RNA–Protein interactions for RNA: ENST00000526504.5

ME3-205, Transcript of malic enzyme 3, humanhuman

TSL 2

Gene ME3, Length 1,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-205ENST00000526504 TSHZ2Q9NRE2 1034 aa29.46■■■□□ 2.31
ME3-205ENST00000526504 ABCA3Q99758 1704 aa29.46■■■□□ 2.31
ME3-205ENST00000526504 RRS1Q15050 365 aaKnown RBP29.44■■■□□ 2.3
ME3-205ENST00000526504 RRP1P56182 461 aaKnown RBP29.44■■■□□ 2.3
ME3-205ENST00000526504 ZC3H6P61129 1189 aaKnown RBP29.44■■■□□ 2.3
ME3-205ENST00000526504 SPATA31A6Q5VVP1 1343 aa29.43■■■□□ 2.3
ME3-205ENST00000526504 CFAP53Q96M91 514 aa29.42■■■□□ 2.3
ME3-205ENST00000526504 POLKQ9UBT6 870 aa29.42■■■□□ 2.3
ME3-205ENST00000526504 NUTM2BA6NNL0 878 aaPredicted RBP29.41■■■□□ 2.3
ME3-205ENST00000526504 NUTM2EB1AL46 878 aaPredicted RBP29.41■■■□□ 2.3
ME3-205ENST00000526504 NUTM2AQ8IVF1 878 aaPredicted RBP29.41■■■□□ 2.3
ME3-205ENST00000526504 MAP3K19Q56UN5 1328 aa29.41■■■□□ 2.3
ME3-205ENST00000526504 MTHFSP49914 203 aa29.41■■■□□ 2.3
ME3-205ENST00000526504 ARHGEF25Q86VW2 580 aa29.41■■■□□ 2.3
ME3-205ENST00000526504 GOLGA2Q08379 1002 aa29.4■■■□□ 2.3
ME3-205ENST00000526504 EMILIN1Q9Y6C2 1016 aa29.4■■■□□ 2.3
ME3-205ENST00000526504 CPDO75976 1380 aa29.4■■■□□ 2.3
ME3-205ENST00000526504 KIAA0232Q92628 1395 aa29.39■■■□□ 2.3
ME3-205ENST00000526504 ZBTB7CA1YPR0 619 aa29.39■■■□□ 2.3
ME3-205ENST00000526504 PPM1GO15355 546 aaPredicted RBP29.39■■■□□ 2.3
ME3-205ENST00000526504 MAP2P11137 1827 aaKnown RBP29.39■■■□□ 2.29
ME3-205ENST00000526504 CCDC146Q8IYE0 955 aa29.38■■■□□ 2.29
ME3-205ENST00000526504 APAF1O14727 1248 aa29.37■■■□□ 2.29
ME3-205ENST00000526504 AMPHP49418 695 aa29.37■■■□□ 2.29
ME3-205ENST00000526504 PRDM11Q9NQV5 511 aa29.37■■■□□ 2.29
ME3-205ENST00000526504 DUSP27Q5VZP5 1158 aa29.36■■■□□ 2.29
ME3-205ENST00000526504 LTN1O94822 1766 aa29.36■■■□□ 2.29
ME3-205ENST00000526504 TRMT2AQ8IZ69 625 aaKnown RBP29.36■■■□□ 2.29
ME3-205ENST00000526504 ADAMTS2O95450 1211 aa29.35■■■□□ 2.29
ME3-205ENST00000526504 KIF24Q5T7B8 1368 aa29.35■■■□□ 2.29
ME3-205ENST00000526504 SLFN5Q08AF3 891 aa29.34■■■□□ 2.29
ME3-205ENST00000526504 RTL1A6NKG5 1358 aa29.33■■■□□ 2.29
ME3-205ENST00000526504 FLT4P35916 1363 aa29.33■■■□□ 2.29
ME3-205ENST00000526504 CHRNA2Q15822 529 aa29.33■■■□□ 2.29
ME3-205ENST00000526504 NCBP3Q53F19 620 aaKnown RBP29.32■■■□□ 2.28
ME3-205ENST00000526504 B4GALNT3Q6L9W6 998 aa29.32■■■□□ 2.28
ME3-205ENST00000526504 HOXC9P31274 260 aa29.31■■■□□ 2.28
ME3-205ENST00000526504 IP6K1Q92551 441 aa29.31■■■□□ 2.28
ME3-205ENST00000526504 RUNDC1Q96C34 613 aa29.31■■■□□ 2.28
ME3-205ENST00000526504 CDK12Q9NYV4 1490 aaPredicted RBP29.31■■■□□ 2.28
ME3-205ENST00000526504 LRP6O75581 1613 aa29.31■■■□□ 2.28
ME3-205ENST00000526504 PEAK1Q9H792 1746 aa29.31■■■□□ 2.28
ME3-205ENST00000526504 COL3A1P02461 1466 aaPredicted RBP29.3■■■□□ 2.28
ME3-205ENST00000526504 FAM83GA6ND36 823 aa29.3■■■□□ 2.28
ME3-205ENST00000526504 HSP90AB2PQ58FF8 381 aa29.29■■■□□ 2.28
ME3-205ENST00000526504 ABCC6O95255 1503 aa29.28■■■□□ 2.28
ME3-205ENST00000526504 E9PSI1 815 aa29.26■■■□□ 2.28
ME3-205ENST00000526504 AXIN2Q9Y2T1 843 aa29.26■■■□□ 2.28
ME3-205ENST00000526504 COL18A1P39060 1754 aa29.25■■■□□ 2.27
ME3-205ENST00000526504 COL14A1Q05707 1796 aaKnown RBP29.25■■■□□ 2.27
ME3-205ENST00000526504 MEX3CQ5U5Q3 659 aaKnown RBP29.25■■■□□ 2.27
ME3-205ENST00000526504 ILDR1Q86SU0 546 aaPredicted RBP29.24■■■□□ 2.27
ME3-205ENST00000526504 PHF23Q9BUL5 403 aaPredicted RBP29.24■■■□□ 2.27
ME3-205ENST00000526504 C8orf37Q96NL8 207 aa29.23■■■□□ 2.27
ME3-205ENST00000526504 LMO7Q8WWI1 1683 aa29.23■■■□□ 2.27
ME3-205ENST00000526504 CCDC27Q2M243 656 aa29.21■■■□□ 2.27
ME3-205ENST00000526504 WWC1Q8IX03 1113 aa29.21■■■□□ 2.27
ME3-205ENST00000526504 CCDC136Q96JN2 1154 aa29.21■■■□□ 2.27
ME3-205ENST00000526504 CAMTA1Q9Y6Y1 1673 aa29.21■■■□□ 2.27
ME3-205ENST00000526504 NGLY1Q96IV0 654 aa29.21■■■□□ 2.27
ME3-205ENST00000526504 BTG4Q9NY30 223 aa29.21■■■□□ 2.27
ME3-205ENST00000526504 DIAPH1O60610 1272 aaKnown RBP29.2■■■□□ 2.26
ME3-205ENST00000526504 LTV1Q96GA3 475 aaPredicted RBP29.2■■■□□ 2.26
ME3-205ENST00000526504 TCP11L2Q8N4U5 519 aa29.19■■■□□ 2.26
ME3-205ENST00000526504 EIF4A2Q14240 407 aaKnown RBP29.18■■■□□ 2.26
ME3-205ENST00000526504 ANKRD24Q8TF21 1146 aa29.18■■■□□ 2.26
ME3-205ENST00000526504 SPINK5Q9NQ38 1064 aaPredicted RBP29.18■■■□□ 2.26
ME3-205ENST00000526504 RGPD5Q99666 1765 aa29.17■■■□□ 2.26
ME3-205ENST00000526504 ERBB3P21860 1342 aa29.17■■■□□ 2.26
ME3-205ENST00000526504 PLCH1Q4KWH8 1693 aa29.16■■■□□ 2.26
ME3-205ENST00000526504 COL5A2P05997 1499 aaPredicted RBP29.16■■■□□ 2.26
ME3-205ENST00000526504 U2AF1L5P0DN76 240 aaPredicted RBP29.16■■■□□ 2.26
ME3-205ENST00000526504 IL13P35225 146 aa29.16■■■□□ 2.26
ME3-205ENST00000526504 U2AF1Q01081 240 aaKnown RBP eCLIP29.16■■■□□ 2.26
ME3-205ENST00000526504 EXOC6Q8TAG9 804 aa29.16■■■□□ 2.26
ME3-205ENST00000526504 SLIT2O94813 1529 aa29.16■■■□□ 2.26
ME3-205ENST00000526504 EVA1CP58658 441 aa29.16■■■□□ 2.26
ME3-205ENST00000526504 WDR63Q8IWG1 891 aa29.16■■■□□ 2.26
ME3-205ENST00000526504 CSB-PGBD3P0DP91 1061 aa29.14■■■□□ 2.26
ME3-205ENST00000526504 FNBP4Q8N3X1 1017 aaPredicted RBP29.14■■■□□ 2.26
ME3-205ENST00000526504 STRN4Q9NRL3 753 aa29.14■■■□□ 2.26
ME3-205ENST00000526504 NWD2Q9ULI1 1742 aa29.12■■■□□ 2.25
ME3-205ENST00000526504 WDR17Q8IZU2 1322 aa29.11■■■□□ 2.25
ME3-205ENST00000526504 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.11■■■□□ 2.25
ME3-205ENST00000526504 U2SURPO15042 1029 aaKnown RBP29.11■■■□□ 2.25
ME3-205ENST00000526504 PLEKHF1Q96S99 279 aa29.11■■■□□ 2.25
ME3-205ENST00000526504 AFF2P51816 1311 aa29.09■■■□□ 2.25
ME3-205ENST00000526504 PLIN1O60240 522 aa29.09■■■□□ 2.25
ME3-205ENST00000526504 UNC5CLQ8IV45 518 aa29.09■■■□□ 2.25
ME3-205ENST00000526504 NLRP2Q9NX02 1062 aa29.08■■■□□ 2.25
ME3-205ENST00000526504 USP21Q9UK80 565 aa29.08■■■□□ 2.25
ME3-205ENST00000526504 BCL9LQ86UU0 1499 aa29.08■■■□□ 2.25
ME3-205ENST00000526504 LARP1Q6PKG0 1096 aaKnown RBP29.08■■■□□ 2.25
ME3-205ENST00000526504 TOM1L2Q6ZVM7 507 aa29.08■■■□□ 2.25
ME3-205ENST00000526504 EYA1Q99502 592 aa29.08■■■□□ 2.25
ME3-205ENST00000526504 PNNQ9H307 717 aaKnown RBP29.08■■■□□ 2.25
ME3-205ENST00000526504 NRAPQ86VF7 1730 aa29.07■■■□□ 2.24
ME3-205ENST00000526504 NBPF6Q5VWK0 638 aa29.07■■■□□ 2.24
ME3-205ENST00000526504 NBPF4Q96M43 638 aa29.07■■■□□ 2.24
ME3-205ENST00000526504 RRP7AQ9Y3A4 280 aaKnown RBP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms