RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 KRT27Q7Z3Y8 459 aa19.93■□□□□ 0.78
LRRK1-204ENST00000525617 COL18A1P39060 1754 aa19.93■□□□□ 0.78
LRRK1-204ENST00000525617 BRWD3Q6RI45 1802 aa19.92■□□□□ 0.78
LRRK1-204ENST00000525617 TCP11L2Q8N4U5 519 aa19.92■□□□□ 0.78
LRRK1-204ENST00000525617 AXIN2Q9Y2T1 843 aa19.92■□□□□ 0.78
LRRK1-204ENST00000525617 THRAP3Q9Y2W1 955 aaKnown RBP19.92■□□□□ 0.78
LRRK1-204ENST00000525617 CRB1P82279 1406 aa19.92■□□□□ 0.78
LRRK1-204ENST00000525617 FYB1O15117 783 aa19.91■□□□□ 0.78
LRRK1-204ENST00000525617 CSB-PGBD3P0DP91 1061 aa19.91■□□□□ 0.78
LRRK1-204ENST00000525617 BARGINQ6ZT62 677 aa19.91■□□□□ 0.78
LRRK1-204ENST00000525617 TOM1L2Q6ZVM7 507 aa19.91■□□□□ 0.78
LRRK1-204ENST00000525617 ABCC6O95255 1503 aa19.91■□□□□ 0.78
LRRK1-204ENST00000525617 GGNBP2Q9H3C7 697 aa19.9■□□□□ 0.78
LRRK1-204ENST00000525617 LTN1O94822 1766 aa19.9■□□□□ 0.78
LRRK1-204ENST00000525617 WDR17Q8IZU2 1322 aa19.89■□□□□ 0.77
LRRK1-204ENST00000525617 RGPD5Q99666 1765 aa19.89■□□□□ 0.77
LRRK1-204ENST00000525617 CARD14Q9BXL6 1004 aa19.89■□□□□ 0.77
LRRK1-204ENST00000525617 NSD3Q9BZ95 1437 aa19.89■□□□□ 0.77
LRRK1-204ENST00000525617 CCDC125Q86Z20 511 aa19.88■□□□□ 0.77
LRRK1-204ENST00000525617 KIF20BQ96Q89 1820 aa19.88■□□□□ 0.77
LRRK1-204ENST00000525617 THSD7AQ9UPZ6 1657 aa19.87■□□□□ 0.77
LRRK1-204ENST00000525617 CGNL1Q0VF96 1302 aa19.85■□□□□ 0.77
LRRK1-204ENST00000525617 C11orf95C9JLR9 678 aaPredicted RBP19.84■□□□□ 0.77
LRRK1-204ENST00000525617 AMPHP49418 695 aa19.84■□□□□ 0.77
LRRK1-204ENST00000525617 PDE3BQ13370 1112 aa19.84■□□□□ 0.77
LRRK1-204ENST00000525617 IP6K1Q92551 441 aa19.84■□□□□ 0.77
LRRK1-204ENST00000525617 CARD10Q9BWT7 1032 aa19.84■□□□□ 0.77
LRRK1-204ENST00000525617 BLMP54132 1417 aaPredicted RBP19.84■□□□□ 0.77
LRRK1-204ENST00000525617 SF3B2Q13435 895 aaKnown RBP19.83■□□□□ 0.77
LRRK1-204ENST00000525617 PANK3Q9H999 370 aa19.83■□□□□ 0.77
LRRK1-204ENST00000525617 ERBB3P21860 1342 aa19.82■□□□□ 0.76
LRRK1-204ENST00000525617 MAP3K19Q56UN5 1328 aa19.82■□□□□ 0.76
LRRK1-204ENST00000525617 ANKRD24Q8TF21 1146 aa19.82■□□□□ 0.76
LRRK1-204ENST00000525617 CCDC7Q96M83 1385 aa19.82■□□□□ 0.76
LRRK1-204ENST00000525617 FBLN1P23142 703 aa19.81■□□□□ 0.76
LRRK1-204ENST00000525617 CDCA7Q9BWT1 371 aaPredicted RBP19.81■□□□□ 0.76
LRRK1-204ENST00000525617 NLRP2Q9NX02 1062 aa19.81■□□□□ 0.76
LRRK1-204ENST00000525617 KIF7Q2M1P5 1343 aa19.8■□□□□ 0.76
LRRK1-204ENST00000525617 HOXC9P31274 260 aa19.79■□□□□ 0.76
LRRK1-204ENST00000525617 RRS1Q15050 365 aaKnown RBP19.79■□□□□ 0.76
LRRK1-204ENST00000525617 FAM182BQ5T319 152 aa19.79■□□□□ 0.76
LRRK1-204ENST00000525617 PARP4Q9UKK3 1724 aaKnown RBP19.79■□□□□ 0.76
LRRK1-204ENST00000525617 DDB1Q16531 1140 aa19.78■□□□□ 0.76
LRRK1-204ENST00000525617 FAM196AQ6ZSG2 479 aa19.78■□□□□ 0.76
LRRK1-204ENST00000525617 LTV1Q96GA3 475 aaPredicted RBP19.78■□□□□ 0.76
LRRK1-204ENST00000525617 RTL1A6NKG5 1358 aa19.78■□□□□ 0.76
LRRK1-204ENST00000525617 KNSTRNQ9Y448 316 aa19.76■□□□□ 0.75
LRRK1-204ENST00000525617 KIF24Q5T7B8 1368 aa19.75■□□□□ 0.75
LRRK1-204ENST00000525617 WNK3Q9BYP7 1800 aa19.75■□□□□ 0.75
LRRK1-204ENST00000525617 FAM208AQ9UK61 1670 aaKnown RBP19.75■□□□□ 0.75
LRRK1-204ENST00000525617 EXOC5O00471 708 aa19.74■□□□□ 0.75
LRRK1-204ENST00000525617 LRRC37A3O60309 1634 aa19.73■□□□□ 0.75
LRRK1-204ENST00000525617 NSD2O96028 1365 aa19.73■□□□□ 0.75
LRRK1-204ENST00000525617 FLT4P35916 1363 aa19.73■□□□□ 0.75
LRRK1-204ENST00000525617 IL2RBP14784 551 aa19.73■□□□□ 0.75
LRRK1-204ENST00000525617 SMG6Q86US8 1419 aaKnown RBP19.73■□□□□ 0.75
LRRK1-204ENST00000525617 ANKRD26Q9UPS8 1709 aa19.73■□□□□ 0.75
LRRK1-204ENST00000525617 DISP2A7MBM2 1401 aa19.72■□□□□ 0.75
LRRK1-204ENST00000525617 PPM1GO15355 546 aaPredicted RBP19.72■□□□□ 0.75
LRRK1-204ENST00000525617 RGPD1P0DJD0 1748 aa19.71■□□□□ 0.75
LRRK1-204ENST00000525617 BAG6P46379 1132 aa19.71■□□□□ 0.75
LRRK1-204ENST00000525617 INSRP06213 1382 aa19.7■□□□□ 0.74
LRRK1-204ENST00000525617 OVOS2A0A0G2JMS6 1433 aa19.7■□□□□ 0.74
LRRK1-204ENST00000525617 TNNT2P45379 298 aaPredicted RBP19.7■□□□□ 0.74
LRRK1-204ENST00000525617 HSP90AB2PQ58FF8 381 aa19.7■□□□□ 0.74
LRRK1-204ENST00000525617 EMILIN1Q9Y6C2 1016 aa19.7■□□□□ 0.74
LRRK1-204ENST00000525617 MAP2P11137 1827 aaKnown RBP19.69■□□□□ 0.74
LRRK1-204ENST00000525617 TRIM37O94972 964 aa19.69■□□□□ 0.74
LRRK1-204ENST00000525617 DEFB132Q7Z7B7 95 aa19.69■□□□□ 0.74
LRRK1-204ENST00000525617 MORC1Q86VD1 984 aa19.69■□□□□ 0.74
LRRK1-204ENST00000525617 WASHC2AQ641Q2 1341 aa19.69■□□□□ 0.74
LRRK1-204ENST00000525617 PEAK1Q9H792 1746 aa19.68■□□□□ 0.74
LRRK1-204ENST00000525617 POLKQ9UBT6 870 aa19.67■□□□□ 0.74
LRRK1-204ENST00000525617 TNS2Q63HR2 1409 aa19.67■□□□□ 0.74
LRRK1-204ENST00000525617 MARCH10Q8NA82 808 aaPredicted RBP19.66■□□□□ 0.74
LRRK1-204ENST00000525617 EP400Q96L91 3159 aa19.65■□□□□ 0.74
LRRK1-204ENST00000525617 RGPD2P0DJD1 1756 aa19.65■□□□□ 0.74
LRRK1-204ENST00000525617 NBPF6Q5VWK0 638 aa19.65■□□□□ 0.74
LRRK1-204ENST00000525617 NBPF4Q96M43 638 aa19.65■□□□□ 0.74
LRRK1-204ENST00000525617 APBA3O96018 575 aa19.64■□□□□ 0.73
LRRK1-204ENST00000525617 TNS1Q9HBL0 1735 aaKnown RBP19.63■□□□□ 0.73
LRRK1-204ENST00000525617 PER1O15534 1290 aaPredicted RBP19.63■□□□□ 0.73
LRRK1-204ENST00000525617 AMER1Q5JTC6 1135 aaPredicted RBP19.63■□□□□ 0.73
LRRK1-204ENST00000525617 EN1Q05925 392 aaPredicted RBP19.62■□□□□ 0.73
LRRK1-204ENST00000525617 RAPGEF4Q8WZA2 1011 aa19.62■□□□□ 0.73
LRRK1-204ENST00000525617 BCL9O00512 1426 aa19.61■□□□□ 0.73
LRRK1-204ENST00000525617 USHBP1Q8N6Y0 703 aa19.61■□□□□ 0.73
LRRK1-204ENST00000525617 TATP17735 454 aaPredicted RBP19.6■□□□□ 0.73
LRRK1-204ENST00000525617 SBF2Q86WG5 1849 aa19.6■□□□□ 0.73
LRRK1-204ENST00000525617 ZCRB1Q8TBF4 217 aaKnown RBP19.59■□□□□ 0.73
LRRK1-204ENST00000525617 DDX54Q8TDD1 881 aaKnown RBP19.59■□□□□ 0.73
LRRK1-204ENST00000525617 BCL11BQ9C0K0 894 aaPredicted RBP19.59■□□□□ 0.73
LRRK1-204ENST00000525617 CC2D1BQ5T0F9 858 aaKnown RBP19.58■□□□□ 0.72
LRRK1-204ENST00000525617 PARD3Q8TEW0 1356 aa19.57■□□□□ 0.72
LRRK1-204ENST00000525617 EZH2Q15910 746 aaKnown RBP19.57■□□□□ 0.72
LRRK1-204ENST00000525617 MEGF6O75095 1541 aa19.56■□□□□ 0.72
LRRK1-204ENST00000525617 EIF4A2Q14240 407 aaKnown RBP19.56■□□□□ 0.72
LRRK1-204ENST00000525617 CAMKK2Q96RR4 588 aa19.56■□□□□ 0.72
LRRK1-204ENST00000525617 NPC1L1Q9UHC9 1359 aa19.56■□□□□ 0.72
LRRK1-204ENST00000525617 ZEB1P37275 1124 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms