RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
CTNNA1-237ENST00000523275 CSB-PGBD3P0DP91 1061 aa16.63■□□□□ 0.25
CTNNA1-237ENST00000523275 DDB1Q16531 1140 aa16.63■□□□□ 0.25
CTNNA1-237ENST00000523275 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
CTNNA1-237ENST00000523275 CDCA7Q9BWT1 371 aaPredicted RBP16.63■□□□□ 0.25
CTNNA1-237ENST00000523275 AKAP12Q02952 1782 aa16.63■□□□□ 0.25
CTNNA1-237ENST00000523275 TNS1Q9HBL0 1735 aaKnown RBP16.62■□□□□ 0.25
CTNNA1-237ENST00000523275 CARD10Q9BWT7 1032 aa16.62■□□□□ 0.25
CTNNA1-237ENST00000523275 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
CTNNA1-237ENST00000523275 USP31Q70CQ4 1352 aa16.62■□□□□ 0.25
CTNNA1-237ENST00000523275 COL18A1P39060 1754 aa16.61■□□□□ 0.25
CTNNA1-237ENST00000523275 NME9Q86XW9 330 aa16.61■□□□□ 0.25
CTNNA1-237ENST00000523275 CD163L1Q9NR16 1453 aa16.6■□□□□ 0.25
CTNNA1-237ENST00000523275 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
CTNNA1-237ENST00000523275 ST20-MTHFSA0A0A6YYL1 179 aa16.59■□□□□ 0.25
CTNNA1-237ENST00000523275 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
CTNNA1-237ENST00000523275 TESK2Q96S53 571 aa16.59■□□□□ 0.25
CTNNA1-237ENST00000523275 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
CTNNA1-237ENST00000523275 OVOS2A0A0J9YW53 1432 aa16.59■□□□□ 0.25
CTNNA1-237ENST00000523275 OVOS2Q6IE36 1432 aa16.59■□□□□ 0.25
CTNNA1-237ENST00000523275 NFAT5O94916 1531 aa16.59■□□□□ 0.25
CTNNA1-237ENST00000523275 NBPF14Q5TI25 921 aa16.58■□□□□ 0.24
CTNNA1-237ENST00000523275 MON2Q7Z3U7 1717 aa16.57■□□□□ 0.24
CTNNA1-237ENST00000523275 EDC4Q6P2E9 1401 aaKnown RBP16.57■□□□□ 0.24
CTNNA1-237ENST00000523275 MARCH10Q8NA82 808 aaPredicted RBP16.57■□□□□ 0.24
CTNNA1-237ENST00000523275 LRP5O75197 1615 aa16.56■□□□□ 0.24
CTNNA1-237ENST00000523275 EXOC5O00471 708 aa16.56■□□□□ 0.24
CTNNA1-237ENST00000523275 BCL11BQ9C0K0 894 aaPredicted RBP16.56■□□□□ 0.24
CTNNA1-237ENST00000523275 A0A1W2PP64 1363 aa16.55■□□□□ 0.24
CTNNA1-237ENST00000523275 CCDC7Q96M83 1385 aa16.55■□□□□ 0.24
CTNNA1-237ENST00000523275 PLSCR1O15162 318 aa16.54■□□□□ 0.24
CTNNA1-237ENST00000523275 NLRP2Q9NX02 1062 aa16.54■□□□□ 0.24
CTNNA1-237ENST00000523275 LRRC37A3O60309 1634 aa16.54■□□□□ 0.24
CTNNA1-237ENST00000523275 ABCC6O95255 1503 aa16.54■□□□□ 0.24
CTNNA1-237ENST00000523275 NINLQ9Y2I6 1382 aa16.53■□□□□ 0.24
CTNNA1-237ENST00000523275 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
CTNNA1-237ENST00000523275 RGPD5Q99666 1765 aa16.53■□□□□ 0.24
CTNNA1-237ENST00000523275 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
CTNNA1-237ENST00000523275 BCL9O00512 1426 aa16.53■□□□□ 0.24
CTNNA1-237ENST00000523275 ERBB3P21860 1342 aa16.52■□□□□ 0.24
CTNNA1-237ENST00000523275 ANKRD24Q8TF21 1146 aa16.52■□□□□ 0.24
CTNNA1-237ENST00000523275 USP54Q70EL1 1684 aa16.5■□□□□ 0.23
CTNNA1-237ENST00000523275 RREB1Q92766 1687 aa16.5■□□□□ 0.23
CTNNA1-237ENST00000523275 IL2RBP14784 551 aa16.49■□□□□ 0.23
CTNNA1-237ENST00000523275 TMF1P82094 1093 aa16.49■□□□□ 0.23
CTNNA1-237ENST00000523275 IP6K1Q92551 441 aa16.49■□□□□ 0.23
CTNNA1-237ENST00000523275 COG3Q96JB2 828 aa16.49■□□□□ 0.23
CTNNA1-237ENST00000523275 USP47Q96K76 1375 aa16.48■□□□□ 0.23
CTNNA1-237ENST00000523275 NUP188Q5SRE5 1749 aa16.48■□□□□ 0.23
CTNNA1-237ENST00000523275 WNK3Q9BYP7 1800 aa16.47■□□□□ 0.23
CTNNA1-237ENST00000523275 PROM2Q8N271 834 aa16.47■□□□□ 0.23
CTNNA1-237ENST00000523275 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
CTNNA1-237ENST00000523275 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
CTNNA1-237ENST00000523275 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
CTNNA1-237ENST00000523275 ANKRD36BQ8N2N9 1353 aa16.46■□□□□ 0.23
CTNNA1-237ENST00000523275 KCNQ2O43526 872 aa16.45■□□□□ 0.22
CTNNA1-237ENST00000523275 CDCA8Q53HL2 280 aa16.45■□□□□ 0.22
CTNNA1-237ENST00000523275 LTV1Q96GA3 475 aaPredicted RBP16.45■□□□□ 0.22
CTNNA1-237ENST00000523275 SPON1Q9HCB6 807 aa16.45■□□□□ 0.22
CTNNA1-237ENST00000523275 MAP3K19Q56UN5 1328 aa16.45■□□□□ 0.22
CTNNA1-237ENST00000523275 LTN1O94822 1766 aa16.44■□□□□ 0.22
CTNNA1-237ENST00000523275 FBLN1P23142 703 aa16.44■□□□□ 0.22
CTNNA1-237ENST00000523275 AMPHP49418 695 aa16.44■□□□□ 0.22
CTNNA1-237ENST00000523275 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
CTNNA1-237ENST00000523275 FYB1O15117 783 aa16.43■□□□□ 0.22
CTNNA1-237ENST00000523275 HOXC9P31274 260 aa16.43■□□□□ 0.22
CTNNA1-237ENST00000523275 ACSBG1Q96GR2 724 aa16.43■□□□□ 0.22
CTNNA1-237ENST00000523275 ANO8Q9HCE9 1232 aaPredicted RBP16.43■□□□□ 0.22
CTNNA1-237ENST00000523275 RGPD3A6NKT7 1758 aaPredicted RBP16.42■□□□□ 0.22
CTNNA1-237ENST00000523275 RGPD4Q7Z3J3 1758 aa16.42■□□□□ 0.22
CTNNA1-237ENST00000523275 PCGF6Q9BYE7 350 aa16.42■□□□□ 0.22
CTNNA1-237ENST00000523275 GGNBP2Q9H3C7 697 aa16.41■□□□□ 0.22
CTNNA1-237ENST00000523275 DDX54Q8TDD1 881 aaKnown RBP16.4■□□□□ 0.22
CTNNA1-237ENST00000523275 STK32BQ9NY57 414 aa16.4■□□□□ 0.22
CTNNA1-237ENST00000523275 PPP1R1BQ9UD71 204 aaPredicted RBP16.4■□□□□ 0.22
CTNNA1-237ENST00000523275 CLSPNQ9HAW4 1339 aa16.4■□□□□ 0.22
CTNNA1-237ENST00000523275 RRS1Q15050 365 aaKnown RBP16.38■□□□□ 0.21
CTNNA1-237ENST00000523275 SLC15A2Q16348 729 aa16.38■□□□□ 0.21
CTNNA1-237ENST00000523275 PDGFDQ9GZP0 370 aaPredicted RBP16.38■□□□□ 0.21
CTNNA1-237ENST00000523275 RTL1A6NKG5 1358 aa16.37■□□□□ 0.21
CTNNA1-237ENST00000523275 ZCRB1Q8TBF4 217 aaKnown RBP16.36■□□□□ 0.21
CTNNA1-237ENST00000523275 CARD14Q9BXL6 1004 aa16.36■□□□□ 0.21
CTNNA1-237ENST00000523275 NHSQ6T4R5 1651 aa16.35■□□□□ 0.21
CTNNA1-237ENST00000523275 ZBTB7AO95365 584 aa16.35■□□□□ 0.21
CTNNA1-237ENST00000523275 NBPF6Q5VWK0 638 aa16.35■□□□□ 0.21
CTNNA1-237ENST00000523275 NBPF4Q96M43 638 aa16.35■□□□□ 0.21
CTNNA1-237ENST00000523275 FAM208AQ9UK61 1670 aaKnown RBP16.34■□□□□ 0.21
CTNNA1-237ENST00000523275 PRIM1P49642 420 aaKnown RBP16.33■□□□□ 0.2
CTNNA1-237ENST00000523275 HSP90AB2PQ58FF8 381 aa16.33■□□□□ 0.2
CTNNA1-237ENST00000523275 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
CTNNA1-237ENST00000523275 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
CTNNA1-237ENST00000523275 RAPGEF4Q8WZA2 1011 aa16.32■□□□□ 0.2
CTNNA1-237ENST00000523275 SYTL4Q96C24 671 aaPredicted RBP16.32■□□□□ 0.2
CTNNA1-237ENST00000523275 KAT6BQ8WYB5 2073 aa16.31■□□□□ 0.2
CTNNA1-237ENST00000523275 SMG6Q86US8 1419 aaKnown RBP16.31■□□□□ 0.2
CTNNA1-237ENST00000523275 INSRP06213 1382 aa16.31■□□□□ 0.2
CTNNA1-237ENST00000523275 KIF24Q5T7B8 1368 aa16.31■□□□□ 0.2
CTNNA1-237ENST00000523275 PTGER2P43116 358 aa16.31■□□□□ 0.2
CTNNA1-237ENST00000523275 SLC27A3Q5K4L6 730 aa16.31■□□□□ 0.2
CTNNA1-237ENST00000523275 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms