RNA–Protein interactions for RNA: ENST00000524683.5

SC5D-203, Transcript of sterol-C5-desaturase, humanhuman

TSL 2

Gene SC5D, Length 2,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-203ENST00000524683 SLIT3O75094 1523 aa12.89□□□□□ -0.35
SC5D-203ENST00000524683 PRDM11Q9NQV5 511 aa12.88□□□□□ -0.35
SC5D-203ENST00000524683 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
SC5D-203ENST00000524683 STK26Q9P289 416 aa12.88□□□□□ -0.35
SC5D-203ENST00000524683 NHSQ6T4R5 1651 aa12.88□□□□□ -0.35
SC5D-203ENST00000524683 TRIM37O94972 964 aa12.87□□□□□ -0.35
SC5D-203ENST00000524683 CDCA7Q9BWT1 371 aaPredicted RBP12.87□□□□□ -0.35
SC5D-203ENST00000524683 EP400Q96L91 3159 aa12.87□□□□□ -0.35
SC5D-203ENST00000524683 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
SC5D-203ENST00000524683 KIAA0232Q92628 1395 aa12.87□□□□□ -0.35
SC5D-203ENST00000524683 RBM19Q9Y4C8 960 aaKnown RBP12.87□□□□□ -0.35
SC5D-203ENST00000524683 TCP11L2Q8N4U5 519 aa12.86□□□□□ -0.35
SC5D-203ENST00000524683 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
SC5D-203ENST00000524683 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
SC5D-203ENST00000524683 CRB1P82279 1406 aa12.86□□□□□ -0.35
SC5D-203ENST00000524683 CFAP70Q5T0N1 1121 aa12.86□□□□□ -0.35
SC5D-203ENST00000524683 ANP32EQ9BTT0 268 aa12.86□□□□□ -0.35
SC5D-203ENST00000524683 COL18A1P39060 1754 aa12.86□□□□□ -0.35
SC5D-203ENST00000524683 WASLO00401 505 aaPredicted RBP12.85□□□□□ -0.35
SC5D-203ENST00000524683 RALBP1Q15311 655 aa12.85□□□□□ -0.35
SC5D-203ENST00000524683 PRAM1Q96QH2 718 aa12.85□□□□□ -0.35
SC5D-203ENST00000524683 USP54Q70EL1 1684 aa12.84□□□□□ -0.35
SC5D-203ENST00000524683 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
SC5D-203ENST00000524683 C1QTNF8P60827 252 aa12.84□□□□□ -0.35
SC5D-203ENST00000524683 ZNF784Q8NCA9 323 aaPredicted RBP12.84□□□□□ -0.35
SC5D-203ENST00000524683 PRR36Q9H6K5 1346 aa12.84□□□□□ -0.35
SC5D-203ENST00000524683 TMEM132EQ6IEE7 984 aa12.84□□□□□ -0.35
SC5D-203ENST00000524683 PANK3Q9H999 370 aa12.84□□□□□ -0.35
SC5D-203ENST00000524683 QRICH2Q9H0J4 1663 aa12.84□□□□□ -0.35
SC5D-203ENST00000524683 MYBBP1AQ9BQG0 1328 aaKnown RBP12.83□□□□□ -0.36
SC5D-203ENST00000524683 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
SC5D-203ENST00000524683 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
SC5D-203ENST00000524683 CDCA8Q53HL2 280 aa12.83□□□□□ -0.36
SC5D-203ENST00000524683 POGKQ9P215 609 aa12.83□□□□□ -0.36
SC5D-203ENST00000524683 PER1O15534 1290 aaPredicted RBP12.82□□□□□ -0.36
SC5D-203ENST00000524683 PLEKHG3A1L390 1219 aa12.81□□□□□ -0.36
SC5D-203ENST00000524683 LMOD2Q6P5Q4 547 aa12.81□□□□□ -0.36
SC5D-203ENST00000524683 ZBED9Q6R2W3 1325 aa12.81□□□□□ -0.36
SC5D-203ENST00000524683 CC2D1BQ5T0F9 858 aaKnown RBP12.8□□□□□ -0.36
SC5D-203ENST00000524683 PTGER2P43116 358 aa12.8□□□□□ -0.36
SC5D-203ENST00000524683 PNISRQ8TF01 805 aaKnown RBP12.8□□□□□ -0.36
SC5D-203ENST00000524683 NGDNQ8NEJ9 315 aaKnown RBP12.79□□□□□ -0.36
SC5D-203ENST00000524683 MTFR1LQ9H019 292 aa12.79□□□□□ -0.36
SC5D-203ENST00000524683 SHANK3Q9BYB0 1731 aa12.79□□□□□ -0.36
SC5D-203ENST00000524683 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
SC5D-203ENST00000524683 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
SC5D-203ENST00000524683 NLRP13Q86W25 1043 aa12.78□□□□□ -0.36
SC5D-203ENST00000524683 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
SC5D-203ENST00000524683 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
SC5D-203ENST00000524683 EVA1CP58658 441 aa12.77□□□□□ -0.36
SC5D-203ENST00000524683 STK32BQ9NY57 414 aa12.77□□□□□ -0.36
SC5D-203ENST00000524683 KNSTRNQ9Y448 316 aa12.77□□□□□ -0.36
SC5D-203ENST00000524683 SLC16A10Q8TF71 515 aa12.76□□□□□ -0.37
SC5D-203ENST00000524683 TNS2Q63HR2 1409 aa12.75□□□□□ -0.37
SC5D-203ENST00000524683 HMGB2P26583 209 aaKnown RBP12.75□□□□□ -0.37
SC5D-203ENST00000524683 TRAK1Q9UPV9 953 aa12.75□□□□□ -0.37
SC5D-203ENST00000524683 FAM208AQ9UK61 1670 aaKnown RBP12.75□□□□□ -0.37
SC5D-203ENST00000524683 FAM182BQ5T319 152 aa12.74□□□□□ -0.37
SC5D-203ENST00000524683 NUDT16Q96DE0 195 aaKnown RBP12.74□□□□□ -0.37
SC5D-203ENST00000524683 SYT17Q9BSW7 474 aa12.73□□□□□ -0.37
SC5D-203ENST00000524683 CENPJQ9HC77 1338 aaPredicted RBP12.73□□□□□ -0.37
SC5D-203ENST00000524683 SLC15A2Q16348 729 aa12.73□□□□□ -0.37
SC5D-203ENST00000524683 LARP1Q6PKG0 1096 aaKnown RBP12.73□□□□□ -0.37
SC5D-203ENST00000524683 STRN4Q9NRL3 753 aa12.73□□□□□ -0.37
SC5D-203ENST00000524683 CCDC61Q9Y6R9 512 aa12.73□□□□□ -0.37
SC5D-203ENST00000524683 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
SC5D-203ENST00000524683 PIK3C2AO00443 1686 aa12.72□□□□□ -0.37
SC5D-203ENST00000524683 WDR17Q8IZU2 1322 aa12.71□□□□□ -0.37
SC5D-203ENST00000524683 GIGYF1O75420 1035 aaPredicted RBP12.71□□□□□ -0.37
SC5D-203ENST00000524683 DDB1Q16531 1140 aa12.71□□□□□ -0.37
SC5D-203ENST00000524683 PPP4R2Q9NY27 417 aa12.71□□□□□ -0.37
SC5D-203ENST00000524683 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.37
SC5D-203ENST00000524683 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.38
SC5D-203ENST00000524683 BTAF1O14981 1849 aa12.7□□□□□ -0.38
SC5D-203ENST00000524683 MSH5O43196 834 aa12.7□□□□□ -0.38
SC5D-203ENST00000524683 ACEP12821 1306 aa12.7□□□□□ -0.38
SC5D-203ENST00000524683 LY75O60449 1722 aa12.7□□□□□ -0.38
SC5D-203ENST00000524683 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
SC5D-203ENST00000524683 CHRNA2Q15822 529 aa12.7□□□□□ -0.38
SC5D-203ENST00000524683 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
SC5D-203ENST00000524683 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
SC5D-203ENST00000524683 FHDC1Q9C0D6 1143 aaPredicted RBP12.69□□□□□ -0.38
SC5D-203ENST00000524683 USP6P35125 1406 aa12.69□□□□□ -0.38
SC5D-203ENST00000524683 SBNO2Q9Y2G9 1366 aa12.69□□□□□ -0.38
SC5D-203ENST00000524683 GCP02774 474 aa12.69□□□□□ -0.38
SC5D-203ENST00000524683 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
SC5D-203ENST00000524683 ARXQ96QS3 562 aa12.69□□□□□ -0.38
SC5D-203ENST00000524683 CARD10Q9BWT7 1032 aa12.69□□□□□ -0.38
SC5D-203ENST00000524683 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
SC5D-203ENST00000524683 CICQ96RK0 1608 aaPredicted RBP12.68□□□□□ -0.38
SC5D-203ENST00000524683 NFAT5O94916 1531 aa12.68□□□□□ -0.38
SC5D-203ENST00000524683 PROM2Q8N271 834 aa12.67□□□□□ -0.38
SC5D-203ENST00000524683 TUBGCP6Q96RT7 1819 aa12.67□□□□□ -0.38
SC5D-203ENST00000524683 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
SC5D-203ENST00000524683 GRIN3BO60391 1043 aa12.66□□□□□ -0.38
SC5D-203ENST00000524683 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
SC5D-203ENST00000524683 SALL2Q9Y467 1007 aaPredicted RBP12.66□□□□□ -0.38
SC5D-203ENST00000524683 MON2Q7Z3U7 1717 aa12.66□□□□□ -0.38
SC5D-203ENST00000524683 SMG6Q86US8 1419 aaKnown RBP12.66□□□□□ -0.38
SC5D-203ENST00000524683 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms