RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
CTNNA1-240ENST00000523912 TERF2IPQ9NYB0 399 aa12.5□□□□□ -0.41
CTNNA1-240ENST00000523912 PIK3C2AO00443 1686 aa12.49□□□□□ -0.41
CTNNA1-240ENST00000523912 NINLQ9Y2I6 1382 aa12.49□□□□□ -0.41
CTNNA1-240ENST00000523912 PUS7Q96PZ0 661 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-240ENST00000523912 CDCA7Q9BWT1 371 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-240ENST00000523912 WDR17Q8IZU2 1322 aa12.48□□□□□ -0.41
CTNNA1-240ENST00000523912 PLSCR1O15162 318 aa12.48□□□□□ -0.41
CTNNA1-240ENST00000523912 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
CTNNA1-240ENST00000523912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■■□□□ 12.4
CTNNA1-240ENST00000523912 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-240ENST00000523912 SPON1Q9HCB6 807 aa12.47□□□□□ -0.41
CTNNA1-240ENST00000523912 NUP188Q5SRE5 1749 aa12.47□□□□□ -0.41
CTNNA1-240ENST00000523912 ABCC6O95255 1503 aa12.47□□□□□ -0.41
CTNNA1-240ENST00000523912 OVOS2A0A0G2JMS6 1433 aa12.46□□□□□ -0.41
CTNNA1-240ENST00000523912 OVOS2A0A0J9YW53 1432 aa12.46□□□□□ -0.41
CTNNA1-240ENST00000523912 BCL9O00512 1426 aa12.46□□□□□ -0.41
CTNNA1-240ENST00000523912 OVOS2Q6IE36 1432 aa12.46□□□□□ -0.41
CTNNA1-240ENST00000523912 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.41
CTNNA1-240ENST00000523912 AKAP12Q02952 1782 aa12.46□□□□□ -0.41
CTNNA1-240ENST00000523912 USP31Q70CQ4 1352 aa12.46□□□□□ -0.41
CTNNA1-240ENST00000523912 DDB1Q16531 1140 aa12.46□□□□□ -0.41
CTNNA1-240ENST00000523912 RGPD3A6NKT7 1758 aaPredicted RBP12.46□□□□□ -0.42
CTNNA1-240ENST00000523912 RGPD4Q7Z3J3 1758 aa12.46□□□□□ -0.42
CTNNA1-240ENST00000523912 KCNQ2O43526 872 aa12.45□□□□□ -0.42
CTNNA1-240ENST00000523912 A0A1W2PP64 1363 aa12.44□□□□□ -0.42
CTNNA1-240ENST00000523912 CCDC7Q96M83 1385 aa12.44□□□□□ -0.42
CTNNA1-240ENST00000523912 NFAT5O94916 1531 aa12.44□□□□□ -0.42
CTNNA1-240ENST00000523912 ST20-MTHFSA0A0A6YYL1 179 aa12.44□□□□□ -0.42
CTNNA1-240ENST00000523912 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
CTNNA1-240ENST00000523912 NME9Q86XW9 330 aa12.44□□□□□ -0.42
CTNNA1-240ENST00000523912 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
CTNNA1-240ENST00000523912 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
CTNNA1-240ENST00000523912 MON2Q7Z3U7 1717 aa12.44□□□□□ -0.42
CTNNA1-240ENST00000523912 PEAK1Q9H792 1746 aa12.43□□□□□ -0.42
CTNNA1-240ENST00000523912 CD163L1Q9NR16 1453 aa12.43□□□□□ -0.42
CTNNA1-240ENST00000523912 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
CTNNA1-240ENST00000523912 AXIN2Q9Y2T1 843 aa12.43□□□□□ -0.42
CTNNA1-240ENST00000523912 USP47Q96K76 1375 aa12.43□□□□□ -0.42
CTNNA1-240ENST00000523912 YY1P25490 414 aa12.42□□□□□ -0.42
CTNNA1-240ENST00000523912 TMF1P82094 1093 aa12.42□□□□□ -0.42
CTNNA1-240ENST00000523912 CDCA8Q53HL2 280 aa12.42□□□□□ -0.42
CTNNA1-240ENST00000523912 TESK2Q96S53 571 aa12.42□□□□□ -0.42
CTNNA1-240ENST00000523912 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-240ENST00000523912 TIMELESSQ9UNS1 1208 aa12.41□□□□□ -0.42
CTNNA1-240ENST00000523912 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
CTNNA1-240ENST00000523912 COG3Q96JB2 828 aa12.4□□□□□ -0.42
CTNNA1-240ENST00000523912 NLRP2Q9NX02 1062 aa12.4□□□□□ -0.42
CTNNA1-240ENST00000523912 COL18A1P39060 1754 aa12.4□□□□□ -0.42
CTNNA1-240ENST00000523912 LRRC37A3O60309 1634 aa12.4□□□□□ -0.42
CTNNA1-240ENST00000523912 ERBB3P21860 1342 aa12.39□□□□□ -0.43
CTNNA1-240ENST00000523912 USP54Q70EL1 1684 aa12.39□□□□□ -0.43
CTNNA1-240ENST00000523912 EXOC5O00471 708 aa12.39□□□□□ -0.43
CTNNA1-240ENST00000523912 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
CTNNA1-240ENST00000523912 SBF2Q86WG5 1849 aa12.39□□□□□ -0.43
CTNNA1-240ENST00000523912 TNS2Q63HR2 1409 aa12.38□□□□□ -0.43
CTNNA1-240ENST00000523912 ANKRD24Q8TF21 1146 aa12.38□□□□□ -0.43
CTNNA1-240ENST00000523912 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-240ENST00000523912 IL2RBP14784 551 aa12.36□□□□□ -0.43
CTNNA1-240ENST00000523912 PROM2Q8N271 834 aa12.36□□□□□ -0.43
CTNNA1-240ENST00000523912 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
CTNNA1-240ENST00000523912 ANO8Q9HCE9 1232 aaPredicted RBP12.36□□□□□ -0.43
CTNNA1-240ENST00000523912 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
CTNNA1-240ENST00000523912 AMPHP49418 695 aa12.35□□□□□ -0.43
CTNNA1-240ENST00000523912 IP6K1Q92551 441 aa12.35□□□□□ -0.43
CTNNA1-240ENST00000523912 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
CTNNA1-240ENST00000523912 RTL1A6NKG5 1358 aa12.34□□□□□ -0.43
CTNNA1-240ENST00000523912 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
CTNNA1-240ENST00000523912 STK32BQ9NY57 414 aa12.34□□□□□ -0.43
CTNNA1-240ENST00000523912 SLC15A2Q16348 729 aa12.33□□□□□ -0.44
CTNNA1-240ENST00000523912 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-240ENST00000523912 SMG6Q86US8 1419 aaKnown RBP12.33□□□□□ -0.44
CTNNA1-240ENST00000523912 MAP3K19Q56UN5 1328 aa12.33□□□□□ -0.44
CTNNA1-240ENST00000523912 PTGER2P43116 358 aa12.32□□□□□ -0.44
CTNNA1-240ENST00000523912 PTF1AQ7RTS3 328 aa12.32□□□□□ -0.44
CTNNA1-240ENST00000523912 LTN1O94822 1766 aa12.32□□□□□ -0.44
CTNNA1-240ENST00000523912 HOXC9P31274 260 aa12.31□□□□□ -0.44
CTNNA1-240ENST00000523912 MTFR1LQ9H019 292 aa12.31□□□□□ -0.44
CTNNA1-240ENST00000523912 RGPD5Q99666 1765 aa12.3□□□□□ -0.44
CTNNA1-240ENST00000523912 SGIP1Q9BQI5 828 aa12.3□□□□□ -0.44
CTNNA1-240ENST00000523912 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
CTNNA1-240ENST00000523912 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
CTNNA1-240ENST00000523912 FYB1O15117 783 aa12.29□□□□□ -0.44
CTNNA1-240ENST00000523912 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
CTNNA1-240ENST00000523912 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
CTNNA1-240ENST00000523912 SYT17Q9BSW7 474 aa12.29□□□□□ -0.44
CTNNA1-240ENST00000523912 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
CTNNA1-240ENST00000523912 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
CTNNA1-240ENST00000523912 ACSBG1Q96GR2 724 aa12.28□□□□□ -0.44
CTNNA1-240ENST00000523912 PDGFDQ9GZP0 370 aaPredicted RBP12.28□□□□□ -0.44
CTNNA1-240ENST00000523912 KIF24Q5T7B8 1368 aa12.28□□□□□ -0.44
CTNNA1-240ENST00000523912 NHSQ6T4R5 1651 aa12.27□□□□□ -0.45
CTNNA1-240ENST00000523912 RRS1Q15050 365 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-240ENST00000523912 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-240ENST00000523912 ATF5Q9Y2D1 282 aaPredicted RBP12.27□□□□□ -0.45
CTNNA1-240ENST00000523912 CGNL1Q0VF96 1302 aa12.27□□□□□ -0.45
CTNNA1-240ENST00000523912 FLT4P35916 1363 aa12.27□□□□□ -0.45
CTNNA1-240ENST00000523912 SLC16A10Q8TF71 515 aa12.26□□□□□ -0.45
CTNNA1-240ENST00000523912 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
CTNNA1-240ENST00000523912 FHDC1Q9C0D6 1143 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms