RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 TSC1Q92574 1164 aa5.64□□□□□ -1.51
TRAPPC4-207ENST00000526141 GPKOWQ92917 476 aaPredicted RBP eCLIP5.64□□□□□ -1.51
TRAPPC4-207ENST00000526141 DNMT3AQ9Y6K1 912 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC4-207ENST00000526141 NUTM2BA6NNL0 878 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC4-207ENST00000526141 NUTM2EB1AL46 878 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC4-207ENST00000526141 PER1O15534 1290 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC4-207ENST00000526141 ZMYND10O75800 440 aa5.63□□□□□ -1.51
TRAPPC4-207ENST00000526141 MARSP56192 900 aaKnown RBP5.63□□□□□ -1.51
TRAPPC4-207ENST00000526141 NUTM2DQ5VT03 806 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC4-207ENST00000526141 ZNF385CQ66K41 422 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC4-207ENST00000526141 NUTM2AQ8IVF1 878 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC4-207ENST00000526141 CCDC155Q8N6L0 562 aa5.63□□□□□ -1.51
TRAPPC4-207ENST00000526141 MAGEB6P1A0A0J9YX57 407 aa5.62□□□□□ -1.51
TRAPPC4-207ENST00000526141 FIGNL2A6NMB9 653 aa5.62□□□□□ -1.51
TRAPPC4-207ENST00000526141 SPINT1O43278 529 aa5.62□□□□□ -1.51
TRAPPC4-207ENST00000526141 SLURP2P0DP57 97 aa5.62□□□□□ -1.51
TRAPPC4-207ENST00000526141 Q6ZVU0 165 aa5.62□□□□□ -1.51
TRAPPC4-207ENST00000526141 SV2AQ7L0J3 742 aa5.62□□□□□ -1.51
TRAPPC4-207ENST00000526141 SH3BP5LQ7L8J4 393 aa5.62□□□□□ -1.51
TRAPPC4-207ENST00000526141 HELBQ8NG08 1087 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC4-207ENST00000526141 SCARF2Q96GP6 870 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC4-207ENST00000526141 SLC35F4A4IF30 521 aa5.61□□□□□ -1.51
TRAPPC4-207ENST00000526141 ITGA6P23229 1130 aa5.61□□□□□ -1.51
TRAPPC4-207ENST00000526141 IRS1P35568 1242 aa5.61□□□□□ -1.51
TRAPPC4-207ENST00000526141 DHX9Q08211 1270 aaKnown RBP5.61□□□□□ -1.51
TRAPPC4-207ENST00000526141 CSPP1Q1MSJ5 1256 aa5.61□□□□□ -1.51
TRAPPC4-207ENST00000526141 TUSC1Q2TAM9 212 aa5.61□□□□□ -1.51
TRAPPC4-207ENST00000526141 GPAT2Q6NUI2 795 aa5.61□□□□□ -1.51
TRAPPC4-207ENST00000526141 CABLES1Q8TDN4 633 aa5.61□□□□□ -1.51
TRAPPC4-207ENST00000526141 CDV3Q9UKY7 258 aaKnown RBP5.61□□□□□ -1.51
TRAPPC4-207ENST00000526141 ARHGEF15O94989 841 aa5.6□□□□□ -1.51
TRAPPC4-207ENST00000526141 PPP1R26Q5T8A7 1209 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC4-207ENST00000526141 C14orf37Q86TY3 774 aa5.6□□□□□ -1.51
TRAPPC4-207ENST00000526141 VWA5B2Q8N398 1253 aa5.6□□□□□ -1.51
TRAPPC4-207ENST00000526141 CDC14CA4D256 554 aa5.59□□□□□ -1.51
TRAPPC4-207ENST00000526141 RNFT1Q5M7Z0 435 aa5.59□□□□□ -1.51
TRAPPC4-207ENST00000526141 PARP9Q8IXQ6 854 aa5.59□□□□□ -1.51
TRAPPC4-207ENST00000526141 CARD14Q9BXL6 1004 aa5.59□□□□□ -1.51
TRAPPC4-207ENST00000526141 ENAMQ9NRM1 1142 aa5.59□□□□□ -1.51
TRAPPC4-207ENST00000526141 LILRB3O75022 631 aa5.58□□□□□ -1.52
TRAPPC4-207ENST00000526141 MAP3K10Q02779 954 aa5.58□□□□□ -1.52
TRAPPC4-207ENST00000526141 CBLBQ13191 982 aa5.58□□□□□ -1.52
TRAPPC4-207ENST00000526141 ERFEQ4G0M1 354 aa5.58□□□□□ -1.52
TRAPPC4-207ENST00000526141 WHAMMQ8TF30 809 aa5.58□□□□□ -1.52
TRAPPC4-207ENST00000526141 PDXDC2PQ6P474 469 aa5.57□□□□□ -1.52
TRAPPC4-207ENST00000526141 ZC3H15Q8WU90 426 aaKnown RBP5.57□□□□□ -1.52
TRAPPC4-207ENST00000526141 SLC10A4Q96EP9 437 aa5.57□□□□□ -1.52
TRAPPC4-207ENST00000526141 KCTD15Q96SI1 283 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC4-207ENST00000526141 ARHGAP9Q9BRR9 750 aa5.57□□□□□ -1.52
TRAPPC4-207ENST00000526141 TRIM66O15016 1216 aa5.56□□□□□ -1.52
TRAPPC4-207ENST00000526141 RANGAP1P46060 587 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC4-207ENST00000526141 SRSF11Q05519 484 aaKnown RBP5.56□□□□□ -1.52
TRAPPC4-207ENST00000526141 QPCTQ16769 361 aa5.56□□□□□ -1.52
TRAPPC4-207ENST00000526141 MYSM1Q5VVJ2 828 aa5.56□□□□□ -1.52
TRAPPC4-207ENST00000526141 POLMQ9NP87 494 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC4-207ENST00000526141 LIMD1Q9UGP4 676 aa5.56□□□□□ -1.52
TRAPPC4-207ENST00000526141 ADAMTS2O95450 1211 aa5.55□□□□□ -1.52
TRAPPC4-207ENST00000526141 RELBQ01201 579 aa5.55□□□□□ -1.52
TRAPPC4-207ENST00000526141 ZBTB33Q86T24 672 aa5.55□□□□□ -1.52
TRAPPC4-207ENST00000526141 TRIM52Q96A61 297 aa5.55□□□□□ -1.52
TRAPPC4-207ENST00000526141 AK7Q96M32 723 aa5.55□□□□□ -1.52
TRAPPC4-207ENST00000526141 PHF20L1A8MW92 1017 aa5.54□□□□□ -1.52
TRAPPC4-207ENST00000526141 CTSOP43234 321 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC4-207ENST00000526141 INSM2Q96T92 566 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC4-207ENST00000526141 RSPH6AQ9H0K4 717 aa5.54□□□□□ -1.52
TRAPPC4-207ENST00000526141 ZC3H4Q9UPT8 1303 aaKnown RBP5.53□□□□□ -1.52
TRAPPC4-207ENST00000526141 MSTNO14793 375 aa5.53□□□□□ -1.52
TRAPPC4-207ENST00000526141 RTL5Q5HYW3 569 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC4-207ENST00000526141 LYPD4Q6UWN0 246 aa5.53□□□□□ -1.52
TRAPPC4-207ENST00000526141 RNF217Q8TC41 542 aa5.53□□□□□ -1.52
TRAPPC4-207ENST00000526141 GMCL1Q96IK5 515 aa5.53□□□□□ -1.52
TRAPPC4-207ENST00000526141 AGBL1Q96MI9 1066 aa5.53□□□□□ -1.52
TRAPPC4-207ENST00000526141 FKBPLQ9UIM3 349 aa5.53□□□□□ -1.52
TRAPPC4-207ENST00000526141 CELA2BP08218 269 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC4-207ENST00000526141 CLK2P49760 499 aaKnown RBP5.52□□□□□ -1.53
TRAPPC4-207ENST00000526141 PTK2Q05397 1052 aa5.52□□□□□ -1.53
TRAPPC4-207ENST00000526141 NBPF20Q3BBV1 942 aa5.52□□□□□ -1.53
TRAPPC4-207ENST00000526141 INTS6LQ5JSJ4 861 aaKnown RBP5.52□□□□□ -1.53
TRAPPC4-207ENST00000526141 FOXR1Q6PIV2 292 aa5.52□□□□□ -1.53
TRAPPC4-207ENST00000526141 PODNQ7Z5L7 613 aa5.52□□□□□ -1.53
TRAPPC4-207ENST00000526141 BEND7Q8N7W2 519 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC4-207ENST00000526141 SENP3-EIF4A1A0A087X0R7 540 aa5.51□□□□□ -1.53
TRAPPC4-207ENST00000526141 LYSMD3Q7Z3D4 306 aa5.51□□□□□ -1.53
TRAPPC4-207ENST00000526141 ZNF395Q9H8N7 513 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC4-207ENST00000526141 GPSM3Q9Y4H4 160 aa5.51□□□□□ -1.53
TRAPPC4-207ENST00000526141 ADH1AP07327 375 aa5.5□□□□□ -1.53
TRAPPC4-207ENST00000526141 CTDSPL2Q05D32 466 aa5.5□□□□□ -1.53
TRAPPC4-207ENST00000526141 PNMA1Q8ND90 353 aa5.5□□□□□ -1.53
TRAPPC4-207ENST00000526141 MBIPQ9NS73 344 aa5.5□□□□□ -1.53
TRAPPC4-207ENST00000526141 ADAM23O75077 832 aa5.49□□□□□ -1.53
TRAPPC4-207ENST00000526141 PTGIRP43119 386 aa5.49□□□□□ -1.53
TRAPPC4-207ENST00000526141 PDE4DQ08499 809 aa5.49□□□□□ -1.53
TRAPPC4-207ENST00000526141 PLA2G4EQ3MJ16 856 aa5.49□□□□□ -1.53
TRAPPC4-207ENST00000526141 DCAF5Q96JK2 942 aa5.49□□□□□ -1.53
TRAPPC4-207ENST00000526141 GAS6Q14393 721 aa5.48□□□□□ -1.53
TRAPPC4-207ENST00000526141 ZNF784Q8NCA9 323 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC4-207ENST00000526141 NEDD1Q8NHV4 660 aa5.48□□□□□ -1.53
TRAPPC4-207ENST00000526141 SPOCK3Q9BQ16 436 aa5.48□□□□□ -1.53
TRAPPC4-207ENST00000526141 LRRC4BQ9NT99 713 aa5.48□□□□□ -1.53
TRAPPC4-207ENST00000526141 PODXL2Q9NZ53 605 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms