RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 SOBPA7XYQ1 873 aa7.9□□□□□ -1.14
HDAC2-216ENST00000523628 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
HDAC2-216ENST00000523628 RSPH6AQ9H0K4 717 aa7.9□□□□□ -1.14
HDAC2-216ENST00000523628 MAP4K5Q9Y4K4 846 aa7.9□□□□□ -1.14
HDAC2-216ENST00000523628 SH3BP5LQ7L8J4 393 aa7.89□□□□□ -1.15
HDAC2-216ENST00000523628 TRMT44Q8IYL2 757 aaKnown RBP7.89□□□□□ -1.15
HDAC2-216ENST00000523628 ZSCAN1Q8NBB4 408 aa7.89□□□□□ -1.15
HDAC2-216ENST00000523628 SMARCA4P51532 1647 aa7.89□□□□□ -1.15
HDAC2-216ENST00000523628 C6orf118Q5T5N4 469 aa7.88□□□□□ -1.15
HDAC2-216ENST00000523628 VASH1Q7L8A9 365 aaPredicted RBP7.88□□□□□ -1.15
HDAC2-216ENST00000523628 GPKOWQ92917 476 aaPredicted RBP eCLIP7.88□□□□□ -1.15
HDAC2-216ENST00000523628 POLR3EQ9NVU0 708 aa7.88□□□□□ -1.15
HDAC2-216ENST00000523628 UPP2O95045 317 aa7.87□□□□□ -1.15
HDAC2-216ENST00000523628 FSHRP23945 695 aa7.87□□□□□ -1.15
HDAC2-216ENST00000523628 LINC00528Q8N1L1 170 aa7.87□□□□□ -1.15
HDAC2-216ENST00000523628 MEIOBQ8N635 442 aa7.87□□□□□ -1.15
HDAC2-216ENST00000523628 CUX2O14529 1486 aa7.87□□□□□ -1.15
HDAC2-216ENST00000523628 MAGEB6P1A0A0J9YX57 407 aa7.86□□□□□ -1.15
HDAC2-216ENST00000523628 MAN1A2O60476 641 aa7.86□□□□□ -1.15
HDAC2-216ENST00000523628 BMP2P12643 396 aa7.86□□□□□ -1.15
HDAC2-216ENST00000523628 TIMELESSQ9UNS1 1208 aa7.86□□□□□ -1.15
HDAC2-216ENST00000523628 VSIG8P0DPA2 414 aa7.85□□□□□ -1.15
HDAC2-216ENST00000523628 CTDSPL2Q05D32 466 aa7.85□□□□□ -1.15
HDAC2-216ENST00000523628 EMILIN1Q9Y6C2 1016 aa7.85□□□□□ -1.15
HDAC2-216ENST00000523628 ATAD2BQ9ULI0 1458 aa7.85□□□□□ -1.15
HDAC2-216ENST00000523628 CCDC116Q8IYX3 515 aa7.84□□□□□ -1.15
HDAC2-216ENST00000523628 SOS2Q07890 1332 aaPredicted RBP7.83□□□□□ -1.16
HDAC2-216ENST00000523628 ERFEQ4G0M1 354 aa7.83□□□□□ -1.16
HDAC2-216ENST00000523628 PDXDC2PQ6P474 469 aa7.83□□□□□ -1.16
HDAC2-216ENST00000523628 TSEN34Q9BSV6 310 aaKnown RBP7.83□□□□□ -1.16
HDAC2-216ENST00000523628 CARD14Q9BXL6 1004 aa7.83□□□□□ -1.16
HDAC2-216ENST00000523628 BAZ1BQ9UIG0 1483 aaKnown RBP7.82□□□□□ -1.16
HDAC2-216ENST00000523628 LOC100996750A0A140TA64 210 aa7.82□□□□□ -1.16
HDAC2-216ENST00000523628 PPFIA3O75145 1194 aa7.82□□□□□ -1.16
HDAC2-216ENST00000523628 SKIV2LQ15477 1246 aaKnown RBP7.82□□□□□ -1.16
HDAC2-216ENST00000523628 ARHGAP9Q9BRR9 750 aa7.82□□□□□ -1.16
HDAC2-216ENST00000523628 KRTAP4-6Q9BYQ5 205 aa7.82□□□□□ -1.16
HDAC2-216ENST00000523628 LAMC3Q9Y6N6 1575 aa7.82□□□□□ -1.16
HDAC2-216ENST00000523628 LRRN4Q8WUT4 740 aa7.81□□□□□ -1.16
HDAC2-216ENST00000523628 FKBPLQ9UIM3 349 aa7.81□□□□□ -1.16
HDAC2-216ENST00000523628 DNMT3LQ9UJW3 386 aa7.81□□□□□ -1.16
HDAC2-216ENST00000523628 SH3D19Q5HYK7 790 aa7.8□□□□□ -1.16
HDAC2-216ENST00000523628 PPP1R26Q5T8A7 1209 aaPredicted RBP7.8□□□□□ -1.16
HDAC2-216ENST00000523628 ERCC6Q03468 1493 aa7.8□□□□□ -1.16
HDAC2-216ENST00000523628 FBXO31Q5XUX0 539 aaPredicted RBP7.79□□□□□ -1.16
HDAC2-216ENST00000523628 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.79□□□□□ -1.16
HDAC2-216ENST00000523628 PGPEP1Q9NXJ5 209 aa7.79□□□□□ -1.16
HDAC2-216ENST00000523628 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
HDAC2-216ENST00000523628 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
HDAC2-216ENST00000523628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.78□□□□□ -1.16
HDAC2-216ENST00000523628 PPP2R2DQ66LE6 453 aa7.78□□□□□ -1.16
HDAC2-216ENST00000523628 Q6ZVU0 165 aa7.78□□□□□ -1.16
HDAC2-216ENST00000523628 SLC10A4Q96EP9 437 aa7.78□□□□□ -1.16
HDAC2-216ENST00000523628 DDRGK1Q96HY6 314 aa7.78□□□□□ -1.16
HDAC2-216ENST00000523628 KCTD15Q96SI1 283 aaPredicted RBP7.78□□□□□ -1.16
HDAC2-216ENST00000523628 TTLL8A6PVC2 850 aa7.77□□□□□ -1.17
HDAC2-216ENST00000523628 CBLBQ13191 982 aa7.77□□□□□ -1.17
HDAC2-216ENST00000523628 NR6A1Q15406 480 aa7.77□□□□□ -1.17
HDAC2-216ENST00000523628 ZBTB33Q86T24 672 aa7.77□□□□□ -1.17
HDAC2-216ENST00000523628 PROCA1Q8NCQ7 364 aaPredicted RBP7.77□□□□□ -1.17
HDAC2-216ENST00000523628 PTK2Q05397 1052 aa7.76□□□□□ -1.17
HDAC2-216ENST00000523628 DHX9Q08211 1270 aaKnown RBP7.76□□□□□ -1.17
HDAC2-216ENST00000523628 PDS5BQ9NTI5 1447 aa7.76□□□□□ -1.17
HDAC2-216ENST00000523628 SPINT1O43278 529 aa7.75□□□□□ -1.17
HDAC2-216ENST00000523628 OCSTAMPQ9BR26 566 aa7.75□□□□□ -1.17
HDAC2-216ENST00000523628 ATP1B4Q9UN42 357 aaPredicted RBP7.75□□□□□ -1.17
HDAC2-216ENST00000523628 PTSQ03393 145 aa7.74□□□□□ -1.17
HDAC2-216ENST00000523628 INTS6LQ5JSJ4 861 aaKnown RBP7.74□□□□□ -1.17
HDAC2-216ENST00000523628 GPSM3Q9Y4H4 160 aa7.74□□□□□ -1.17
HDAC2-216ENST00000523628 FIGNL2A6NMB9 653 aa7.73□□□□□ -1.17
HDAC2-216ENST00000523628 AP1G2O75843 785 aa7.73□□□□□ -1.17
HDAC2-216ENST00000523628 GPR161Q8N6U8 529 aaKnown RBP7.72□□□□□ -1.17
HDAC2-216ENST00000523628 ADAM32Q8TC27 787 aa7.72□□□□□ -1.17
HDAC2-216ENST00000523628 CCDC155Q8N6L0 562 aa7.71□□□□□ -1.18
HDAC2-216ENST00000523628 PNMA1Q8ND90 353 aa7.71□□□□□ -1.18
HDAC2-216ENST00000523628 EPS8L1Q8TE68 723 aa7.71□□□□□ -1.18
HDAC2-216ENST00000523628 GOPCQ9HD26 462 aa7.71□□□□□ -1.18
HDAC2-216ENST00000523628 SLC35F4A4IF30 521 aa7.7□□□□□ -1.18
HDAC2-216ENST00000523628 RELBQ01201 579 aa7.7□□□□□ -1.18
HDAC2-216ENST00000523628 KRT76Q01546 638 aa7.7□□□□□ -1.18
HDAC2-216ENST00000523628 NBPF20Q3BBV1 942 aa7.7□□□□□ -1.18
HDAC2-216ENST00000523628 NANOS1Q8WY41 292 aaKnown RBP7.7□□□□□ -1.18
HDAC2-216ENST00000523628 AGBL1Q96MI9 1066 aa7.7□□□□□ -1.18
HDAC2-216ENST00000523628 USP17L8P0C7I0 530 aa7.69□□□□□ -1.18
HDAC2-216ENST00000523628 CNTNAP3BQ96NU0 1288 aa7.69□□□□□ -1.18
HDAC2-216ENST00000523628 CNTNAP3Q9BZ76 1288 aa7.69□□□□□ -1.18
HDAC2-216ENST00000523628 HMX1Q9NP08 348 aaPredicted RBP7.69□□□□□ -1.18
HDAC2-216ENST00000523628 MROH2BQ7Z745 1585 aa7.68□□□□□ -1.18
HDAC2-216ENST00000523628 CTSOP43234 321 aaPredicted RBP7.68□□□□□ -1.18
HDAC2-216ENST00000523628 DZIP3Q86Y13 1208 aaKnown RBP7.68□□□□□ -1.18
HDAC2-216ENST00000523628 INSM2Q96T92 566 aaPredicted RBP7.68□□□□□ -1.18
HDAC2-216ENST00000523628 TMPRSS4Q9NRS4 437 aa7.68□□□□□ -1.18
HDAC2-216ENST00000523628 RFC5P40937 340 aa7.67□□□□□ -1.18
HDAC2-216ENST00000523628 ZNF784Q8NCA9 323 aaPredicted RBP7.67□□□□□ -1.18
HDAC2-216ENST00000523628 COL25A1Q9BXS0 654 aaPredicted RBP7.67□□□□□ -1.18
HDAC2-216ENST00000523628 POLMQ9NP87 494 aaPredicted RBP7.67□□□□□ -1.18
HDAC2-216ENST00000523628 CADPSQ9ULU8 1353 aa7.67□□□□□ -1.18
HDAC2-216ENST00000523628 ADH1AP07327 375 aa7.66□□□□□ -1.18
HDAC2-216ENST00000523628 ITGA6P23229 1130 aa7.66□□□□□ -1.18
HDAC2-216ENST00000523628 KCNMA1Q12791 1236 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms