1 1673 aa22.32■■□□□ 1.16
CAPN1-205ENST00000526954 INSRP06213 1382 aa22.31■■□□□ 1.16
CAPN1-205ENST00000526954 AXIN2Q9Y2T1 843 aa22.31■■□□□ 1.16
CAPN1-205ENST00000526954 PPM1GO15355 546 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-205ENST00000526954 FNBP4Q8N3X1 1017 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-205ENST00000526954 NGLY1Q96IV0 654 aa22.3■■□□□ 1.16
CAPN1-205ENST00000526954 C8orf37Q96NL8 207 aa22.3■■□□□ 1.16
CAPN1-205ENST00000526954 NRAPQ86VF7 1730 aa22.29■■□□□ 1.16
CAPN1-205ENST00000526954 HSP90AB2PQ58FF8 381 aa22.28■■□□□ 1.16
CAPN1-205ENST00000526954 BTG4Q9NY30 223 aa22.28■■□□□ 1.16
CAPN1-205ENST00000526954 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.27■■□□□ 1.16
CAPN1-205ENST00000526954 COL5A2P05997 1499 aaPredicted RBP22.27■■□□□ 1.16
CAPN1-205ENST00000526954 BCL9LQ86UU0 1499 aa22.26■■□□□ 1.15
CAPN1-205ENST00000526954 CFAP53Q96M91 514 aa22.25■■□□□ 1.15
CAPN1-205ENST00000526954 COL3A1P02461 1466 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-205ENST00000526954 FAM208AQ9UK61 1670 aaKnown RBP22.24■■□□□ 1.15
CAPN1-205ENST00000526954 ERBB3P21860 1342 aa22.24■■□□□ 1.15
CAPN1-205ENST00000526954 AFF2P51816 1311 aa22.24■■□□□ 1.15
CAPN1-205ENST00000526954 UNC5CLQ8IV45 518 aa22.23■■□□□ 1.15
CAPN1-205ENST00000526954 ANKRD24Q8TF21 1146 aa22.23■■□□□ 1.15
CAPN1-205ENST00000526954 USP21Q9UK80 565 aa22.22■■□□□ 1.15
CAPN1-205ENST00000526954 WDR17Q8IZU2 1322 aa22.22■■□□□ 1.15
CAPN1-205ENST00000526954 EVA1CP58658 441 aa22.21■■□□□ 1.15
CAPN1-205ENST00000526954 EIF4A2Q14240 407 aaKnown RBP22.21■■□□□ 1.15
CAPN1-205ENST00000526954 RGPD2P0DJD1 1756 aa22.2■■□□□ 1.14
CAPN1-205ENST00000526954 DIAPH1O60610 1272 aaKnown RBP22.2■■□□□ 1.14
CAPN1-205ENST00000526954 IL13P35225 146 aa22.2■■□□□ 1.14
CAPN1-205ENST00000526954 LTV1Q96GA3 475 aaPredicted RBP22.19■■□□□ 1.14
CAPN1-205ENST00000526954 STRN4Q9NRL3 753 aa22.19■■□□□ 1.14
CAPN1-205ENST00000526954 RGPD1P0DJD0 1748 aa22.18■■□□□ 1.14
CAPN1-205ENST00000526954 LARP1Q6PKG0 1096 aaKnown RBP22.18■■□□□ 1.14
CAPN1-205ENST00000526954 MIER1Q8N108 512 aa22.18■■□□□ 1.14
CAPN1-205ENST00000526954 CRB1P82279 1406 aa22.17■■□□□ 1.14
CAPN1-205ENST00000526954 CSB-PGBD3P0DP91 1061 aa22.17■■□□□ 1.14
CAPN1-205ENST00000526954 VPS72Q15906 364 aa22.17■■□□□ 1.14
CAPN1-205ENST00000526954 CCER2I3L3R5 266 aa22.16■■□□□ 1.14
CAPN1-205ENST00000526954 ZNF772Q68DY9 489 aaPredicted RBP22.16■■□□□ 1.14
CAPN1-205ENST00000526954 ATRNO75882 1429 aa22.15■■□□□ 1.14
CAPN1-205ENST00000526954 CCDC184Q52MB2 194 aa22.15■■□□□ 1.14
CAPN1-205ENST00000526954 TOM1L2Q6ZVM7 507 aa22.15■■□□□ 1.14
CAPN1-205ENST00000526954 CARD10Q9BWT7 1032 aa22.15■■□□□ 1.14
CAPN1-205ENST00000526954 NCAPD2Q15021 1401 aa22.14■■□□□ 1.14
CAPN1-205ENST00000526954 NBPF6Q5VWK0 638 aa22.14■■□□□ 1.13
CAPN1-205ENST00000526954 NBPF4Q96M43 638 aa22.14■■□□□ 1.13
CAPN1-205ENST00000526954 EYA1Q99502 592 aa22.14■■□□□ 1.13
CAPN1-205ENST00000526954 TRPC5Q9UL62 973 aaPredicted RBP22.14■■□□□ 1.13
CAPN1-205ENST00000526954 NUDCQ9Y266 331 aa22.14■■□□□ 1.13
CAPN1-205ENST00000526954 SPATA31A5Q5VU36 1347 aa22.13■■□□□ 1.13
CAPN1-205ENST00000526954 SPATA31A7Q8IWB4 1347 aa22.13■■□□□ 1.13
CAPN1-205ENST00000526954 IGSF1Q8N6C5 1336 aa22.13■■□□□ 1.13
CAPN1-205ENST00000526954 NLRP2Q9NX02 1062 aa22.13■■□□□ 1.13
CAPN1-205ENST00000526954 SPATA31A1Q5TZJ5 1347 aa22.12■■□□□ 1.13
CAPN1-205ENST00000526954 MRS2Q9HD23 443 aa22.12■■□□□ 1.13
CAPN1-205ENST00000526954 RGS17Q9UGC6 210 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-205ENST00000526954 QTRT2Q9H974 415 aaKnown RBP22.11■■□□□ 1.13
CAPN1-205ENST00000526954 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
CAPN1-205ENST00000526954 THRAP3Q9Y2W1 955 aaKnown RBP22.1■■□□□ 1.13
CAPN1-205ENST00000526954 TCP11L2Q8N4U5 519 aa22.09■■□□□ 1.13
CAPN1-205ENST00000526954 GJD4Q96KN9 370 aaPredicted RBP22.09■■□□□ 1.13
CAPN1-205ENST00000526954 KDRP35968 1356 aa22.09■■□□□ 1.13
CAPN1-205ENST00000526954 GLI3P10071 1580 aa22.08■■□□□ 1.13
CAPN1-205ENST00000526954 WNK3Q9BYP7 1800 aa22.08■■□□□ 1.13
CAPN1-205ENST00000526954 U2SURPO15042 1029 aaKnown RBP22.08■■□□□ 1.13
CAPN1-205ENST00000526954 CCDC9Q9Y3X0 531 aaKnown RBP22.08■■□□□ 1.13
CAPN1-205ENST00000526954 BARGINQ6ZT62 677 aa22.07■■□□□ 1.12
CAPN1-205ENST00000526954 PNISRQ8TF01 805 aaKnown RBP22.07■■□□□ 1.12
CAPN1-205ENST00000526954 U2AF1L5P0DN76 240 aaPredicted RBP22.06■■□□□ 1.12
CAPN1-205ENST00000526954 U2AF1Q01081 240 aaKnown RBP eCLIP22.06■■□□□ 1.12
CAPN1-205ENST00000526954 SULT6B1Q6IMI4 303 aa22.06■■□□□ 1.12
CAPN1-205ENST00000526954 USHBP1Q8N6Y0 703 aa22.06■■□□□ 1.12
CAPN1-205ENST00000526954 USP35Q9P2H5 1018 aa22.06■■□□□ 1.12
CAPN1-205ENST00000526954 FCHSD2O94868 740 aa22.04■■□□□ 1.12
CAPN1-205ENST00000526954 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.12
CAPN1-205ENST00000526954 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
CAPN1-205ENST00000526954 DISP2A7MBM2 1401 aa22.04■■□□□ 1.12
CAPN1-205ENST00000526954 PLEKHG2Q9H7P9 1386 aa22.03■■□□□ 1.12
CAPN1-205ENST00000526954 ONECUT3O60422 494 aaPredicted RBP22.03■■□□□ 1.12
CAPN1-205ENST00000526954 RBM6P78332 1123 aaKnown RBP22.03■■□□□ 1.12
CAPN1-205ENST00000526954 CDCA7Q9BWT1 371 aaPredicted RBP22.03■■□□□ 1.12
CAPN1-205ENST00000526954 PARP4Q9UKK3 1724 aaKnown RBP22.03■■□□□ 1.12
CAPN1-205ENST00000526954 HMOX1P09601 288 aa22.02■■□□□ 1.12
CAPN1-205ENST00000526954 IL2RBP14784 551 aa22.02■■□□□ 1.12
CAPN1-205ENST00000526954 POTEAQ6S8J7 498 aa22.02■■□□□ 1.12
CAPN1-205ENST00000526954 RSPH6AQ9H0K4 717 aa22.02■■□□□ 1.12
CAPN1-205ENST00000526954 ADAMTS8Q9UP79 889 aa22.02■■□□□ 1.12
CAPN1-205ENST00000526954 RAPGEF4Q8WZA2 1011 aa22.01■■□□□ 1.11
CAPN1-205ENST00000526954 THSD7AQ9UPZ6 1657 aa22.01■■□□□ 1.11
CAPN1-205ENST00000526954 MEGF6O75095 1541 aa22.01■■□□□ 1.11
CAPN1-205ENST00000526954 RXRBP28702 533 aa21.99■■□□□ 1.11
CAPN1-205ENST00000526954 FAM98CQ17RN3 349 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms