RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 STRN4Q9NRL3 753 aa16.47■□□□□ 0.23
GPATCH4-212ENST00000525375 KCNH5Q8NCM2 988 aa16.46■□□□□ 0.23
GPATCH4-212ENST00000525375 CDK12Q9NYV4 1490 aaPredicted RBP16.46■□□□□ 0.23
GPATCH4-212ENST00000525375 ABCC6O95255 1503 aa16.45■□□□□ 0.22
GPATCH4-212ENST00000525375 LARP1Q6PKG0 1096 aaKnown RBP16.45■□□□□ 0.22
GPATCH4-212ENST00000525375 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
GPATCH4-212ENST00000525375 EP400Q96L91 3159 aa16.44■□□□□ 0.22
GPATCH4-212ENST00000525375 RRS1Q15050 365 aaKnown RBP16.44■□□□□ 0.22
GPATCH4-212ENST00000525375 BRWD3Q6RI45 1802 aa16.44■□□□□ 0.22
GPATCH4-212ENST00000525375 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
GPATCH4-212ENST00000525375 SPATA31A5Q5VU36 1347 aa16.44■□□□□ 0.22
GPATCH4-212ENST00000525375 SPATA31A7Q8IWB4 1347 aa16.44■□□□□ 0.22
GPATCH4-212ENST00000525375 CCDC9Q9Y3X0 531 aaKnown RBP16.43■□□□□ 0.22
GPATCH4-212ENST00000525375 CGNL1Q0VF96 1302 aa16.43■□□□□ 0.22
GPATCH4-212ENST00000525375 WNK3Q9BYP7 1800 aa16.42■□□□□ 0.22
GPATCH4-212ENST00000525375 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
GPATCH4-212ENST00000525375 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
GPATCH4-212ENST00000525375 FAM98CQ17RN3 349 aaKnown RBP16.41■□□□□ 0.22
GPATCH4-212ENST00000525375 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
GPATCH4-212ENST00000525375 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
GPATCH4-212ENST00000525375 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
GPATCH4-212ENST00000525375 RGPD2P0DJD1 1756 aa16.4■□□□□ 0.22
GPATCH4-212ENST00000525375 CRB1P82279 1406 aa16.39■□□□□ 0.21
GPATCH4-212ENST00000525375 ERBB3P21860 1342 aa16.39■□□□□ 0.21
GPATCH4-212ENST00000525375 WDR17Q8IZU2 1322 aa16.39■□□□□ 0.21
GPATCH4-212ENST00000525375 HOXC9P31274 260 aa16.38■□□□□ 0.21
GPATCH4-212ENST00000525375 ZEB1P37275 1124 aaPredicted RBP16.38■□□□□ 0.21
GPATCH4-212ENST00000525375 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
GPATCH4-212ENST00000525375 EVA1CP58658 441 aa16.38■□□□□ 0.21
GPATCH4-212ENST00000525375 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
GPATCH4-212ENST00000525375 SEPT12Q8IYM1 358 aa16.37■□□□□ 0.21
GPATCH4-212ENST00000525375 IP6K1Q92551 441 aa16.37■□□□□ 0.21
GPATCH4-212ENST00000525375 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
GPATCH4-212ENST00000525375 RTL1A6NKG5 1358 aa16.37■□□□□ 0.21
GPATCH4-212ENST00000525375 NSD2O96028 1365 aa16.37■□□□□ 0.21
GPATCH4-212ENST00000525375 BLMP54132 1417 aaPredicted RBP16.36■□□□□ 0.21
GPATCH4-212ENST00000525375 MAP2P11137 1827 aaKnown RBP16.36■□□□□ 0.21
GPATCH4-212ENST00000525375 ONECUT3O60422 494 aaPredicted RBP16.36■□□□□ 0.21
GPATCH4-212ENST00000525375 ANKRD24Q8TF21 1146 aa16.36■□□□□ 0.21
GPATCH4-212ENST00000525375 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
GPATCH4-212ENST00000525375 SOCS7O14512 581 aa16.35■□□□□ 0.21
GPATCH4-212ENST00000525375 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
GPATCH4-212ENST00000525375 TOM1L2Q6ZVM7 507 aa16.35■□□□□ 0.21
GPATCH4-212ENST00000525375 LTV1Q96GA3 475 aaPredicted RBP16.35■□□□□ 0.21
GPATCH4-212ENST00000525375 PARP4Q9UKK3 1724 aaKnown RBP16.35■□□□□ 0.21
GPATCH4-212ENST00000525375 DISP2A7MBM2 1401 aa16.35■□□□□ 0.21
GPATCH4-212ENST00000525375 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
GPATCH4-212ENST00000525375 AMPHP49418 695 aa16.34■□□□□ 0.21
GPATCH4-212ENST00000525375 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
GPATCH4-212ENST00000525375 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
GPATCH4-212ENST00000525375 CSB-PGBD3P0DP91 1061 aa16.33■□□□□ 0.2
GPATCH4-212ENST00000525375 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
GPATCH4-212ENST00000525375 FLT4P35916 1363 aa16.33■□□□□ 0.2
GPATCH4-212ENST00000525375 A0A0G2JS52 829 aa16.32■□□□□ 0.2
GPATCH4-212ENST00000525375 MYT1Q01538 1121 aa16.32■□□□□ 0.2
GPATCH4-212ENST00000525375 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
GPATCH4-212ENST00000525375 TCP11L2Q8N4U5 519 aa16.32■□□□□ 0.2
GPATCH4-212ENST00000525375 INSRP06213 1382 aa16.31■□□□□ 0.2
GPATCH4-212ENST00000525375 BARGINQ6ZT62 677 aa16.31■□□□□ 0.2
GPATCH4-212ENST00000525375 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
GPATCH4-212ENST00000525375 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
GPATCH4-212ENST00000525375 PPM1GO15355 546 aaPredicted RBP16.3■□□□□ 0.2
GPATCH4-212ENST00000525375 USHBP1Q8N6Y0 703 aa16.3■□□□□ 0.2
GPATCH4-212ENST00000525375 NLRP2Q9NX02 1062 aa16.29■□□□□ 0.2
GPATCH4-212ENST00000525375 MEGF6O75095 1541 aa16.29■□□□□ 0.2
GPATCH4-212ENST00000525375 KIF24Q5T7B8 1368 aa16.28■□□□□ 0.2
GPATCH4-212ENST00000525375 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
GPATCH4-212ENST00000525375 THRAP3Q9Y2W1 955 aaKnown RBP16.28■□□□□ 0.2
GPATCH4-212ENST00000525375 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
GPATCH4-212ENST00000525375 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
GPATCH4-212ENST00000525375 KRT27Q7Z3Y8 459 aa16.27■□□□□ 0.2
GPATCH4-212ENST00000525375 UPF1Q92900 1129 aaKnown RBP eCLIP16.27■□□□□ 0.2
GPATCH4-212ENST00000525375 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
GPATCH4-212ENST00000525375 DDX10Q13206 875 aaKnown RBP16.26■□□□□ 0.19
GPATCH4-212ENST00000525375 COL3A1P02461 1466 aaPredicted RBP16.25■□□□□ 0.19
GPATCH4-212ENST00000525375 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
GPATCH4-212ENST00000525375 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
GPATCH4-212ENST00000525375 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
GPATCH4-212ENST00000525375 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
GPATCH4-212ENST00000525375 TNS1Q9HBL0 1735 aaKnown RBP16.23■□□□□ 0.19
GPATCH4-212ENST00000525375 IL2RBP14784 551 aa16.21■□□□□ 0.19
GPATCH4-212ENST00000525375 MTHFSP49914 203 aa16.21■□□□□ 0.19
GPATCH4-212ENST00000525375 DDB1Q16531 1140 aa16.21■□□□□ 0.19
GPATCH4-212ENST00000525375 MARCH10Q8NA82 808 aaPredicted RBP16.21■□□□□ 0.19
GPATCH4-212ENST00000525375 EYA1Q99502 592 aa16.21■□□□□ 0.19
GPATCH4-212ENST00000525375 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
GPATCH4-212ENST00000525375 PARD3Q8TEW0 1356 aa16.19■□□□□ 0.18
GPATCH4-212ENST00000525375 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
GPATCH4-212ENST00000525375 PKD1L3Q7Z443 1732 aa16.19■□□□□ 0.18
GPATCH4-212ENST00000525375 PDE3BQ13370 1112 aa16.18■□□□□ 0.18
GPATCH4-212ENST00000525375 AEBP1Q8IUX7 1158 aa16.18■□□□□ 0.18
GPATCH4-212ENST00000525375 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
GPATCH4-212ENST00000525375 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
GPATCH4-212ENST00000525375 PPP2R1AP30153 589 aa16.17■□□□□ 0.18
GPATCH4-212ENST00000525375 IL13P35225 146 aa16.17■□□□□ 0.18
GPATCH4-212ENST00000525375 PTF1AQ7RTS3 328 aa16.17■□□□□ 0.18
GPATCH4-212ENST00000525375 CDCA7Q9BWT1 371 aaPredicted RBP16.17■□□□□ 0.18
GPATCH4-212ENST00000525375 DOT1LQ8TEK3 1739 aa16.14■□□□□ 0.17
GPATCH4-212ENST00000525375 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
GPATCH4-212ENST00000525375 EXOC5O00471 708 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms