RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 SPINT1O43278 529 aa11.16□□□□□ -0.62
C11orf54-203ENST00000526335 BAG6P46379 1132 aa11.16□□□□□ -0.62
C11orf54-203ENST00000526335 LYPD8Q6UX82 237 aa11.16□□□□□ -0.62
C11orf54-203ENST00000526335 MAP10Q9P2G4 905 aa11.16□□□□□ -0.62
C11orf54-203ENST00000526335 VASH1Q7L8A9 365 aaPredicted RBP11.16□□□□□ -0.62
C11orf54-203ENST00000526335 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
C11orf54-203ENST00000526335 NEDD1Q8NHV4 660 aa11.16□□□□□ -0.62
C11orf54-203ENST00000526335 CBLBQ13191 982 aa11.15□□□□□ -0.63
C11orf54-203ENST00000526335 FURINP09958 794 aa11.14□□□□□ -0.63
C11orf54-203ENST00000526335 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
C11orf54-203ENST00000526335 GAS6Q14393 721 aa11.13□□□□□ -0.63
C11orf54-203ENST00000526335 SPIRE2Q8WWL2 714 aa11.13□□□□□ -0.63
C11orf54-203ENST00000526335 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
C11orf54-203ENST00000526335 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-203ENST00000526335 CTSOP43234 321 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-203ENST00000526335 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
C11orf54-203ENST00000526335 MAP4K5Q9Y4K4 846 aa11.1□□□□□ -0.63
C11orf54-203ENST00000526335 F12P00748 615 aaPredicted RBP11.09□□□□□ -0.63
C11orf54-203ENST00000526335 Q6ZVU0 165 aa11.09□□□□□ -0.63
C11orf54-203ENST00000526335 PGPEP1Q9NXJ5 209 aa11.09□□□□□ -0.63
C11orf54-203ENST00000526335 C1QTNF2Q9BXJ5 285 aa11.08□□□□□ -0.64
C11orf54-203ENST00000526335 SENP3-EIF4A1A0A087X0R7 540 aa11.07□□□□□ -0.64
C11orf54-203ENST00000526335 LCE3BQ5TA77 95 aa11.07□□□□□ -0.64
C11orf54-203ENST00000526335 CCDC102AQ96A19 550 aa11.07□□□□□ -0.64
C11orf54-203ENST00000526335 BCRP11274 1271 aa11.06□□□□□ -0.64
C11orf54-203ENST00000526335 PPP1R26Q5T8A7 1209 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-203ENST00000526335 INSM2Q96T92 566 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-203ENST00000526335 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
C11orf54-203ENST00000526335 AGBL1Q96MI9 1066 aa11.05□□□□□ -0.64
C11orf54-203ENST00000526335 POLMQ9NP87 494 aaPredicted RBP11.05□□□□□ -0.64
C11orf54-203ENST00000526335 KRBA1A5PL33 1030 aa11.03□□□□□ -0.64
C11orf54-203ENST00000526335 RELBQ01201 579 aa11.03□□□□□ -0.64
C11orf54-203ENST00000526335 MBIPQ9NS73 344 aa11.03□□□□□ -0.64
C11orf54-203ENST00000526335 CUEDC1Q9NWM3 386 aaPredicted RBP11.03□□□□□ -0.64
C11orf54-203ENST00000526335 IGF1RP08069 1367 aa11.03□□□□□ -0.64
C11orf54-203ENST00000526335 MAGEB6P1A0A0J9YX57 407 aa11.03□□□□□ -0.64
C11orf54-203ENST00000526335 CFAP99D6REC4 459 aa11.03□□□□□ -0.64
C11orf54-203ENST00000526335 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
C11orf54-203ENST00000526335 SSTR3P32745 418 aaPredicted RBP11.02□□□□□ -0.65
C11orf54-203ENST00000526335 RNF217Q8TC41 542 aa11.02□□□□□ -0.65
C11orf54-203ENST00000526335 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
C11orf54-203ENST00000526335 ACDQ96AP0 544 aa10.99□□□□□ -0.65
C11orf54-203ENST00000526335 GPR25O00155 361 aa10.98□□□□□ -0.65
C11orf54-203ENST00000526335 CARD14Q9BXL6 1004 aa10.98□□□□□ -0.65
C11orf54-203ENST00000526335 ZNF395Q9H8N7 513 aaPredicted RBP10.98□□□□□ -0.65
C11orf54-203ENST00000526335 PER1O15534 1290 aaPredicted RBP10.96□□□□□ -0.65
C11orf54-203ENST00000526335 NBPF14Q5TI25 921 aa10.96□□□□□ -0.65
C11orf54-203ENST00000526335 FOXR1Q6PIV2 292 aa10.96□□□□□ -0.65
C11orf54-203ENST00000526335 SH3BP5LQ7L8J4 393 aa10.95□□□□□ -0.66
C11orf54-203ENST00000526335 KRTAP4-12Q9BQ66 201 aa10.95□□□□□ -0.66
C11orf54-203ENST00000526335 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
C11orf54-203ENST00000526335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.94□□□□□ -0.66
C11orf54-203ENST00000526335 ZNF837Q96EG3 531 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-203ENST00000526335 HRCP23327 699 aa10.92□□□□□ -0.66
C11orf54-203ENST00000526335 SNRPNP63162 240 aaKnown RBP10.92□□□□□ -0.66
C11orf54-203ENST00000526335 ERFEQ4G0M1 354 aa10.91□□□□□ -0.66
C11orf54-203ENST00000526335 RSBN1LQ6PCB5 846 aaPredicted RBP10.91□□□□□ -0.66
C11orf54-203ENST00000526335 TSC1Q92574 1164 aa10.91□□□□□ -0.66
C11orf54-203ENST00000526335 ZBTB3Q9H5J0 574 aa10.91□□□□□ -0.66
C11orf54-203ENST00000526335 GJA5P36382 358 aa10.9□□□□□ -0.66
C11orf54-203ENST00000526335 DHX9Q08211 1270 aaKnown RBP10.9□□□□□ -0.66
C11orf54-203ENST00000526335 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
C11orf54-203ENST00000526335 LRRC4BQ9NT99 713 aa10.9□□□□□ -0.66
C11orf54-203ENST00000526335 FOXD4L5Q5VV16 416 aaPredicted RBP10.9□□□□□ -0.67
C11orf54-203ENST00000526335 LYSMD3Q7Z3D4 306 aa10.9□□□□□ -0.67
C11orf54-203ENST00000526335 ALYREFQ86V81 257 aaKnown RBP10.9□□□□□ -0.67
C11orf54-203ENST00000526335 TRIM22Q8IYM9 498 aa10.9□□□□□ -0.67
C11orf54-203ENST00000526335 KCTD15Q96SI1 283 aaPredicted RBP10.9□□□□□ -0.67
C11orf54-203ENST00000526335 BTBD11A6QL63 1104 aa10.89□□□□□ -0.67
C11orf54-203ENST00000526335 COL8A1P27658 744 aa10.89□□□□□ -0.67
C11orf54-203ENST00000526335 GMCL1Q96IK5 515 aa10.89□□□□□ -0.67
C11orf54-203ENST00000526335 MKL2Q9ULH7 1088 aa10.89□□□□□ -0.67
C11orf54-203ENST00000526335 OIP5O43482 229 aa10.88□□□□□ -0.67
C11orf54-203ENST00000526335 ZMYM1Q5SVZ6 1142 aa10.88□□□□□ -0.67
C11orf54-203ENST00000526335 RIPOR1Q6ZS17 1223 aa10.88□□□□□ -0.67
C11orf54-203ENST00000526335 TTLL12Q14166 644 aaPredicted RBP10.87□□□□□ -0.67
C11orf54-203ENST00000526335 RHOQP17081 205 aa10.86□□□□□ -0.67
C11orf54-203ENST00000526335 DBN1Q16643 649 aa10.86□□□□□ -0.67
C11orf54-203ENST00000526335 CABLES1Q8TDN4 633 aa10.86□□□□□ -0.67
C11orf54-203ENST00000526335 GTPBP3Q969Y2 492 aaKnown RBP10.86□□□□□ -0.67
C11orf54-203ENST00000526335 KRTAP9-9Q9BYP9 154 aa10.86□□□□□ -0.67
C11orf54-203ENST00000526335 KRTAP9-4Q9BYQ2 154 aa10.86□□□□□ -0.67
C11orf54-203ENST00000526335 TBC1D2Q9BYX2 928 aa10.86□□□□□ -0.67
C11orf54-203ENST00000526335 PRICKLE2Q7Z3G6 844 aa10.85□□□□□ -0.67
C11orf54-203ENST00000526335 TRERF1Q96PN7 1200 aa10.85□□□□□ -0.67
C11orf54-203ENST00000526335 SEMA6BQ9H3T3 888 aa10.85□□□□□ -0.67
C11orf54-203ENST00000526335 NSFL1CQ9UNZ2 370 aaKnown RBP10.85□□□□□ -0.67
C11orf54-203ENST00000526335 MX2P20592 715 aa10.84□□□□□ -0.67
C11orf54-203ENST00000526335 ITGB7P26010 798 aa10.84□□□□□ -0.67
C11orf54-203ENST00000526335 GRIN2CQ14957 1233 aa10.84□□□□□ -0.67
C11orf54-203ENST00000526335 BARGINQ6ZT62 677 aa10.84□□□□□ -0.67
C11orf54-203ENST00000526335 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
C11orf54-203ENST00000526335 RRAGCQ9HB90 399 aa10.84□□□□□ -0.67
C11orf54-203ENST00000526335 SLC10A4Q96EP9 437 aa10.83□□□□□ -0.68
C11orf54-203ENST00000526335 AMHR2Q16671 573 aa10.82□□□□□ -0.68
C11orf54-203ENST00000526335 CSPP1Q1MSJ5 1256 aa10.82□□□□□ -0.68
C11orf54-203ENST00000526335 C1QTNF9BB2RNN3 333 aa10.81□□□□□ -0.68
C11orf54-203ENST00000526335 ZMYND10O75800 440 aa10.81□□□□□ -0.68
C11orf54-203ENST00000526335 INTS6LQ5JSJ4 861 aaKnown RBP10.81□□□□□ -0.68
C11orf54-203ENST00000526335 CDV3Q9UKY7 258 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms