RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 PCMTD1Q96MG8 357 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-218ENST00000525745 HMX1Q9NP08 348 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-218ENST00000525745 MAN1A2O60476 641 aa6.17□□□□□ -1.42
ECHDC1-218ENST00000525745 RFC5P40937 340 aa6.17□□□□□ -1.42
ECHDC1-218ENST00000525745 PTK2Q05397 1052 aa6.17□□□□□ -1.42
ECHDC1-218ENST00000525745 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
ECHDC1-218ENST00000525745 LINC00528Q8N1L1 170 aa6.17□□□□□ -1.42
ECHDC1-218ENST00000525745 MEIOBQ8N635 442 aa6.17□□□□□ -1.42
ECHDC1-218ENST00000525745 EMILIN1Q9Y6C2 1016 aa6.17□□□□□ -1.42
ECHDC1-218ENST00000525745 ZC3H4Q9UPT8 1303 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-218ENST00000525745 PNMA1Q8ND90 353 aa6.16□□□□□ -1.42
ECHDC1-218ENST00000525745 KCTD15Q96SI1 283 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-218ENST00000525745 WIPF1O43516 503 aa6.15□□□□□ -1.42
ECHDC1-218ENST00000525745 PPP1R26Q5T8A7 1209 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-218ENST00000525745 ADAM32Q8TC27 787 aa6.15□□□□□ -1.42
ECHDC1-218ENST00000525745 PGPEP1Q9NXJ5 209 aa6.15□□□□□ -1.42
ECHDC1-218ENST00000525745 CDV3Q9UKY7 258 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-218ENST00000525745 RAB15P59190 212 aa6.14□□□□□ -1.43
ECHDC1-218ENST00000525745 INSM1Q01101 510 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-218ENST00000525745 NPAS3Q8IXF0 933 aa6.14□□□□□ -1.43
ECHDC1-218ENST00000525745 IRF7Q92985 503 aa6.14□□□□□ -1.43
ECHDC1-218ENST00000525745 OCSTAMPQ9BR26 566 aa6.14□□□□□ -1.43
ECHDC1-218ENST00000525745 GOPCQ9HD26 462 aa6.14□□□□□ -1.43
ECHDC1-218ENST00000525745 GPSM3Q9Y4H4 160 aa6.14□□□□□ -1.43
ECHDC1-218ENST00000525745 H3BM21 787 aa6.13□□□□□ -1.43
ECHDC1-218ENST00000525745 BRPF1P55201 1214 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-218ENST00000525745 CBLBQ13191 982 aa6.13□□□□□ -1.43
ECHDC1-218ENST00000525745 INTS6LQ5JSJ4 861 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-218ENST00000525745 TSEN34Q9BSV6 310 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-218ENST00000525745 GMPRP36959 345 aa6.12□□□□□ -1.43
ECHDC1-218ENST00000525745 DHX9Q08211 1270 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-218ENST00000525745 ERBB4Q15303 1308 aa6.12□□□□□ -1.43
ECHDC1-218ENST00000525745 NBPF20Q3BBV1 942 aa6.12□□□□□ -1.43
ECHDC1-218ENST00000525745 TMEM259Q4ZIN3 620 aa6.12□□□□□ -1.43
ECHDC1-218ENST00000525745 DZIP3Q86Y13 1208 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-218ENST00000525745 TPRNQ4KMQ1 711 aa6.11□□□□□ -1.43
ECHDC1-218ENST00000525745 TRIM34Q9BYJ4 488 aa6.11□□□□□ -1.43
ECHDC1-218ENST00000525745 DNMT3LQ9UJW3 386 aa6.11□□□□□ -1.43
ECHDC1-218ENST00000525745 SOS2Q07890 1332 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-218ENST00000525745 TTLL8A6PVC2 850 aa6.1□□□□□ -1.43
ECHDC1-218ENST00000525745 STK17AQ9UEE5 414 aa6.1□□□□□ -1.43
ECHDC1-218ENST00000525745 FIGNL2A6NMB9 653 aa6.09□□□□□ -1.43
ECHDC1-218ENST00000525745 RELBQ01201 579 aa6.09□□□□□ -1.43
ECHDC1-218ENST00000525745 Q6ZVU0 165 aa6.09□□□□□ -1.43
ECHDC1-218ENST00000525745 AGBL1Q96MI9 1066 aa6.09□□□□□ -1.43
ECHDC1-218ENST00000525745 TMPRSS4Q9NRS4 437 aa6.09□□□□□ -1.43
ECHDC1-218ENST00000525745 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.08□□□□□ -1.447e-7■□□□□ 8.4
ECHDC1-218ENST00000525745 ZNF784Q8NCA9 323 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-218ENST00000525745 ZBBXA8MT70 800 aa6.07□□□□□ -1.44
ECHDC1-218ENST00000525745 SPINT1O43278 529 aa6.07□□□□□ -1.44
ECHDC1-218ENST00000525745 PPFIA3O75145 1194 aa6.07□□□□□ -1.44
ECHDC1-218ENST00000525745 ZNF395Q9H8N7 513 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-218ENST00000525745 PCDHB9Q9Y5E1 797 aa6.07□□□□□ -1.44
ECHDC1-218ENST00000525745 ERVH48-1M5A8F1 160 aa6.06□□□□□ -1.44
ECHDC1-218ENST00000525745 FBXO45P0C2W1 286 aa6.06□□□□□ -1.44
ECHDC1-218ENST00000525745 GJD4Q96KN9 370 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-218ENST00000525745 INSM2Q96T92 566 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-218ENST00000525745 POLMQ9NP87 494 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-218ENST00000525745 CTSOP43234 321 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-218ENST00000525745 PTSQ03393 145 aa6.05□□□□□ -1.44
ECHDC1-218ENST00000525745 ZSCAN1Q8NBB4 408 aa6.05□□□□□ -1.44
ECHDC1-218ENST00000525745 CYLDQ9NQC7 956 aa6.05□□□□□ -1.44
ECHDC1-218ENST00000525745 FAM181BA6NEQ2 426 aa6.04□□□□□ -1.44
ECHDC1-218ENST00000525745 ESPNB1AK53 854 aa6.04□□□□□ -1.44
ECHDC1-218ENST00000525745 ADH1AP07327 375 aa6.04□□□□□ -1.44
ECHDC1-218ENST00000525745 VSIG8P0DPA2 414 aa6.04□□□□□ -1.44
ECHDC1-218ENST00000525745 LILRA1O75019 489 aa6.03□□□□□ -1.44
ECHDC1-218ENST00000525745 GIGYF1O75420 1035 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-218ENST00000525745 ADD1P35611 737 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-218ENST00000525745 SEPT12Q8IYM1 358 aa6.03□□□□□ -1.44
ECHDC1-218ENST00000525745 MTMR14Q8NCE2 650 aa6.03□□□□□ -1.44
ECHDC1-218ENST00000525745 BANK1Q8NDB2 785 aa6.03□□□□□ -1.44
ECHDC1-218ENST00000525745 CCDC155Q8N6L0 562 aa6.02□□□□□ -1.45
ECHDC1-218ENST00000525745 SNRKQ9NRH2 765 aa6.02□□□□□ -1.45
ECHDC1-218ENST00000525745 NDUFB9Q9Y6M9 179 aa6.02□□□□□ -1.45
ECHDC1-218ENST00000525745 APBB1O00213 710 aa6.01□□□□□ -1.45
ECHDC1-218ENST00000525745 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-218ENST00000525745 PTGIRP43119 386 aa6.01□□□□□ -1.45
ECHDC1-218ENST00000525745 NR1H3Q13133 447 aa6.01□□□□□ -1.45
ECHDC1-218ENST00000525745 RNF217Q8TC41 542 aa6.01□□□□□ -1.45
ECHDC1-218ENST00000525745 KDF1Q8NAX2 398 aaPredicted RBP6□□□□□ -1.45
ECHDC1-218ENST00000525745 TRIM52Q96A61 297 aa6□□□□□ -1.45
ECHDC1-218ENST00000525745 ZNF330Q9Y3S2 320 aaPredicted RBP6□□□□□ -1.45
ECHDC1-218ENST00000525745 CDC14CA4D256 554 aa5.99□□□□□ -1.45
ECHDC1-218ENST00000525745 SLC35F4A4IF30 521 aa5.99□□□□□ -1.45
ECHDC1-218ENST00000525745 ATP5J2-PTCD1G3V325 749 aa5.99□□□□□ -1.45
ECHDC1-218ENST00000525745 RNF20Q5VTR2 975 aa5.99□□□□□ -1.45
ECHDC1-218ENST00000525745 FOXD4L5Q5VV16 416 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-218ENST00000525745 MEN1O00255 615 aa5.98□□□□□ -1.45
ECHDC1-218ENST00000525745 GPR37L1O60883 481 aa5.98□□□□□ -1.45
ECHDC1-218ENST00000525745 ITGA6P23229 1130 aa5.98□□□□□ -1.45
ECHDC1-218ENST00000525745 LYSMD3Q7Z3D4 306 aa5.98□□□□□ -1.45
ECHDC1-218ENST00000525745 GPR161Q8N6U8 529 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-218ENST00000525745 ZNF592Q92610 1267 aa5.98□□□□□ -1.45
ECHDC1-218ENST00000525745 CNTNAP3BQ96NU0 1288 aa5.98□□□□□ -1.45
ECHDC1-218ENST00000525745 CNTNAP3Q9BZ76 1288 aa5.98□□□□□ -1.45
ECHDC1-218ENST00000525745 SOCS7O14512 581 aa5.97□□□□□ -1.45
ECHDC1-218ENST00000525745 MCCD1P59942 119 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-218ENST00000525745 KRT76Q01546 638 aa5.97□□□□□ -1.45
ECHDC1-218ENST00000525745 CC2D2BQ6DHV5 1058 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 496.3 ms