RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 KTN1Q86UP2 1357 aaKnown RBP17.35■□□□□ 0.37
COLCA1-202ENST00000526150 CPSF1Q10570 1443 aaKnown RBP17.35■□□□□ 0.37
COLCA1-202ENST00000526150 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
COLCA1-202ENST00000526150 CARD10Q9BWT7 1032 aa17.33■□□□□ 0.36
COLCA1-202ENST00000526150 BCL11BQ9C0K0 894 aaPredicted RBP17.33■□□□□ 0.36
COLCA1-202ENST00000526150 SPON1Q9HCB6 807 aa17.33■□□□□ 0.36
COLCA1-202ENST00000526150 COL18A1P39060 1754 aa17.33■□□□□ 0.36
COLCA1-202ENST00000526150 AKAP12Q02952 1782 aa17.33■□□□□ 0.36
COLCA1-202ENST00000526150 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.36
COLCA1-202ENST00000526150 SBNO2Q9Y2G9 1366 aa17.32■□□□□ 0.36
COLCA1-202ENST00000526150 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
COLCA1-202ENST00000526150 EXOC5O00471 708 aa17.32■□□□□ 0.36
COLCA1-202ENST00000526150 AXIN2Q9Y2T1 843 aa17.32■□□□□ 0.36
COLCA1-202ENST00000526150 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
COLCA1-202ENST00000526150 SOX12O15370 315 aa17.31■□□□□ 0.36
COLCA1-202ENST00000526150 PPP1R1BQ9UD71 204 aaPredicted RBP17.31■□□□□ 0.36
COLCA1-202ENST00000526150 BCL9O00512 1426 aa17.3■□□□□ 0.36
COLCA1-202ENST00000526150 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
COLCA1-202ENST00000526150 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
COLCA1-202ENST00000526150 KCNQ2O43526 872 aa17.3■□□□□ 0.36
COLCA1-202ENST00000526150 HDGFL2Q7Z4V5 671 aaPredicted RBP17.3■□□□□ 0.36
COLCA1-202ENST00000526150 CARD11Q9BXL7 1154 aa17.3■□□□□ 0.36
COLCA1-202ENST00000526150 ABCC6O95255 1503 aa17.3■□□□□ 0.36
COLCA1-202ENST00000526150 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
COLCA1-202ENST00000526150 SBF2Q86WG5 1849 aa17.29■□□□□ 0.36
COLCA1-202ENST00000526150 PEAK1Q9H792 1746 aa17.29■□□□□ 0.36
COLCA1-202ENST00000526150 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
COLCA1-202ENST00000526150 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
COLCA1-202ENST00000526150 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.36
COLCA1-202ENST00000526150 TMC1Q8TDI8 760 aa17.27■□□□□ 0.36
COLCA1-202ENST00000526150 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
COLCA1-202ENST00000526150 USP31Q70CQ4 1352 aa17.27■□□□□ 0.35
COLCA1-202ENST00000526150 WNK3Q9BYP7 1800 aa17.26■□□□□ 0.35
COLCA1-202ENST00000526150 RGPD5Q99666 1765 aa17.26■□□□□ 0.35
COLCA1-202ENST00000526150 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
COLCA1-202ENST00000526150 NFAT5O94916 1531 aa17.25■□□□□ 0.35
COLCA1-202ENST00000526150 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
COLCA1-202ENST00000526150 MON2Q7Z3U7 1717 aa17.24■□□□□ 0.35
COLCA1-202ENST00000526150 NLRP2Q9NX02 1062 aa17.23■□□□□ 0.35
COLCA1-202ENST00000526150 STK32BQ9NY57 414 aa17.23■□□□□ 0.35
COLCA1-202ENST00000526150 NINLQ9Y2I6 1382 aa17.23■□□□□ 0.35
COLCA1-202ENST00000526150 ERBB3P21860 1342 aa17.21■□□□□ 0.35
COLCA1-202ENST00000526150 EDC4Q6P2E9 1401 aaKnown RBP17.21■□□□□ 0.35
COLCA1-202ENST00000526150 IL2RBP14784 551 aa17.21■□□□□ 0.35
COLCA1-202ENST00000526150 TXNRD1Q16881 649 aa17.21■□□□□ 0.35
COLCA1-202ENST00000526150 NME9Q86XW9 330 aa17.21■□□□□ 0.35
COLCA1-202ENST00000526150 TNS2Q63HR2 1409 aa17.21■□□□□ 0.34
COLCA1-202ENST00000526150 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
COLCA1-202ENST00000526150 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
COLCA1-202ENST00000526150 PROM2Q8N271 834 aa17.19■□□□□ 0.34
COLCA1-202ENST00000526150 ANKRD24Q8TF21 1146 aa17.19■□□□□ 0.34
COLCA1-202ENST00000526150 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
COLCA1-202ENST00000526150 YY1P25490 414 aa17.18■□□□□ 0.34
COLCA1-202ENST00000526150 SLC15A2Q16348 729 aa17.18■□□□□ 0.34
COLCA1-202ENST00000526150 PTF1AQ7RTS3 328 aa17.18■□□□□ 0.34
COLCA1-202ENST00000526150 CD163L1Q9NR16 1453 aa17.18■□□□□ 0.34
COLCA1-202ENST00000526150 KAT6BQ8WYB5 2073 aa17.17■□□□□ 0.34
COLCA1-202ENST00000526150 LTN1O94822 1766 aa17.17■□□□□ 0.34
COLCA1-202ENST00000526150 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
COLCA1-202ENST00000526150 IP6K1Q92551 441 aa17.15■□□□□ 0.34
COLCA1-202ENST00000526150 COG3Q96JB2 828 aa17.15■□□□□ 0.34
COLCA1-202ENST00000526150 ACSBG1Q96GR2 724 aa17.14■□□□□ 0.33
COLCA1-202ENST00000526150 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
COLCA1-202ENST00000526150 CASZ1Q86V15 1759 aa17.13■□□□□ 0.33
COLCA1-202ENST00000526150 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
COLCA1-202ENST00000526150 MTFR1LQ9H019 292 aa17.13■□□□□ 0.33
COLCA1-202ENST00000526150 ST20-MTHFSA0A0A6YYL1 179 aa17.11■□□□□ 0.33
COLCA1-202ENST00000526150 AMPHP49418 695 aa17.11■□□□□ 0.33
COLCA1-202ENST00000526150 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
COLCA1-202ENST00000526150 FAM208AQ9UK61 1670 aaKnown RBP17.1■□□□□ 0.33
COLCA1-202ENST00000526150 PTGER2P43116 358 aa17.09■□□□□ 0.33
COLCA1-202ENST00000526150 DDX54Q8TDD1 881 aaKnown RBP17.09■□□□□ 0.33
COLCA1-202ENST00000526150 LTV1Q96GA3 475 aaPredicted RBP17.09■□□□□ 0.33
COLCA1-202ENST00000526150 TESK2Q96S53 571 aa17.09■□□□□ 0.33
COLCA1-202ENST00000526150 TMF1P82094 1093 aa17.08■□□□□ 0.32
COLCA1-202ENST00000526150 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.32
COLCA1-202ENST00000526150 PDGFDQ9GZP0 370 aaPredicted RBP17.08■□□□□ 0.32
COLCA1-202ENST00000526150 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
COLCA1-202ENST00000526150 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
COLCA1-202ENST00000526150 BTAF1O14981 1849 aa17.07■□□□□ 0.32
COLCA1-202ENST00000526150 ANKRD36BQ8N2N9 1353 aa17.06■□□□□ 0.32
COLCA1-202ENST00000526150 MAP3K19Q56UN5 1328 aa17.06■□□□□ 0.32
COLCA1-202ENST00000526150 HOXC9P31274 260 aa17.06■□□□□ 0.32
COLCA1-202ENST00000526150 SLC16A10Q8TF71 515 aa17.06■□□□□ 0.32
COLCA1-202ENST00000526150 ZCRB1Q8TBF4 217 aaKnown RBP17.05■□□□□ 0.32
COLCA1-202ENST00000526150 SYT17Q9BSW7 474 aa17.05■□□□□ 0.32
COLCA1-202ENST00000526150 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
COLCA1-202ENST00000526150 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
COLCA1-202ENST00000526150 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
COLCA1-202ENST00000526150 ARXQ96QS3 562 aa17.04■□□□□ 0.32
COLCA1-202ENST00000526150 FHDC1Q9C0D6 1143 aaPredicted RBP17.04■□□□□ 0.32
COLCA1-202ENST00000526150 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
COLCA1-202ENST00000526150 MYOM1P52179 1685 aa17.03■□□□□ 0.32
COLCA1-202ENST00000526150 POLD1P28340 1107 aa17.02■□□□□ 0.32
COLCA1-202ENST00000526150 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
COLCA1-202ENST00000526150 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
COLCA1-202ENST00000526150 LRRC4BQ9NT99 713 aa17.01■□□□□ 0.31
COLCA1-202ENST00000526150 PAPPAQ13219 1627 aa17■□□□□ 0.31
COLCA1-202ENST00000526150 FYB1O15117 783 aa17■□□□□ 0.31
COLCA1-202ENST00000526150 PRIM1P49642 420 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms