RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
COPB1-204ENST00000526191 C11orf95C9JLR9 678 aaPredicted RBP12.2□□□□□ -0.46
COPB1-204ENST00000526191 CCDC116Q8IYX3 515 aa12.2□□□□□ -0.46
COPB1-204ENST00000526191 NDUFB9Q9Y6M9 179 aa12.2□□□□□ -0.46
COPB1-204ENST00000526191 CDV3Q9UKY7 258 aaKnown RBP12.19□□□□□ -0.46
COPB1-204ENST00000526191 INTS6LQ5JSJ4 861 aaKnown RBP12.18□□□□□ -0.46
COPB1-204ENST00000526191 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
COPB1-204ENST00000526191 SNRPBP14678 240 aaKnown RBP12.17□□□□□ -0.46
COPB1-204ENST00000526191 TBC1D2BQ9UPU7 963 aa12.17□□□□□ -0.46
COPB1-204ENST00000526191 PPP1R26Q5T8A7 1209 aaPredicted RBP12.16□□□□□ -0.46
COPB1-204ENST00000526191 TRIM47Q96LD4 638 aa12.16□□□□□ -0.46
COPB1-204ENST00000526191 APBB1O00213 710 aa12.15□□□□□ -0.46
COPB1-204ENST00000526191 MRPL14Q6P1L8 145 aaKnown RBP12.15□□□□□ -0.46
COPB1-204ENST00000526191 ZNF775Q96BV0 537 aaPredicted RBP12.15□□□□□ -0.46
COPB1-204ENST00000526191 SENP2Q9HC62 589 aa12.15□□□□□ -0.46
COPB1-204ENST00000526191 PCDHB9Q9Y5E1 797 aa12.15□□□□□ -0.46
COPB1-204ENST00000526191 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
COPB1-204ENST00000526191 RAB15P59190 212 aa12.14□□□□□ -0.47
COPB1-204ENST00000526191 NR1H3Q13133 447 aa12.14□□□□□ -0.47
COPB1-204ENST00000526191 NBPF20Q3BBV1 942 aa12.13□□□□□ -0.47
COPB1-204ENST00000526191 ZFP42Q96MM3 310 aa12.13□□□□□ -0.47
COPB1-204ENST00000526191 MCM6Q14566 821 aa12.12□□□□□ -0.47
COPB1-204ENST00000526191 PURBQ96QR8 312 aaKnown RBP12.12□□□□□ -0.47
COPB1-204ENST00000526191 ESPNB1AK53 854 aa12.11□□□□□ -0.47
COPB1-204ENST00000526191 MEIOBQ8N635 442 aa12.11□□□□□ -0.47
COPB1-204ENST00000526191 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
COPB1-204ENST00000526191 CBLBQ13191 982 aa12.1□□□□□ -0.47
COPB1-204ENST00000526191 TMPRSS4Q9NRS4 437 aa12.1□□□□□ -0.47
COPB1-204ENST00000526191 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
COPB1-204ENST00000526191 DHX9Q08211 1270 aaKnown RBP12.09□□□□□ -0.47
COPB1-204ENST00000526191 SCARF1Q14162 830 aa12.09□□□□□ -0.47
COPB1-204ENST00000526191 C6orf118Q5T5N4 469 aa12.09□□□□□ -0.47
COPB1-204ENST00000526191 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
COPB1-204ENST00000526191 IRF5Q13568 498 aa12.08□□□□□ -0.48
COPB1-204ENST00000526191 GDPD2Q9HCC8 539 aa12.08□□□□□ -0.48
COPB1-204ENST00000526191 ERVH48-1M5A8F1 160 aa12.07□□□□□ -0.48
COPB1-204ENST00000526191 TMEM132AQ24JP5 1023 aa12.07□□□□□ -0.48
COPB1-204ENST00000526191 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
COPB1-204ENST00000526191 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
COPB1-204ENST00000526191 PRM3Q9NNZ6 103 aa12.05□□□□□ -0.48
COPB1-204ENST00000526191 BMP2P12643 396 aa12.04□□□□□ -0.48
COPB1-204ENST00000526191 ABL2P42684 1182 aa12.04□□□□□ -0.48
COPB1-204ENST00000526191 Q6ZVU0 165 aa12.04□□□□□ -0.48
COPB1-204ENST00000526191 SOBPA7XYQ1 873 aa12.03□□□□□ -0.48
COPB1-204ENST00000526191 ZNF330Q9Y3S2 320 aaPredicted RBP12.03□□□□□ -0.48
COPB1-204ENST00000526191 UPP2O95045 317 aa12.02□□□□□ -0.49
COPB1-204ENST00000526191 SEPT12Q8IYM1 358 aa12.02□□□□□ -0.49
COPB1-204ENST00000526191 AGBL1Q96MI9 1066 aa12.02□□□□□ -0.49
COPB1-204ENST00000526191 LILRA1O75019 489 aa12.01□□□□□ -0.49
COPB1-204ENST00000526191 TSEN34Q9BSV6 310 aaKnown RBP12.01□□□□□ -0.49
COPB1-204ENST00000526191 COG6Q9Y2V7 657 aa12.01□□□□□ -0.49
COPB1-204ENST00000526191 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
COPB1-204ENST00000526191 VAC14Q08AM6 782 aa12□□□□□ -0.49
COPB1-204ENST00000526191 CYLDQ9NQC7 956 aa12□□□□□ -0.49
COPB1-204ENST00000526191 MCCD1P59942 119 aaPredicted RBP11.99□□□□□ -0.49
COPB1-204ENST00000526191 RELBQ01201 579 aa11.99□□□□□ -0.49
COPB1-204ENST00000526191 POM121Q96HA1 1249 aa11.98□□□□□ -0.49
COPB1-204ENST00000526191 SOS2Q07890 1332 aaPredicted RBP11.96□□□□□ -0.49
COPB1-204ENST00000526191 ADH1AP07327 375 aa11.96□□□□□ -0.49
COPB1-204ENST00000526191 ZNF592Q92610 1267 aa11.96□□□□□ -0.49
COPB1-204ENST00000526191 CEP126Q9P2H0 1117 aa11.96□□□□□ -0.49
COPB1-204ENST00000526191 SPINT1O43278 529 aa11.95□□□□□ -0.5
COPB1-204ENST00000526191 NFX1Q12986 1120 aaKnown RBP11.95□□□□□ -0.5
COPB1-204ENST00000526191 RNF20Q5VTR2 975 aa11.95□□□□□ -0.5
COPB1-204ENST00000526191 KDF1Q8NAX2 398 aaPredicted RBP11.95□□□□□ -0.5
COPB1-204ENST00000526191 ZNF395Q9H8N7 513 aaPredicted RBP11.95□□□□□ -0.5
COPB1-204ENST00000526191 TERTO14746 1132 aaKnown RBP11.94□□□□□ -0.5
COPB1-204ENST00000526191 MAN1A2O60476 641 aa11.94□□□□□ -0.5
COPB1-204ENST00000526191 EIF4G2P78344 907 aaKnown RBP eCLIP11.94□□□□□ -0.5
COPB1-204ENST00000526191 TREML4Q6UXN2 200 aa11.94□□□□□ -0.5
COPB1-204ENST00000526191 DNMT3LQ9UJW3 386 aa11.94□□□□□ -0.5
COPB1-204ENST00000526191 PCDHB11Q9Y5F2 797 aa11.94□□□□□ -0.5
COPB1-204ENST00000526191 FLIIQ13045 1269 aa11.93□□□□□ -0.5
COPB1-204ENST00000526191 TTLL8A6PVC2 850 aa11.92□□□□□ -0.5
COPB1-204ENST00000526191 SCTRP47872 440 aa11.92□□□□□ -0.5
COPB1-204ENST00000526191 WASHC4Q2M389 1173 aa11.92□□□□□ -0.5
COPB1-204ENST00000526191 LCE2AQ5TA79 106 aaPredicted RBP11.92□□□□□ -0.5
COPB1-204ENST00000526191 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
COPB1-204ENST00000526191 INSM2Q96T92 566 aaPredicted RBP11.92□□□□□ -0.5
COPB1-204ENST00000526191 FIGNL2A6NMB9 653 aa11.91□□□□□ -0.5
COPB1-204ENST00000526191 WFS1O76024 890 aa11.91□□□□□ -0.5
COPB1-204ENST00000526191 PTGIRP43119 386 aa11.91□□□□□ -0.5
COPB1-204ENST00000526191 CTSOP43234 321 aaPredicted RBP11.91□□□□□ -0.5
COPB1-204ENST00000526191 VEGFBP49765 207 aa11.91□□□□□ -0.5
COPB1-204ENST00000526191 ERVK-9P63128 1117 aa11.91□□□□□ -0.5
COPB1-204ENST00000526191 NXF1Q9UBU9 619 aaKnown RBP11.91□□□□□ -0.5
COPB1-204ENST00000526191 UBTFP17480 764 aaKnown RBP11.9□□□□□ -0.5
COPB1-204ENST00000526191 LCE2CQ5TA81 110 aa11.9□□□□□ -0.5
COPB1-204ENST00000526191 CC2D2BQ6DHV5 1058 aa11.9□□□□□ -0.5
COPB1-204ENST00000526191 CCDC125Q86Z20 511 aa11.9□□□□□ -0.5
COPB1-204ENST00000526191 CDCA7Q9BWT1 371 aaPredicted RBP11.89□□□□□ -0.51
COPB1-204ENST00000526191 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
COPB1-204ENST00000526191 PHTF2Q8N3S3 785 aa11.88□□□□□ -0.51
COPB1-204ENST00000526191 POLMQ9NP87 494 aaPredicted RBP11.88□□□□□ -0.51
COPB1-204ENST00000526191 RAD21O60216 631 aa11.87□□□□□ -0.51
COPB1-204ENST00000526191 OSBPL3Q9H4L5 887 aa11.86□□□□□ -0.51
COPB1-204ENST00000526191 ATP5J2-PTCD1G3V325 749 aa11.85□□□□□ -0.51
COPB1-204ENST00000526191 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.85□□□□□ -0.519e-6■■■■□ 25
COPB1-204ENST00000526191 SLFNL1Q499Z3 407 aa11.85□□□□□ -0.51
COPB1-204ENST00000526191 FOXD4L5Q5VV16 416 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms