RNA–Protein interactions for RNA: ENST00000526067.1

ARHGEF12-205, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-205ENST00000526067 ALS2Q96Q42 1657 aa12.36□□□□□ -0.43
ARHGEF12-205ENST00000526067 PDE3BQ13370 1112 aa12.36□□□□□ -0.43
ARHGEF12-205ENST00000526067 SAFB2Q14151 953 aaKnown RBP eCLIP12.36□□□□□ -0.43
ARHGEF12-205ENST00000526067 POGKQ9P215 609 aa12.36□□□□□ -0.43
ARHGEF12-205ENST00000526067 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
ARHGEF12-205ENST00000526067 IFT172Q9UG01 1749 aa12.35□□□□□ -0.43
ARHGEF12-205ENST00000526067 TRIM26Q12899 539 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF12-205ENST00000526067 POTEGQ6S5H5 508 aa12.35□□□□□ -0.43
ARHGEF12-205ENST00000526067 KIAA0232Q92628 1395 aa12.34□□□□□ -0.43
ARHGEF12-205ENST00000526067 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
ARHGEF12-205ENST00000526067 TCP11L2Q8N4U5 519 aa12.34□□□□□ -0.43
ARHGEF12-205ENST00000526067 PROM2Q8N271 834 aa12.33□□□□□ -0.44
ARHGEF12-205ENST00000526067 ZNF784Q8NCA9 323 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF12-205ENST00000526067 NGDNQ8NEJ9 315 aaKnown RBP12.33□□□□□ -0.44
ARHGEF12-205ENST00000526067 SLC39A7Q92504 469 aa12.33□□□□□ -0.44
ARHGEF12-205ENST00000526067 ADGRB2O60241 1585 aa12.32□□□□□ -0.44
ARHGEF12-205ENST00000526067 EIF3AQ14152 1382 aaKnown RBP12.32□□□□□ -0.44
ARHGEF12-205ENST00000526067 C7P10643 843 aa12.32□□□□□ -0.44
ARHGEF12-205ENST00000526067 HIRIP3Q9BW71 556 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF12-205ENST00000526067 STRN4Q9NRL3 753 aa12.32□□□□□ -0.44
ARHGEF12-205ENST00000526067 PPP1R1BQ9UD71 204 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF12-205ENST00000526067 EVA1CP58658 441 aa12.31□□□□□ -0.44
ARHGEF12-205ENST00000526067 ZC3H6P61129 1189 aaKnown RBP12.31□□□□□ -0.44
ARHGEF12-205ENST00000526067 LARP1Q6PKG0 1096 aaKnown RBP12.31□□□□□ -0.44
ARHGEF12-205ENST00000526067 RREB1Q92766 1687 aa12.31□□□□□ -0.44
ARHGEF12-205ENST00000526067 CPDO75976 1380 aa12.3□□□□□ -0.44
ARHGEF12-205ENST00000526067 CRYBG1Q9Y4K1 1723 aa12.3□□□□□ -0.44
ARHGEF12-205ENST00000526067 PTGER2P43116 358 aa12.3□□□□□ -0.44
ARHGEF12-205ENST00000526067 NUDT16Q96DE0 195 aaKnown RBP12.3□□□□□ -0.44
ARHGEF12-205ENST00000526067 STAC3Q96MF2 364 aa12.3□□□□□ -0.44
ARHGEF12-205ENST00000526067 TRAK1Q9UPV9 953 aa12.3□□□□□ -0.44
ARHGEF12-205ENST00000526067 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
ARHGEF12-205ENST00000526067 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
ARHGEF12-205ENST00000526067 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
ARHGEF12-205ENST00000526067 USP35Q9P2H5 1018 aa12.29□□□□□ -0.44
ARHGEF12-205ENST00000526067 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF12-205ENST00000526067 TULP4Q9NRJ4 1543 aa12.29□□□□□ -0.44
ARHGEF12-205ENST00000526067 ADGRB1O14514 1584 aa12.28□□□□□ -0.44
ARHGEF12-205ENST00000526067 UTRNP46939 3433 aa12.28□□□□□ -0.44
ARHGEF12-205ENST00000526067 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF12-205ENST00000526067 POLR3AO14802 1390 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF12-205ENST00000526067 CAMTA1Q9Y6Y1 1673 aa12.28□□□□□ -0.44
ARHGEF12-205ENST00000526067 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
ARHGEF12-205ENST00000526067 ATN1P54259 1190 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF12-205ENST00000526067 LCE2DQ5TA82 110 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF12-205ENST00000526067 IFFO2Q5TF58 517 aa12.27□□□□□ -0.45
ARHGEF12-205ENST00000526067 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF12-205ENST00000526067 BCL9O00512 1426 aa12.26□□□□□ -0.45
ARHGEF12-205ENST00000526067 USP19O94966 1318 aa12.26□□□□□ -0.45
ARHGEF12-205ENST00000526067 C1QTNF8P60827 252 aa12.26□□□□□ -0.45
ARHGEF12-205ENST00000526067 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
ARHGEF12-205ENST00000526067 SYT17Q9BSW7 474 aa12.26□□□□□ -0.45
ARHGEF12-205ENST00000526067 PDGFDQ9GZP0 370 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF12-205ENST00000526067 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF12-205ENST00000526067 GCP02774 474 aa12.25□□□□□ -0.45
ARHGEF12-205ENST00000526067 ATP7BP35670 1465 aa12.24□□□□□ -0.45
ARHGEF12-205ENST00000526067 ACEP12821 1306 aa12.24□□□□□ -0.45
ARHGEF12-205ENST00000526067 POTEFA5A3E0 1075 aa12.24□□□□□ -0.45
ARHGEF12-205ENST00000526067 NUTM2GQ5VZR2 741 aa12.24□□□□□ -0.45
ARHGEF12-205ENST00000526067 PTF1AQ7RTS3 328 aa12.24□□□□□ -0.45
ARHGEF12-205ENST00000526067 KIF12Q96FN5 646 aa12.24□□□□□ -0.45
ARHGEF12-205ENST00000526067 CDK19Q9BWU1 502 aa12.24□□□□□ -0.45
ARHGEF12-205ENST00000526067 NLRP13Q86W25 1043 aa12.23□□□□□ -0.45
ARHGEF12-205ENST00000526067 ABTB2Q8N961 1025 aa12.23□□□□□ -0.45
ARHGEF12-205ENST00000526067 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
ARHGEF12-205ENST00000526067 OVOS2A0A0J9YW53 1432 aa12.22□□□□□ -0.45
ARHGEF12-205ENST00000526067 OVOS2Q6IE36 1432 aa12.22□□□□□ -0.45
ARHGEF12-205ENST00000526067 ZBTB7AO95365 584 aa12.21□□□□□ -0.45
ARHGEF12-205ENST00000526067 SLC15A2Q16348 729 aa12.21□□□□□ -0.45
ARHGEF12-205ENST00000526067 MARCH10Q8NA82 808 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF12-205ENST00000526067 FHDC1Q9C0D6 1143 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF12-205ENST00000526067 TRPC6Q9Y210 931 aa12.21□□□□□ -0.45
ARHGEF12-205ENST00000526067 LMO7Q8WWI1 1683 aa12.21□□□□□ -0.45
ARHGEF12-205ENST00000526067 DDB1Q16531 1140 aa12.2□□□□□ -0.46
ARHGEF12-205ENST00000526067 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
ARHGEF12-205ENST00000526067 MTFR1LQ9H019 292 aa12.2□□□□□ -0.46
ARHGEF12-205ENST00000526067 CRB1P82279 1406 aa12.2□□□□□ -0.46
ARHGEF12-205ENST00000526067 PEAK1Q9H792 1746 aa12.2□□□□□ -0.46
ARHGEF12-205ENST00000526067 BRD4O60885 1362 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF12-205ENST00000526067 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
ARHGEF12-205ENST00000526067 COL5A2P05997 1499 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 RGPD3A6NKT7 1758 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 RGPD4Q7Z3J3 1758 aa12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 SENP3-EIF4A1A0A087X0R7 540 aa12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 TXNRD1Q16881 649 aa12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 PARP4Q9UKK3 1724 aaKnown RBP12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
ARHGEF12-205ENST00000526067 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF12-205ENST00000526067 STK32BQ9NY57 414 aa12.17□□□□□ -0.46
ARHGEF12-205ENST00000526067 PCDH10Q9P2E7 1040 aa12.17□□□□□ -0.46
ARHGEF12-205ENST00000526067 KDM2AQ9Y2K7 1162 aa12.17□□□□□ -0.46
ARHGEF12-205ENST00000526067 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
ARHGEF12-205ENST00000526067 SBF2Q86WG5 1849 aa12.15□□□□□ -0.46
ARHGEF12-205ENST00000526067 NRKQ7Z2Y5 1582 aa12.15□□□□□ -0.46
ARHGEF12-205ENST00000526067 PRKCSHP14314 528 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF12-205ENST00000526067 ARXQ96QS3 562 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms