RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
HDAC2-217ENST00000524334 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
HDAC2-217ENST00000524334 WDR17Q8IZU2 1322 aa17.74■□□□□ 0.43
HDAC2-217ENST00000524334 CARD14Q9BXL6 1004 aa17.74■□□□□ 0.43
HDAC2-217ENST00000524334 OVOS2A0A0J9YW53 1432 aa17.73■□□□□ 0.43
HDAC2-217ENST00000524334 CRB1P82279 1406 aa17.73■□□□□ 0.43
HDAC2-217ENST00000524334 OVOS2Q6IE36 1432 aa17.73■□□□□ 0.43
HDAC2-217ENST00000524334 CSB-PGBD3P0DP91 1061 aa17.73■□□□□ 0.43
HDAC2-217ENST00000524334 LMO7Q8WWI1 1683 aa17.73■□□□□ 0.43
HDAC2-217ENST00000524334 NFAT5O94916 1531 aa17.72■□□□□ 0.43
HDAC2-217ENST00000524334 GGNBP2Q9H3C7 697 aa17.72■□□□□ 0.43
HDAC2-217ENST00000524334 CARD10Q9BWT7 1032 aa17.71■□□□□ 0.43
HDAC2-217ENST00000524334 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
HDAC2-217ENST00000524334 IP6K1Q92551 441 aa17.7■□□□□ 0.42
HDAC2-217ENST00000524334 CDCA7Q9BWT1 371 aaPredicted RBP17.7■□□□□ 0.42
HDAC2-217ENST00000524334 ABCC6O95255 1503 aa17.69■□□□□ 0.42
HDAC2-217ENST00000524334 CGNL1Q0VF96 1302 aa17.69■□□□□ 0.42
HDAC2-217ENST00000524334 C11orf95C9JLR9 678 aaPredicted RBP17.68■□□□□ 0.42
HDAC2-217ENST00000524334 AMPHP49418 695 aa17.68■□□□□ 0.42
HDAC2-217ENST00000524334 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
HDAC2-217ENST00000524334 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
HDAC2-217ENST00000524334 FAM196AQ6ZSG2 479 aa17.67■□□□□ 0.42
HDAC2-217ENST00000524334 ANKRD24Q8TF21 1146 aa17.67■□□□□ 0.42
HDAC2-217ENST00000524334 PANK3Q9H999 370 aa17.67■□□□□ 0.42
HDAC2-217ENST00000524334 USP54Q70EL1 1684 aa17.67■□□□□ 0.42
HDAC2-217ENST00000524334 ERBB3P21860 1342 aa17.67■□□□□ 0.42
HDAC2-217ENST00000524334 MAP3K19Q56UN5 1328 aa17.67■□□□□ 0.42
HDAC2-217ENST00000524334 BLMP54132 1417 aaPredicted RBP17.66■□□□□ 0.42
HDAC2-217ENST00000524334 NLRP2Q9NX02 1062 aa17.66■□□□□ 0.42
HDAC2-217ENST00000524334 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
HDAC2-217ENST00000524334 EP400Q96L91 3159 aa17.65■□□□□ 0.42
HDAC2-217ENST00000524334 FBLN1P23142 703 aa17.64■□□□□ 0.41
HDAC2-217ENST00000524334 HOXC9P31274 260 aa17.64■□□□□ 0.41
HDAC2-217ENST00000524334 DDB1Q16531 1140 aa17.64■□□□□ 0.41
HDAC2-217ENST00000524334 FAM182BQ5T319 152 aa17.64■□□□□ 0.41
HDAC2-217ENST00000524334 COL18A1P39060 1754 aa17.63■□□□□ 0.41
HDAC2-217ENST00000524334 THSD7AQ9UPZ6 1657 aa17.63■□□□□ 0.41
HDAC2-217ENST00000524334 EXOC5O00471 708 aa17.62■□□□□ 0.41
HDAC2-217ENST00000524334 RRS1Q15050 365 aaKnown RBP17.62■□□□□ 0.41
HDAC2-217ENST00000524334 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
HDAC2-217ENST00000524334 RTL1A6NKG5 1358 aa17.61■□□□□ 0.41
HDAC2-217ENST00000524334 KIF24Q5T7B8 1368 aa17.61■□□□□ 0.41
HDAC2-217ENST00000524334 LTV1Q96GA3 475 aaPredicted RBP17.6■□□□□ 0.41
HDAC2-217ENST00000524334 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
HDAC2-217ENST00000524334 MYOM1P52179 1685 aa17.59■□□□□ 0.41
HDAC2-217ENST00000524334 IL2RBP14784 551 aa17.59■□□□□ 0.41
HDAC2-217ENST00000524334 BAG6P46379 1132 aa17.59■□□□□ 0.41
HDAC2-217ENST00000524334 NSD2O96028 1365 aa17.57■□□□□ 0.4
HDAC2-217ENST00000524334 TRIM37O94972 964 aa17.57■□□□□ 0.4
HDAC2-217ENST00000524334 DISP2A7MBM2 1401 aa17.56■□□□□ 0.4
HDAC2-217ENST00000524334 INSRP06213 1382 aa17.56■□□□□ 0.4
HDAC2-217ENST00000524334 FLT4P35916 1363 aa17.56■□□□□ 0.4
HDAC2-217ENST00000524334 HSP90AB2PQ58FF8 381 aa17.56■□□□□ 0.4
HDAC2-217ENST00000524334 DEFB132Q7Z7B7 95 aa17.56■□□□□ 0.4
HDAC2-217ENST00000524334 BRWD3Q6RI45 1802 aa17.56■□□□□ 0.4
HDAC2-217ENST00000524334 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
HDAC2-217ENST00000524334 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
HDAC2-217ENST00000524334 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
HDAC2-217ENST00000524334 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
HDAC2-217ENST00000524334 POLKQ9UBT6 870 aa17.54■□□□□ 0.4
HDAC2-217ENST00000524334 EMILIN1Q9Y6C2 1016 aa17.54■□□□□ 0.4
HDAC2-217ENST00000524334 OVOS2A0A0G2JMS6 1433 aa17.54■□□□□ 0.4
HDAC2-217ENST00000524334 WASHC2AQ641Q2 1341 aa17.53■□□□□ 0.4
HDAC2-217ENST00000524334 APBA3O96018 575 aa17.53■□□□□ 0.4
HDAC2-217ENST00000524334 TNNT2P45379 298 aaPredicted RBP17.53■□□□□ 0.4
HDAC2-217ENST00000524334 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
HDAC2-217ENST00000524334 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
HDAC2-217ENST00000524334 BCL9O00512 1426 aa17.51■□□□□ 0.39
HDAC2-217ENST00000524334 PER1O15534 1290 aaPredicted RBP17.51■□□□□ 0.39
HDAC2-217ENST00000524334 EN1Q05925 392 aaPredicted RBP17.51■□□□□ 0.39
HDAC2-217ENST00000524334 PARP4Q9UKK3 1724 aaKnown RBP17.51■□□□□ 0.39
HDAC2-217ENST00000524334 LTN1O94822 1766 aa17.51■□□□□ 0.39
HDAC2-217ENST00000524334 AMER1Q5JTC6 1135 aaPredicted RBP17.5■□□□□ 0.39
HDAC2-217ENST00000524334 RAPGEF4Q8WZA2 1011 aa17.5■□□□□ 0.39
HDAC2-217ENST00000524334 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
HDAC2-217ENST00000524334 TNS2Q63HR2 1409 aa17.49■□□□□ 0.39
HDAC2-217ENST00000524334 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
HDAC2-217ENST00000524334 CAMKK2Q96RR4 588 aa17.48■□□□□ 0.39
HDAC2-217ENST00000524334 KIF20BQ96Q89 1820 aa17.48■□□□□ 0.39
HDAC2-217ENST00000524334 PARD3Q8TEW0 1356 aa17.48■□□□□ 0.39
HDAC2-217ENST00000524334 RGPD5Q99666 1765 aa17.48■□□□□ 0.39
HDAC2-217ENST00000524334 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
HDAC2-217ENST00000524334 PLSCR1O15162 318 aa17.46■□□□□ 0.39
HDAC2-217ENST00000524334 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
HDAC2-217ENST00000524334 USHBP1Q8N6Y0 703 aa17.46■□□□□ 0.39
HDAC2-217ENST00000524334 LRRC37A3O60309 1634 aa17.46■□□□□ 0.39
HDAC2-217ENST00000524334 EZH2Q15910 746 aaKnown RBP17.45■□□□□ 0.38
HDAC2-217ENST00000524334 NPC1L1Q9UHC9 1359 aa17.43■□□□□ 0.38
HDAC2-217ENST00000524334 FAM208AQ9UK61 1670 aaKnown RBP17.43■□□□□ 0.38
HDAC2-217ENST00000524334 EIF4A2Q14240 407 aaKnown RBP17.43■□□□□ 0.38
HDAC2-217ENST00000524334 EYA1Q99502 592 aa17.43■□□□□ 0.38
HDAC2-217ENST00000524334 RGPD1P0DJD0 1748 aa17.42■□□□□ 0.38
HDAC2-217ENST00000524334 CC2D1BQ5T0F9 858 aaKnown RBP17.42■□□□□ 0.38
HDAC2-217ENST00000524334 PEAK1Q9H792 1746 aa17.41■□□□□ 0.38
HDAC2-217ENST00000524334 KCNQ2O43526 872 aa17.4■□□□□ 0.38
HDAC2-217ENST00000524334 NBPF14Q5TI25 921 aa17.4■□□□□ 0.38
HDAC2-217ENST00000524334 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
HDAC2-217ENST00000524334 ACSBG1Q96GR2 724 aa17.4■□□□□ 0.38
HDAC2-217ENST00000524334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.4■□□□□ 0.385e-7■■■■□ 20
HDAC2-217ENST00000524334 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms