RNA–Protein interactions for RNA: ENST00000524447.6

PSMC3-202, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-202ENST00000524447 BCL9LQ86UU0 1499 aa20.6■□□□□ 0.89
PSMC3-202ENST00000524447 COL14A1Q05707 1796 aaKnown RBP20.59■□□□□ 0.89
PSMC3-202ENST00000524447 PPM1GO15355 546 aaPredicted RBP20.59■□□□□ 0.89
PSMC3-202ENST00000524447 KIF20BQ96Q89 1820 aa20.59■□□□□ 0.89
PSMC3-202ENST00000524447 MAP3K19Q56UN5 1328 aa20.58■□□□□ 0.89
PSMC3-202ENST00000524447 USP54Q70EL1 1684 aa20.58■□□□□ 0.89
PSMC3-202ENST00000524447 CSB-PGBD3P0DP91 1061 aa20.58■□□□□ 0.89
PSMC3-202ENST00000524447 MARF1Q9Y4F3 1742 aaKnown RBP20.58■□□□□ 0.88
PSMC3-202ENST00000524447 GJD4Q96KN9 370 aaPredicted RBP20.57■□□□□ 0.88
PSMC3-202ENST00000524447 AXIN2Q9Y2T1 843 aa20.56■□□□□ 0.88
PSMC3-202ENST00000524447 VPS72Q15906 364 aa20.55■□□□□ 0.88
PSMC3-202ENST00000524447 PLCH1Q4KWH8 1693 aa20.54■□□□□ 0.88
PSMC3-202ENST00000524447 IP6K1Q92551 441 aa20.54■□□□□ 0.88
PSMC3-202ENST00000524447 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
PSMC3-202ENST00000524447 EMILIN1Q9Y6C2 1016 aa20.54■□□□□ 0.88
PSMC3-202ENST00000524447 HOXC9P31274 260 aa20.53■□□□□ 0.88
PSMC3-202ENST00000524447 LARP1Q6PKG0 1096 aaKnown RBP20.53■□□□□ 0.88
PSMC3-202ENST00000524447 USP35Q9P2H5 1018 aa20.53■□□□□ 0.88
PSMC3-202ENST00000524447 NPC1L1Q9UHC9 1359 aa20.53■□□□□ 0.88
PSMC3-202ENST00000524447 CAMTA1Q9Y6Y1 1673 aa20.53■□□□□ 0.88
PSMC3-202ENST00000524447 TOM1L2Q6ZVM7 507 aa20.52■□□□□ 0.88
PSMC3-202ENST00000524447 RTL1A6NKG5 1358 aa20.51■□□□□ 0.87
PSMC3-202ENST00000524447 A0A0G2JS52 829 aa20.51■□□□□ 0.87
PSMC3-202ENST00000524447 MYT1Q01538 1121 aa20.51■□□□□ 0.87
PSMC3-202ENST00000524447 ANKRD24Q8TF21 1146 aa20.51■□□□□ 0.87
PSMC3-202ENST00000524447 POLKQ9UBT6 870 aa20.51■□□□□ 0.87
PSMC3-202ENST00000524447 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
PSMC3-202ENST00000524447 NWD2Q9ULI1 1742 aa20.5■□□□□ 0.87
PSMC3-202ENST00000524447 CCDC125Q86Z20 511 aa20.5■□□□□ 0.87
PSMC3-202ENST00000524447 FLT4P35916 1363 aa20.49■□□□□ 0.87
PSMC3-202ENST00000524447 LMO7Q8WWI1 1683 aa20.49■□□□□ 0.87
PSMC3-202ENST00000524447 NLRP2Q9NX02 1062 aa20.49■□□□□ 0.87
PSMC3-202ENST00000524447 BLMP54132 1417 aaPredicted RBP20.49■□□□□ 0.87
PSMC3-202ENST00000524447 SPATA31A5Q5VU36 1347 aa20.49■□□□□ 0.87
PSMC3-202ENST00000524447 SPATA31A7Q8IWB4 1347 aa20.49■□□□□ 0.87
PSMC3-202ENST00000524447 WDR17Q8IZU2 1322 aa20.49■□□□□ 0.87
PSMC3-202ENST00000524447 ABCC6O95255 1503 aa20.48■□□□□ 0.87
PSMC3-202ENST00000524447 HSP90AB2PQ58FF8 381 aa20.48■□□□□ 0.87
PSMC3-202ENST00000524447 ERBB3P21860 1342 aa20.48■□□□□ 0.87
PSMC3-202ENST00000524447 ANKRD26Q9UPS8 1709 aa20.47■□□□□ 0.87
PSMC3-202ENST00000524447 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
PSMC3-202ENST00000524447 CRB1P82279 1406 aa20.46■□□□□ 0.87
PSMC3-202ENST00000524447 SMG6Q86US8 1419 aaKnown RBP20.46■□□□□ 0.87
PSMC3-202ENST00000524447 FAM98CQ17RN3 349 aaKnown RBP20.46■□□□□ 0.87
PSMC3-202ENST00000524447 NRAPQ86VF7 1730 aa20.46■□□□□ 0.87
PSMC3-202ENST00000524447 SPATA31A1Q5TZJ5 1347 aa20.46■□□□□ 0.87
PSMC3-202ENST00000524447 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.45■□□□□ 0.86
PSMC3-202ENST00000524447 LTN1O94822 1766 aa20.45■□□□□ 0.86
PSMC3-202ENST00000524447 TCP11L2Q8N4U5 519 aa20.45■□□□□ 0.86
PSMC3-202ENST00000524447 INSRP06213 1382 aa20.45■□□□□ 0.86
PSMC3-202ENST00000524447 COL18A1P39060 1754 aa20.44■□□□□ 0.86
PSMC3-202ENST00000524447 MTHFSP49914 203 aa20.43■□□□□ 0.86
PSMC3-202ENST00000524447 CARD10Q9BWT7 1032 aa20.43■□□□□ 0.86
PSMC3-202ENST00000524447 SEPT12Q8IYM1 358 aa20.42■□□□□ 0.86
PSMC3-202ENST00000524447 ONECUT3O60422 494 aaPredicted RBP20.41■□□□□ 0.86
PSMC3-202ENST00000524447 THRAP3Q9Y2W1 955 aaKnown RBP20.41■□□□□ 0.86
PSMC3-202ENST00000524447 GLI3P10071 1580 aa20.4■□□□□ 0.86
PSMC3-202ENST00000524447 PEAK1Q9H792 1746 aa20.39■□□□□ 0.86
PSMC3-202ENST00000524447 PPP2R1AP30153 589 aa20.39■□□□□ 0.85
PSMC3-202ENST00000524447 EIF4A2Q14240 407 aaKnown RBP20.38■□□□□ 0.85
PSMC3-202ENST00000524447 RALBP1Q15311 655 aa20.38■□□□□ 0.85
PSMC3-202ENST00000524447 BARGINQ6ZT62 677 aa20.38■□□□□ 0.85
PSMC3-202ENST00000524447 USHBP1Q8N6Y0 703 aa20.38■□□□□ 0.85
PSMC3-202ENST00000524447 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
PSMC3-202ENST00000524447 PARD3Q8TEW0 1356 aa20.37■□□□□ 0.85
PSMC3-202ENST00000524447 NBPF6Q5VWK0 638 aa20.36■□□□□ 0.85
PSMC3-202ENST00000524447 NBPF4Q96M43 638 aa20.36■□□□□ 0.85
PSMC3-202ENST00000524447 RGPD5Q99666 1765 aa20.36■□□□□ 0.85
PSMC3-202ENST00000524447 SF3B2Q13435 895 aaKnown RBP20.35■□□□□ 0.85
PSMC3-202ENST00000524447 KRT27Q7Z3Y8 459 aa20.35■□□□□ 0.85
PSMC3-202ENST00000524447 CDCA7Q9BWT1 371 aaPredicted RBP20.34■□□□□ 0.85
PSMC3-202ENST00000524447 EP400Q96L91 3159 aa20.34■□□□□ 0.85
PSMC3-202ENST00000524447 MAP2P11137 1827 aaKnown RBP20.33■□□□□ 0.85
PSMC3-202ENST00000524447 DIAPH1O60610 1272 aaKnown RBP20.33■□□□□ 0.85
PSMC3-202ENST00000524447 IL2RBP14784 551 aa20.33■□□□□ 0.85
PSMC3-202ENST00000524447 PDE3BQ13370 1112 aa20.33■□□□□ 0.85
PSMC3-202ENST00000524447 EYA1Q99502 592 aa20.33■□□□□ 0.85
PSMC3-202ENST00000524447 RAPGEF4Q8WZA2 1011 aa20.32■□□□□ 0.84
PSMC3-202ENST00000524447 ANP32CO43423 234 aa20.31■□□□□ 0.84
PSMC3-202ENST00000524447 DDB1Q16531 1140 aa20.31■□□□□ 0.84
PSMC3-202ENST00000524447 PRKRIP1Q9H875 184 aaPredicted RBP20.31■□□□□ 0.84
PSMC3-202ENST00000524447 MYBBP1AQ9BQG0 1328 aaKnown RBP20.3■□□□□ 0.84
PSMC3-202ENST00000524447 U2SURPO15042 1029 aaKnown RBP20.3■□□□□ 0.84
PSMC3-202ENST00000524447 IL13P35225 146 aa20.3■□□□□ 0.84
PSMC3-202ENST00000524447 EXOC5O00471 708 aa20.29■□□□□ 0.84
PSMC3-202ENST00000524447 TATP17735 454 aaPredicted RBP20.29■□□□□ 0.84
PSMC3-202ENST00000524447 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
PSMC3-202ENST00000524447 FAM208AQ9UK61 1670 aaKnown RBP20.28■□□□□ 0.84
PSMC3-202ENST00000524447 DISP2A7MBM2 1401 aa20.27■□□□□ 0.84
PSMC3-202ENST00000524447 IGSF1Q8N6C5 1336 aa20.27■□□□□ 0.83
PSMC3-202ENST00000524447 SULT6B1Q6IMI4 303 aa20.26■□□□□ 0.83
PSMC3-202ENST00000524447 FAM182BQ5T319 152 aa20.25■□□□□ 0.83
PSMC3-202ENST00000524447 THSD7AQ9UPZ6 1657 aa20.25■□□□□ 0.83
PSMC3-202ENST00000524447 HMOX1P09601 288 aa20.24■□□□□ 0.83
PSMC3-202ENST00000524447 AEBP1Q8IUX7 1158 aa20.24■□□□□ 0.83
PSMC3-202ENST00000524447 ZCRB1Q8TBF4 217 aaKnown RBP20.24■□□□□ 0.83
PSMC3-202ENST00000524447 MEGF6O75095 1541 aa20.23■□□□□ 0.83
PSMC3-202ENST00000524447 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
PSMC3-202ENST00000524447 DDX54Q8TDD1 881 aaKnown RBP20.23■□□□□ 0.83
PSMC3-202ENST00000524447 COL3A1P02461 1466 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms