RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 WNK3Q9BYP7 1800 aa20.27■□□□□ 0.84
SSRP1-203ENST00000526696 POLR3AO14802 1390 aaPredicted RBP20.26■□□□□ 0.83
SSRP1-203ENST00000526696 AKAP12Q02952 1782 aa20.25■□□□□ 0.83
SSRP1-203ENST00000526696 PAPPAQ13219 1627 aa20.24■□□□□ 0.83
SSRP1-203ENST00000526696 AATKQ6ZMQ8 1374 aa20.23■□□□□ 0.83
SSRP1-203ENST00000526696 GCP02774 474 aa20.23■□□□□ 0.83
SSRP1-203ENST00000526696 ABTB2Q8N961 1025 aa20.23■□□□□ 0.83
SSRP1-203ENST00000526696 MPHOSPH9Q99550 1183 aa20.23■□□□□ 0.83
SSRP1-203ENST00000526696 ACEP12821 1306 aa20.23■□□□□ 0.83
SSRP1-203ENST00000526696 TOPAZ1Q8N9V7 1692 aa20.22■□□□□ 0.83
SSRP1-203ENST00000526696 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
SSRP1-203ENST00000526696 COL18A1P39060 1754 aa20.19■□□□□ 0.82
SSRP1-203ENST00000526696 HSPA6P17066 643 aa20.18■□□□□ 0.82
SSRP1-203ENST00000526696 ZNF827Q17R98 1081 aa20.18■□□□□ 0.82
SSRP1-203ENST00000526696 NLGN2Q8NFZ4 835 aa20.18■□□□□ 0.82
SSRP1-203ENST00000526696 COL24A1Q17RW2 1714 aa20.18■□□□□ 0.82
SSRP1-203ENST00000526696 ARHGEF28Q8N1W1 1705 aaKnown RBP20.17■□□□□ 0.82
SSRP1-203ENST00000526696 TOM1L2Q6ZVM7 507 aa20.17■□□□□ 0.82
SSRP1-203ENST00000526696 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
SSRP1-203ENST00000526696 YBX3P16989 372 aaKnown RBP eCLIP20.16■□□□□ 0.823e-7■■□□□ 13.3
SSRP1-203ENST00000526696 KLHL34Q8N239 644 aa20.16■□□□□ 0.82
SSRP1-203ENST00000526696 CDK19Q9BWU1 502 aa20.16■□□□□ 0.82
SSRP1-203ENST00000526696 ATP10DQ9P241 1426 aa20.16■□□□□ 0.82
SSRP1-203ENST00000526696 ZBTB7CA1YPR0 619 aa20.15■□□□□ 0.82
SSRP1-203ENST00000526696 NLRP13Q86W25 1043 aa20.15■□□□□ 0.82
SSRP1-203ENST00000526696 AXIN2Q9Y2T1 843 aa20.15■□□□□ 0.82
SSRP1-203ENST00000526696 NHSQ6T4R5 1651 aa20.13■□□□□ 0.81
SSRP1-203ENST00000526696 WDR17Q8IZU2 1322 aa20.12■□□□□ 0.81
SSRP1-203ENST00000526696 CCDC61Q9Y6R9 512 aa20.12■□□□□ 0.81
SSRP1-203ENST00000526696 RGPD5Q99666 1765 aa20.11■□□□□ 0.81
SSRP1-203ENST00000526696 CDCA7Q9BWT1 371 aaPredicted RBP20.11■□□□□ 0.81
SSRP1-203ENST00000526696 LRRC4BQ9NT99 713 aa20.11■□□□□ 0.81
SSRP1-203ENST00000526696 SLIT3O75094 1523 aa20.11■□□□□ 0.81
SSRP1-203ENST00000526696 KAT6BQ8WYB5 2073 aa20.11■□□□□ 0.81
SSRP1-203ENST00000526696 BTAF1O14981 1849 aa20.09■□□□□ 0.81
SSRP1-203ENST00000526696 ACSBG1Q96GR2 724 aa20.09■□□□□ 0.81
SSRP1-203ENST00000526696 QSER1Q2KHR3 1735 aa20.08■□□□□ 0.81
SSRP1-203ENST00000526696 AKT1S1Q96B36 256 aa20.08■□□□□ 0.81
SSRP1-203ENST00000526696 TUBGCP6Q96RT7 1819 aa20.08■□□□□ 0.8
SSRP1-203ENST00000526696 GPBP1L1Q9HC44 474 aaPredicted RBP20.07■□□□□ 0.8
SSRP1-203ENST00000526696 PNPLA7Q6ZV29 1317 aa20.06■□□□□ 0.8
SSRP1-203ENST00000526696 EXOC5O00471 708 aa20.06■□□□□ 0.8
SSRP1-203ENST00000526696 GRIN3BO60391 1043 aa20.06■□□□□ 0.8
SSRP1-203ENST00000526696 POLD1P28340 1107 aa20.06■□□□□ 0.8
SSRP1-203ENST00000526696 SLC16A10Q8TF71 515 aa20.06■□□□□ 0.8
SSRP1-203ENST00000526696 CARD10Q9BWT7 1032 aa20.06■□□□□ 0.8
SSRP1-203ENST00000526696 ADCY9O60503 1353 aa20.06■□□□□ 0.8
SSRP1-203ENST00000526696 TNS2Q63HR2 1409 aa20.05■□□□□ 0.8
SSRP1-203ENST00000526696 NLRP6P59044 892 aa20.04■□□□□ 0.8
SSRP1-203ENST00000526696 KDM2AQ9Y2K7 1162 aa20.04■□□□□ 0.8
SSRP1-203ENST00000526696 USP6P35125 1406 aa20.03■□□□□ 0.8
SSRP1-203ENST00000526696 ZNF526Q8TF50 670 aaPredicted RBP20.03■□□□□ 0.8
SSRP1-203ENST00000526696 CPSF1Q10570 1443 aaKnown RBP20.02■□□□□ 0.8
SSRP1-203ENST00000526696 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.79
SSRP1-203ENST00000526696 PPIP5K1Q6PFW1 1433 aa20.02■□□□□ 0.79
SSRP1-203ENST00000526696 BRD4O60885 1362 aaPredicted RBP20.01■□□□□ 0.79
SSRP1-203ENST00000526696 PIK3C2AO00443 1686 aa20■□□□□ 0.79
SSRP1-203ENST00000526696 ARHGEF25Q86VW2 580 aa20■□□□□ 0.79
SSRP1-203ENST00000526696 ABCC6O95255 1503 aa20■□□□□ 0.79
SSRP1-203ENST00000526696 DNAJC5GQ8N7S2 189 aa19.99■□□□□ 0.79
SSRP1-203ENST00000526696 DCAF11Q8TEB1 546 aa19.99■□□□□ 0.79
SSRP1-203ENST00000526696 CSB-PGBD3P0DP91 1061 aa19.97■□□□□ 0.79
SSRP1-203ENST00000526696 KIF3CO14782 793 aa19.96■□□□□ 0.79
SSRP1-203ENST00000526696 KCNQ4P56696 695 aa19.96■□□□□ 0.79
SSRP1-203ENST00000526696 CCDC7Q96M83 1385 aa19.95■□□□□ 0.79
SSRP1-203ENST00000526696 COL13A1Q5TAT6 717 aaPredicted RBP19.95■□□□□ 0.78
SSRP1-203ENST00000526696 CABP2Q9NPB3 220 aa19.94■□□□□ 0.78
SSRP1-203ENST00000526696 CAPN15O75808 1086 aa19.93■□□□□ 0.78
SSRP1-203ENST00000526696 TFCP2L1Q9NZI6 479 aa19.93■□□□□ 0.78
SSRP1-203ENST00000526696 SLC27A3Q5K4L6 730 aa19.92■□□□□ 0.78
SSRP1-203ENST00000526696 SOX12O15370 315 aa19.91■□□□□ 0.78
SSRP1-203ENST00000526696 APLP1P51693 650 aa19.91■□□□□ 0.78
SSRP1-203ENST00000526696 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
SSRP1-203ENST00000526696 CABP1Q9NZU7 370 aa19.91■□□□□ 0.78
SSRP1-203ENST00000526696 NFAT5O94916 1531 aa19.9■□□□□ 0.78
SSRP1-203ENST00000526696 PCNTO95613 3336 aa19.89■□□□□ 0.78
SSRP1-203ENST00000526696 COL23A1Q86Y22 540 aaPredicted RBP19.88■□□□□ 0.77
SSRP1-203ENST00000526696 QRICH2Q9H0J4 1663 aa19.87■□□□□ 0.77
SSRP1-203ENST00000526696 MSL1Q68DK7 614 aa19.87■□□□□ 0.77
SSRP1-203ENST00000526696 LY75O60449 1722 aa19.87■□□□□ 0.77
SSRP1-203ENST00000526696 KCNH5Q8NCM2 988 aa19.86■□□□□ 0.77
SSRP1-203ENST00000526696 IL2RBP14784 551 aa19.85■□□□□ 0.77
SSRP1-203ENST00000526696 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
SSRP1-203ENST00000526696 CD2APQ9Y5K6 639 aa19.85■□□□□ 0.77
SSRP1-203ENST00000526696 ERBB3P21860 1342 aa19.83■□□□□ 0.77
SSRP1-203ENST00000526696 TTC21BQ7Z4L5 1316 aa19.83■□□□□ 0.77
SSRP1-203ENST00000526696 PRELPP51888 382 aa19.83■□□□□ 0.77
SSRP1-203ENST00000526696 NLRP2Q9NX02 1062 aa19.83■□□□□ 0.77
SSRP1-203ENST00000526696 WDR90Q96KV7 1748 aa19.82■□□□□ 0.76
SSRP1-203ENST00000526696 NBPF1Q3BBV0 1214 aa19.82■□□□□ 0.76
SSRP1-203ENST00000526696 WWC3Q9ULE0 1092 aa19.82■□□□□ 0.76
SSRP1-203ENST00000526696 NSD2O96028 1365 aa19.82■□□□□ 0.76
SSRP1-203ENST00000526696 MSH5O43196 834 aa19.81■□□□□ 0.76
SSRP1-203ENST00000526696 HTRA3P83110 453 aa19.8■□□□□ 0.76
SSRP1-203ENST00000526696 KIAA1210Q9ULL0 1709 aa19.79■□□□□ 0.76
SSRP1-203ENST00000526696 JMYQ8N9B5 988 aa19.79■□□□□ 0.76
SSRP1-203ENST00000526696 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
SSRP1-203ENST00000526696 TOMM70O94826 608 aa19.78■□□□□ 0.76
SSRP1-203ENST00000526696 PRIM1P49642 420 aaKnown RBP19.78■□□□□ 0.76
SSRP1-203ENST00000526696 TNS4Q8IZW8 715 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms