RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 ARHGEF25Q86VW2 580 aa22.81■■□□□ 1.24
CLN8-206ENST00000523237 FAM182BQ5T319 152 aa22.8■■□□□ 1.24
CLN8-206ENST00000523237 DEFB132Q7Z7B7 95 aa22.79■■□□□ 1.24
CLN8-206ENST00000523237 ZRANB1Q9UGI0 708 aa22.79■■□□□ 1.24
CLN8-206ENST00000523237 PARP4Q9UKK3 1724 aaKnown RBP22.79■■□□□ 1.24
CLN8-206ENST00000523237 NME9Q86XW9 330 aa22.78■■□□□ 1.24
CLN8-206ENST00000523237 ABCC6O95255 1503 aa22.77■■□□□ 1.24
CLN8-206ENST00000523237 TMF1P82094 1093 aa22.77■■□□□ 1.24
CLN8-206ENST00000523237 AXIN2Q9Y2T1 843 aa22.77■■□□□ 1.24
CLN8-206ENST00000523237 LTN1O94822 1766 aa22.76■■□□□ 1.23
CLN8-206ENST00000523237 BAG6P46379 1132 aa22.76■■□□□ 1.23
CLN8-206ENST00000523237 PDE3BQ13370 1112 aa22.76■■□□□ 1.23
CLN8-206ENST00000523237 TOM1L2Q6ZVM7 507 aa22.76■■□□□ 1.23
CLN8-206ENST00000523237 WDR17Q8IZU2 1322 aa22.76■■□□□ 1.23
CLN8-206ENST00000523237 TNS1Q9HBL0 1735 aaKnown RBP22.75■■□□□ 1.23
CLN8-206ENST00000523237 FAM196AQ6ZSG2 479 aa22.75■■□□□ 1.23
CLN8-206ENST00000523237 WNK3Q9BYP7 1800 aa22.75■■□□□ 1.23
CLN8-206ENST00000523237 CSB-PGBD3P0DP91 1061 aa22.72■■□□□ 1.23
CLN8-206ENST00000523237 CDCA8Q53HL2 280 aa22.72■■□□□ 1.23
CLN8-206ENST00000523237 CCER1Q8TC90 406 aaPredicted RBP22.72■■□□□ 1.23
CLN8-206ENST00000523237 ANKRD36BQ8N2N9 1353 aa22.71■■□□□ 1.23
CLN8-206ENST00000523237 OVOS2A0A0J9YW53 1432 aa22.71■■□□□ 1.23
CLN8-206ENST00000523237 OVOS2Q6IE36 1432 aa22.71■■□□□ 1.23
CLN8-206ENST00000523237 LRRC37A3O60309 1634 aa22.71■■□□□ 1.23
CLN8-206ENST00000523237 DISP2A7MBM2 1401 aa22.68■■□□□ 1.22
CLN8-206ENST00000523237 TRIM37O94972 964 aa22.68■■□□□ 1.22
CLN8-206ENST00000523237 CARD10Q9BWT7 1032 aa22.68■■□□□ 1.22
CLN8-206ENST00000523237 CDCA7Q9BWT1 371 aaPredicted RBP22.67■■□□□ 1.22
CLN8-206ENST00000523237 C11orf95C9JLR9 678 aaPredicted RBP22.66■■□□□ 1.22
CLN8-206ENST00000523237 EN1Q05925 392 aaPredicted RBP22.66■■□□□ 1.22
CLN8-206ENST00000523237 DDB1Q16531 1140 aa22.66■■□□□ 1.22
CLN8-206ENST00000523237 CCDC7Q96M83 1385 aa22.65■■□□□ 1.22
CLN8-206ENST00000523237 COG3Q96JB2 828 aa22.65■■□□□ 1.22
CLN8-206ENST00000523237 OVOS2A0A0G2JMS6 1433 aa22.65■■□□□ 1.22
CLN8-206ENST00000523237 ERBB3P21860 1342 aa22.64■■□□□ 1.22
CLN8-206ENST00000523237 PEAK1Q9H792 1746 aa22.64■■□□□ 1.21
CLN8-206ENST00000523237 MYOM1P52179 1685 aa22.63■■□□□ 1.21
CLN8-206ENST00000523237 SBF2Q86WG5 1849 aa22.62■■□□□ 1.21
CLN8-206ENST00000523237 APBA3O96018 575 aa22.62■■□□□ 1.21
CLN8-206ENST00000523237 KIF20BQ96Q89 1820 aa22.61■■□□□ 1.21
CLN8-206ENST00000523237 ANKRD24Q8TF21 1146 aa22.6■■□□□ 1.21
CLN8-206ENST00000523237 NLRP2Q9NX02 1062 aa22.6■■□□□ 1.21
CLN8-206ENST00000523237 FAM208AQ9UK61 1670 aaKnown RBP22.6■■□□□ 1.21
CLN8-206ENST00000523237 PARD3Q8TEW0 1356 aa22.6■■□□□ 1.21
CLN8-206ENST00000523237 EZH2Q15910 746 aaKnown RBP22.59■■□□□ 1.21
CLN8-206ENST00000523237 IP6K1Q92551 441 aa22.58■■□□□ 1.21
CLN8-206ENST00000523237 CAMKK2Q96RR4 588 aa22.58■■□□□ 1.21
CLN8-206ENST00000523237 EXOC5O00471 708 aa22.57■■□□□ 1.2
CLN8-206ENST00000523237 FYB1O15117 783 aa22.57■■□□□ 1.2
CLN8-206ENST00000523237 RREB1Q92766 1687 aa22.56■■□□□ 1.2
CLN8-206ENST00000523237 GGNBP2Q9H3C7 697 aa22.56■■□□□ 1.2
CLN8-206ENST00000523237 MAP3K19Q56UN5 1328 aa22.56■■□□□ 1.2
CLN8-206ENST00000523237 AMPHP49418 695 aa22.55■■□□□ 1.2
CLN8-206ENST00000523237 EIF4G2P78344 907 aaKnown RBP eCLIP22.55■■□□□ 1.2
CLN8-206ENST00000523237 MARCH10Q8NA82 808 aaPredicted RBP22.55■■□□□ 1.2
CLN8-206ENST00000523237 TNS2Q63HR2 1409 aa22.55■■□□□ 1.2
CLN8-206ENST00000523237 BCL9O00512 1426 aa22.54■■□□□ 1.2
CLN8-206ENST00000523237 IL2RBP14784 551 aa22.53■■□□□ 1.2
CLN8-206ENST00000523237 HOXC9P31274 260 aa22.53■■□□□ 1.2
CLN8-206ENST00000523237 RGPD3A6NKT7 1758 aaPredicted RBP22.53■■□□□ 1.2
CLN8-206ENST00000523237 RGPD4Q7Z3J3 1758 aa22.53■■□□□ 1.2
CLN8-206ENST00000523237 RTL1A6NKG5 1358 aa22.52■■□□□ 1.2
CLN8-206ENST00000523237 NUP188Q5SRE5 1749 aa22.52■■□□□ 1.2
CLN8-206ENST00000523237 NSD3Q9BZ95 1437 aa22.52■■□□□ 1.2
CLN8-206ENST00000523237 PSDA5PKW4 1024 aaPredicted RBP22.52■■□□□ 1.2
CLN8-206ENST00000523237 FBLN1P23142 703 aa22.52■■□□□ 1.2
CLN8-206ENST00000523237 LTV1Q96GA3 475 aaPredicted RBP22.52■■□□□ 1.2
CLN8-206ENST00000523237 CARD14Q9BXL6 1004 aa22.51■■□□□ 1.19
CLN8-206ENST00000523237 HSPA5P11021 654 aaKnown RBP22.5■■□□□ 1.19
CLN8-206ENST00000523237 BCL11BQ9C0K0 894 aaPredicted RBP22.5■■□□□ 1.19
CLN8-206ENST00000523237 RGPD2P0DJD1 1756 aa22.49■■□□□ 1.19
CLN8-206ENST00000523237 RRS1Q15050 365 aaKnown RBP22.49■■□□□ 1.19
CLN8-206ENST00000523237 POLR3GLQ9BT43 218 aa22.49■■□□□ 1.19
CLN8-206ENST00000523237 R3HDM1Q15032 1099 aaKnown RBP22.48■■□□□ 1.19
CLN8-206ENST00000523237 LRP5O75197 1615 aa22.48■■□□□ 1.19
CLN8-206ENST00000523237 PLSCR1O15162 318 aa22.47■■□□□ 1.19
CLN8-206ENST00000523237 SRCAPQ6ZRS2 3230 aa22.46■■□□□ 1.19
CLN8-206ENST00000523237 NBPF14Q5TI25 921 aa22.45■■□□□ 1.18
CLN8-206ENST00000523237 SMG6Q86US8 1419 aaKnown RBP22.45■■□□□ 1.18
CLN8-206ENST00000523237 NHSQ6T4R5 1651 aa22.45■■□□□ 1.18
CLN8-206ENST00000523237 CGNL1Q0VF96 1302 aa22.44■■□□□ 1.18
CLN8-206ENST00000523237 KIF24Q5T7B8 1368 aa22.44■■□□□ 1.18
CLN8-206ENST00000523237 PTF1AQ7RTS3 328 aa22.44■■□□□ 1.18
CLN8-206ENST00000523237 FLT4P35916 1363 aa22.42■■□□□ 1.18
CLN8-206ENST00000523237 ANKRD26Q9UPS8 1709 aa22.42■■□□□ 1.18
CLN8-206ENST00000523237 INSRP06213 1382 aa22.41■■□□□ 1.18
CLN8-206ENST00000523237 KAT6BQ8WYB5 2073 aa22.41■■□□□ 1.18
CLN8-206ENST00000523237 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
CLN8-206ENST00000523237 HSP90AB2PQ58FF8 381 aa22.39■■□□□ 1.17
CLN8-206ENST00000523237 ACSBG1Q96GR2 724 aa22.39■■□□□ 1.17
CLN8-206ENST00000523237 KCNQ2O43526 872 aa22.38■■□□□ 1.17
CLN8-206ENST00000523237 NBPF6Q5VWK0 638 aa22.38■■□□□ 1.17
CLN8-206ENST00000523237 NBPF4Q96M43 638 aa22.38■■□□□ 1.17
CLN8-206ENST00000523237 SHANK3Q9BYB0 1731 aa22.37■■□□□ 1.17
CLN8-206ENST00000523237 BTAF1O14981 1849 aa22.37■■□□□ 1.17
CLN8-206ENST00000523237 DDX54Q8TDD1 881 aaKnown RBP22.37■■□□□ 1.17
CLN8-206ENST00000523237 MEGF6O75095 1541 aa22.36■■□□□ 1.17
CLN8-206ENST00000523237 EMILIN1Q9Y6C2 1016 aa22.36■■□□□ 1.17
CLN8-206ENST00000523237 PANK3Q9H999 370 aa22.35■■□□□ 1.17
CLN8-206ENST00000523237 PPM1GO15355 546 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms