RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 LRRC37A3O60309 1634 aa11.3□□□□□ -0.6
GM2A-202ENST00000523004 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
GM2A-202ENST00000523004 ROCK2O75116 1388 aaKnown RBP11.29□□□□□ -0.6
GM2A-202ENST00000523004 RGPD5Q99666 1765 aa11.29□□□□□ -0.6
GM2A-202ENST00000523004 CPSF1Q10570 1443 aaKnown RBP11.29□□□□□ -0.6
GM2A-202ENST00000523004 PLSCR1O15162 318 aa11.29□□□□□ -0.6
GM2A-202ENST00000523004 DDB1Q16531 1140 aa11.29□□□□□ -0.6
GM2A-202ENST00000523004 KCNH5Q8NCM2 988 aa11.29□□□□□ -0.6
GM2A-202ENST00000523004 TTC21AQ8NDW8 1320 aa11.29□□□□□ -0.6
GM2A-202ENST00000523004 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
GM2A-202ENST00000523004 RGPD4Q7Z3J3 1758 aa11.28□□□□□ -0.6
GM2A-202ENST00000523004 WNK3Q9BYP7 1800 aa11.28□□□□□ -0.6
GM2A-202ENST00000523004 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
GM2A-202ENST00000523004 CDCA7Q9BWT1 371 aaPredicted RBP11.28□□□□□ -0.6
GM2A-202ENST00000523004 BCL9O00512 1426 aa11.27□□□□□ -0.6
GM2A-202ENST00000523004 NEUROD1Q13562 356 aa11.27□□□□□ -0.61
GM2A-202ENST00000523004 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.61
GM2A-202ENST00000523004 CARD10Q9BWT7 1032 aa11.27□□□□□ -0.61
GM2A-202ENST00000523004 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.61
GM2A-202ENST00000523004 NFAT5O94916 1531 aa11.26□□□□□ -0.61
GM2A-202ENST00000523004 PTF1AQ7RTS3 328 aa11.26□□□□□ -0.61
GM2A-202ENST00000523004 KTN1Q86UP2 1357 aaKnown RBP11.26□□□□□ -0.61
GM2A-202ENST00000523004 SBNO2Q9Y2G9 1366 aa11.26□□□□□ -0.61
GM2A-202ENST00000523004 SOX12O15370 315 aa11.25□□□□□ -0.61
GM2A-202ENST00000523004 KCNQ2O43526 872 aa11.25□□□□□ -0.61
GM2A-202ENST00000523004 SPON1Q9HCB6 807 aa11.25□□□□□ -0.61
GM2A-202ENST00000523004 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
GM2A-202ENST00000523004 ABCC6O95255 1503 aa11.25□□□□□ -0.61
GM2A-202ENST00000523004 CSB-PGBD3P0DP91 1061 aa11.24□□□□□ -0.61
GM2A-202ENST00000523004 PROM2Q8N271 834 aa11.24□□□□□ -0.61
GM2A-202ENST00000523004 USP31Q70CQ4 1352 aa11.24□□□□□ -0.61
GM2A-202ENST00000523004 EXOC5O00471 708 aa11.23□□□□□ -0.61
GM2A-202ENST00000523004 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
GM2A-202ENST00000523004 CCDC7Q96M83 1385 aa11.23□□□□□ -0.61
GM2A-202ENST00000523004 USP54Q70EL1 1684 aa11.23□□□□□ -0.61
GM2A-202ENST00000523004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.22□□□□□ -0.61
GM2A-202ENST00000523004 PCGF6Q9BYE7 350 aa11.22□□□□□ -0.61
GM2A-202ENST00000523004 CD163L1Q9NR16 1453 aa11.22□□□□□ -0.61
GM2A-202ENST00000523004 CASZ1Q86V15 1759 aa11.21□□□□□ -0.61
GM2A-202ENST00000523004 TNS2Q63HR2 1409 aa11.21□□□□□ -0.61
GM2A-202ENST00000523004 CARD11Q9BXL7 1154 aa11.21□□□□□ -0.61
GM2A-202ENST00000523004 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.61
GM2A-202ENST00000523004 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.62
GM2A-202ENST00000523004 NINLQ9Y2I6 1382 aa11.2□□□□□ -0.62
GM2A-202ENST00000523004 ERBB3P21860 1342 aa11.2□□□□□ -0.62
GM2A-202ENST00000523004 TXNRD1Q16881 649 aa11.2□□□□□ -0.62
GM2A-202ENST00000523004 NME9Q86XW9 330 aa11.2□□□□□ -0.62
GM2A-202ENST00000523004 PDGFDQ9GZP0 370 aaPredicted RBP11.2□□□□□ -0.62
GM2A-202ENST00000523004 LTN1O94822 1766 aa11.2□□□□□ -0.62
GM2A-202ENST00000523004 HDGFL2Q7Z4V5 671 aaPredicted RBP11.19□□□□□ -0.62
GM2A-202ENST00000523004 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
GM2A-202ENST00000523004 SLC12A5Q9H2X9 1139 aa11.19□□□□□ -0.62
GM2A-202ENST00000523004 EDC4Q6P2E9 1401 aaKnown RBP11.18□□□□□ -0.62
GM2A-202ENST00000523004 TMC1Q8TDI8 760 aa11.18□□□□□ -0.62
GM2A-202ENST00000523004 NLRP2Q9NX02 1062 aa11.18□□□□□ -0.62
GM2A-202ENST00000523004 NHSQ6T4R5 1651 aa11.17□□□□□ -0.62
GM2A-202ENST00000523004 IL2RBP14784 551 aa11.17□□□□□ -0.62
GM2A-202ENST00000523004 YY1P25490 414 aa11.17□□□□□ -0.62
GM2A-202ENST00000523004 PTGER2P43116 358 aa11.17□□□□□ -0.62
GM2A-202ENST00000523004 SLC15A2Q16348 729 aa11.17□□□□□ -0.62
GM2A-202ENST00000523004 ANKRD24Q8TF21 1146 aa11.17□□□□□ -0.62
GM2A-202ENST00000523004 STK32BQ9NY57 414 aa11.17□□□□□ -0.62
GM2A-202ENST00000523004 TERF2IPQ9NYB0 399 aa11.17□□□□□ -0.62
GM2A-202ENST00000523004 A0A1W2PP64 1363 aa11.16□□□□□ -0.62
GM2A-202ENST00000523004 ZBTB7AO95365 584 aa11.16□□□□□ -0.62
GM2A-202ENST00000523004 UTRNP46939 3433 aa11.16□□□□□ -0.62
GM2A-202ENST00000523004 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
GM2A-202ENST00000523004 BTAF1O14981 1849 aa11.15□□□□□ -0.62
GM2A-202ENST00000523004 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
GM2A-202ENST00000523004 ACSBG1Q96GR2 724 aa11.15□□□□□ -0.62
GM2A-202ENST00000523004 TESK2Q96S53 571 aa11.15□□□□□ -0.62
GM2A-202ENST00000523004 IP6K1Q92551 441 aa11.14□□□□□ -0.63
GM2A-202ENST00000523004 ATF5Q9Y2D1 282 aaPredicted RBP11.14□□□□□ -0.63
GM2A-202ENST00000523004 MYOM1P52179 1685 aa11.14□□□□□ -0.63
GM2A-202ENST00000523004 PAPPAQ13219 1627 aa11.13□□□□□ -0.63
GM2A-202ENST00000523004 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
GM2A-202ENST00000523004 MTFR1LQ9H019 292 aa11.13□□□□□ -0.63
GM2A-202ENST00000523004 FAM208AQ9UK61 1670 aaKnown RBP11.12□□□□□ -0.63
GM2A-202ENST00000523004 ST20-MTHFSA0A0A6YYL1 179 aa11.12□□□□□ -0.63
GM2A-202ENST00000523004 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
GM2A-202ENST00000523004 COG3Q96JB2 828 aa11.11□□□□□ -0.63
GM2A-202ENST00000523004 SYT17Q9BSW7 474 aa11.11□□□□□ -0.63
GM2A-202ENST00000523004 LRRC4BQ9NT99 713 aa11.11□□□□□ -0.63
GM2A-202ENST00000523004 MAP3K19Q56UN5 1328 aa11.1□□□□□ -0.63
GM2A-202ENST00000523004 HOXC9P31274 260 aa11.1□□□□□ -0.63
GM2A-202ENST00000523004 FHDC1Q9C0D6 1143 aaPredicted RBP11.1□□□□□ -0.63
GM2A-202ENST00000523004 RGPD2P0DJD1 1756 aa11.09□□□□□ -0.63
GM2A-202ENST00000523004 FBLN1P23142 703 aa11.09□□□□□ -0.63
GM2A-202ENST00000523004 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
GM2A-202ENST00000523004 SLC27A3Q5K4L6 730 aa11.09□□□□□ -0.63
GM2A-202ENST00000523004 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
GM2A-202ENST00000523004 LTV1Q96GA3 475 aaPredicted RBP11.09□□□□□ -0.63
GM2A-202ENST00000523004 CHD4Q14839 1912 aa11.08□□□□□ -0.64
GM2A-202ENST00000523004 ANKRD36BQ8N2N9 1353 aa11.08□□□□□ -0.64
GM2A-202ENST00000523004 AMPHP49418 695 aa11.08□□□□□ -0.64
GM2A-202ENST00000523004 AKT1S1Q96B36 256 aa11.08□□□□□ -0.64
GM2A-202ENST00000523004 ARXQ96QS3 562 aa11.08□□□□□ -0.64
GM2A-202ENST00000523004 QSER1Q2KHR3 1735 aa11.07□□□□□ -0.64
GM2A-202ENST00000523004 SHANK3Q9BYB0 1731 aa11.07□□□□□ -0.64
GM2A-202ENST00000523004 MAP3K5Q99683 1374 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms