RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 PCGF6Q9BYE7 350 aa16.34■□□□□ 0.21
HIF3A-209ENST00000525854 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
HIF3A-209ENST00000525854 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
HIF3A-209ENST00000525854 MON2Q7Z3U7 1717 aa16.33■□□□□ 0.21
HIF3A-209ENST00000525854 C11orf95C9JLR9 678 aaPredicted RBP16.33■□□□□ 0.2
HIF3A-209ENST00000525854 A0A1W2PP64 1363 aa16.32■□□□□ 0.2
HIF3A-209ENST00000525854 DISP2A7MBM2 1401 aa16.32■□□□□ 0.2
HIF3A-209ENST00000525854 TRIM37O94972 964 aa16.32■□□□□ 0.2
HIF3A-209ENST00000525854 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
HIF3A-209ENST00000525854 TMF1P82094 1093 aa16.32■□□□□ 0.2
HIF3A-209ENST00000525854 USP47Q96K76 1375 aa16.32■□□□□ 0.2
HIF3A-209ENST00000525854 CDCA7Q9BWT1 371 aaPredicted RBP16.32■□□□□ 0.2
HIF3A-209ENST00000525854 NFAT5O94916 1531 aa16.31■□□□□ 0.2
HIF3A-209ENST00000525854 EN1Q05925 392 aaPredicted RBP16.31■□□□□ 0.2
HIF3A-209ENST00000525854 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
HIF3A-209ENST00000525854 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
HIF3A-209ENST00000525854 ABCC6O95255 1503 aa16.3■□□□□ 0.2
HIF3A-209ENST00000525854 COL18A1P39060 1754 aa16.3■□□□□ 0.2
HIF3A-209ENST00000525854 DDB1Q16531 1140 aa16.29■□□□□ 0.2
HIF3A-209ENST00000525854 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
HIF3A-209ENST00000525854 APBA3O96018 575 aa16.28■□□□□ 0.2
HIF3A-209ENST00000525854 PARD3Q8TEW0 1356 aa16.27■□□□□ 0.2
HIF3A-209ENST00000525854 PARP4Q9UKK3 1724 aaKnown RBP16.27■□□□□ 0.19
HIF3A-209ENST00000525854 USP54Q70EL1 1684 aa16.27■□□□□ 0.19
HIF3A-209ENST00000525854 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
HIF3A-209ENST00000525854 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
HIF3A-209ENST00000525854 COG3Q96JB2 828 aa16.26■□□□□ 0.19
HIF3A-209ENST00000525854 OVOS2A0A0G2JMS6 1433 aa16.26■□□□□ 0.19
HIF3A-209ENST00000525854 OVOS2A0A0J9YW53 1432 aa16.26■□□□□ 0.19
HIF3A-209ENST00000525854 OVOS2Q6IE36 1432 aa16.26■□□□□ 0.19
HIF3A-209ENST00000525854 EZH2Q15910 746 aaKnown RBP16.25■□□□□ 0.19
HIF3A-209ENST00000525854 CAMKK2Q96RR4 588 aa16.25■□□□□ 0.19
HIF3A-209ENST00000525854 ERBB3P21860 1342 aa16.24■□□□□ 0.19
HIF3A-209ENST00000525854 NLRP2Q9NX02 1062 aa16.24■□□□□ 0.19
HIF3A-209ENST00000525854 TNS1Q9HBL0 1735 aaKnown RBP16.24■□□□□ 0.19
HIF3A-209ENST00000525854 EXOC5O00471 708 aa16.23■□□□□ 0.19
HIF3A-209ENST00000525854 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-209ENST00000525854 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-209ENST00000525854 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
HIF3A-209ENST00000525854 LRRC37A3O60309 1634 aa16.21■□□□□ 0.19
HIF3A-209ENST00000525854 IP6K1Q92551 441 aa16.21■□□□□ 0.19
HIF3A-209ENST00000525854 BCL9O00512 1426 aa16.2■□□□□ 0.18
HIF3A-209ENST00000525854 MARCH10Q8NA82 808 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-209ENST00000525854 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-209ENST00000525854 RGPD5Q99666 1765 aa16.2■□□□□ 0.18
HIF3A-209ENST00000525854 IL2RBP14784 551 aa16.19■□□□□ 0.18
HIF3A-209ENST00000525854 R3HDM1Q15032 1099 aaKnown RBP16.19■□□□□ 0.18
HIF3A-209ENST00000525854 SRCAPQ6ZRS2 3230 aa16.19■□□□□ 0.18
HIF3A-209ENST00000525854 FYB1O15117 783 aa16.18■□□□□ 0.18
HIF3A-209ENST00000525854 AMPHP49418 695 aa16.18■□□□□ 0.18
HIF3A-209ENST00000525854 NBPF14Q5TI25 921 aa16.18■□□□□ 0.18
HIF3A-209ENST00000525854 PEAK1Q9H792 1746 aa16.18■□□□□ 0.18
HIF3A-209ENST00000525854 TNS2Q63HR2 1409 aa16.18■□□□□ 0.18
HIF3A-209ENST00000525854 LTN1O94822 1766 aa16.18■□□□□ 0.18
HIF3A-209ENST00000525854 MAP3K19Q56UN5 1328 aa16.18■□□□□ 0.18
HIF3A-209ENST00000525854 PLSCR1O15162 318 aa16.17■□□□□ 0.18
HIF3A-209ENST00000525854 WNK3Q9BYP7 1800 aa16.17■□□□□ 0.18
HIF3A-209ENST00000525854 LTV1Q96GA3 475 aaPredicted RBP16.16■□□□□ 0.18
HIF3A-209ENST00000525854 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
HIF3A-209ENST00000525854 HOXC9P31274 260 aa16.15■□□□□ 0.18
HIF3A-209ENST00000525854 RTL1A6NKG5 1358 aa16.14■□□□□ 0.17
HIF3A-209ENST00000525854 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
HIF3A-209ENST00000525854 FBLN1P23142 703 aa16.13■□□□□ 0.17
HIF3A-209ENST00000525854 LRP5O75197 1615 aa16.12■□□□□ 0.17
HIF3A-209ENST00000525854 RRS1Q15050 365 aaKnown RBP16.12■□□□□ 0.17
HIF3A-209ENST00000525854 CARD14Q9BXL6 1004 aa16.12■□□□□ 0.17
HIF3A-209ENST00000525854 RREB1Q92766 1687 aa16.11■□□□□ 0.17
HIF3A-209ENST00000525854 PTF1AQ7RTS3 328 aa16.11■□□□□ 0.17
HIF3A-209ENST00000525854 NSD3Q9BZ95 1437 aa16.11■□□□□ 0.17
HIF3A-209ENST00000525854 SBF2Q86WG5 1849 aa16.1■□□□□ 0.17
HIF3A-209ENST00000525854 FAM208AQ9UK61 1670 aaKnown RBP16.1■□□□□ 0.17
HIF3A-209ENST00000525854 CGNL1Q0VF96 1302 aa16.1■□□□□ 0.17
HIF3A-209ENST00000525854 KIF24Q5T7B8 1368 aa16.1■□□□□ 0.17
HIF3A-209ENST00000525854 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
HIF3A-209ENST00000525854 RGPD3A6NKT7 1758 aaPredicted RBP16.09■□□□□ 0.17
HIF3A-209ENST00000525854 RGPD4Q7Z3J3 1758 aa16.09■□□□□ 0.17
HIF3A-209ENST00000525854 POLR3GLQ9BT43 218 aa16.09■□□□□ 0.17
HIF3A-209ENST00000525854 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.17
HIF3A-209ENST00000525854 KCNQ2O43526 872 aa16.08■□□□□ 0.16
HIF3A-209ENST00000525854 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
HIF3A-209ENST00000525854 FLT4P35916 1363 aa16.08■□□□□ 0.16
HIF3A-209ENST00000525854 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
HIF3A-209ENST00000525854 ACSBG1Q96GR2 724 aa16.07■□□□□ 0.16
HIF3A-209ENST00000525854 INSRP06213 1382 aa16.07■□□□□ 0.16
HIF3A-209ENST00000525854 MYOM1P52179 1685 aa16.07■□□□□ 0.16
HIF3A-209ENST00000525854 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
HIF3A-209ENST00000525854 PROM2Q8N271 834 aa16.06■□□□□ 0.16
HIF3A-209ENST00000525854 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
HIF3A-209ENST00000525854 HSP90AB2PQ58FF8 381 aa16.05■□□□□ 0.16
HIF3A-209ENST00000525854 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
HIF3A-209ENST00000525854 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
HIF3A-209ENST00000525854 RAPGEF4Q8WZA2 1011 aa16.05■□□□□ 0.16
HIF3A-209ENST00000525854 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
HIF3A-209ENST00000525854 NHSQ6T4R5 1651 aa16.03■□□□□ 0.16
HIF3A-209ENST00000525854 SPON1Q9HCB6 807 aa16.03■□□□□ 0.16
HIF3A-209ENST00000525854 ANO8Q9HCE9 1232 aaPredicted RBP16.03■□□□□ 0.16
HIF3A-209ENST00000525854 STK32BQ9NY57 414 aa16.03■□□□□ 0.16
HIF3A-209ENST00000525854 PPM1GO15355 546 aaPredicted RBP16.02■□□□□ 0.16
HIF3A-209ENST00000525854 TATP17735 454 aaPredicted RBP16.02■□□□□ 0.16
HIF3A-209ENST00000525854 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms