RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 FBXO45P0C2W1 286 aa9.42□□□□□ -0.9
HMGB1P1-201ENST00000522557 ITPKCQ96DU7 683 aa9.42□□□□□ -0.9
HMGB1P1-201ENST00000522557 KCTD15Q96SI1 283 aaPredicted RBP9.42□□□□□ -0.9
HMGB1P1-201ENST00000522557 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
HMGB1P1-201ENST00000522557 ZIC2O95409 532 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P1-201ENST00000522557 BMP1P13497 986 aa9.41□□□□□ -0.9
HMGB1P1-201ENST00000522557 TRIM46Q7Z4K8 759 aa9.41□□□□□ -0.9
HMGB1P1-201ENST00000522557 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
HMGB1P1-201ENST00000522557 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
HMGB1P1-201ENST00000522557 TBC1D2BQ9UPU7 963 aa9.4□□□□□ -0.9
HMGB1P1-201ENST00000522557 CCDC116Q8IYX3 515 aa9.39□□□□□ -0.91
HMGB1P1-201ENST00000522557 CDV3Q9UKY7 258 aaKnown RBP9.39□□□□□ -0.91
HMGB1P1-201ENST00000522557 C11orf95C9JLR9 678 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P1-201ENST00000522557 APBB1O00213 710 aa9.38□□□□□ -0.91
HMGB1P1-201ENST00000522557 INTS6LQ5JSJ4 861 aaKnown RBP9.38□□□□□ -0.91
HMGB1P1-201ENST00000522557 SNRPBP14678 240 aaKnown RBP9.37□□□□□ -0.91
HMGB1P1-201ENST00000522557 RAB15P59190 212 aa9.37□□□□□ -0.91
HMGB1P1-201ENST00000522557 NR1H3Q13133 447 aa9.37□□□□□ -0.91
HMGB1P1-201ENST00000522557 PPP1R26Q5T8A7 1209 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P1-201ENST00000522557 PCDHB9Q9Y5E1 797 aa9.37□□□□□ -0.91
HMGB1P1-201ENST00000522557 MCM6Q14566 821 aa9.36□□□□□ -0.91
HMGB1P1-201ENST00000522557 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
HMGB1P1-201ENST00000522557 EMILIN1Q9Y6C2 1016 aa9.36□□□□□ -0.91
HMGB1P1-201ENST00000522557 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
HMGB1P1-201ENST00000522557 ZMYND15Q9H091 742 aa9.35□□□□□ -0.91
HMGB1P1-201ENST00000522557 ESPNB1AK53 854 aa9.34□□□□□ -0.91
HMGB1P1-201ENST00000522557 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P1-201ENST00000522557 IRF5Q13568 498 aa9.34□□□□□ -0.91
HMGB1P1-201ENST00000522557 NBPF20Q3BBV1 942 aa9.34□□□□□ -0.91
HMGB1P1-201ENST00000522557 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
HMGB1P1-201ENST00000522557 ZFP42Q96MM3 310 aa9.34□□□□□ -0.91
HMGB1P1-201ENST00000522557 SENP2Q9HC62 589 aa9.34□□□□□ -0.91
HMGB1P1-201ENST00000522557 TMPRSS4Q9NRS4 437 aa9.34□□□□□ -0.91
HMGB1P1-201ENST00000522557 CBLBQ13191 982 aa9.33□□□□□ -0.92
HMGB1P1-201ENST00000522557 PURBQ96QR8 312 aaKnown RBP9.33□□□□□ -0.92
HMGB1P1-201ENST00000522557 PRM3Q9NNZ6 103 aa9.33□□□□□ -0.92
HMGB1P1-201ENST00000522557 ERVH48-1M5A8F1 160 aa9.32□□□□□ -0.92
HMGB1P1-201ENST00000522557 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
HMGB1P1-201ENST00000522557 ZNF775Q96BV0 537 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P1-201ENST00000522557 PGPEP1Q9NXJ5 209 aa9.32□□□□□ -0.92
HMGB1P1-201ENST00000522557 ABL2P42684 1182 aa9.31□□□□□ -0.92
HMGB1P1-201ENST00000522557 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
HMGB1P1-201ENST00000522557 SUPT5HO00267 1087 aaKnown RBP9.3□□□□□ -0.92
HMGB1P1-201ENST00000522557 FLIIQ13045 1269 aa9.3□□□□□ -0.92
HMGB1P1-201ENST00000522557 SCARF1Q14162 830 aa9.3□□□□□ -0.92
HMGB1P1-201ENST00000522557 MEIOBQ8N635 442 aa9.3□□□□□ -0.92
HMGB1P1-201ENST00000522557 KIFC2Q96AC6 838 aa9.3□□□□□ -0.92
HMGB1P1-201ENST00000522557 POM121Q96HA1 1249 aa9.29□□□□□ -0.92
HMGB1P1-201ENST00000522557 COG6Q9Y2V7 657 aa9.29□□□□□ -0.92
HMGB1P1-201ENST00000522557 ADD1P35611 737 aaKnown RBP9.28□□□□□ -0.92
HMGB1P1-201ENST00000522557 VAC14Q08AM6 782 aa9.28□□□□□ -0.92
HMGB1P1-201ENST00000522557 Q6ZVU0 165 aa9.28□□□□□ -0.92
HMGB1P1-201ENST00000522557 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
HMGB1P1-201ENST00000522557 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P1-201ENST00000522557 C1orf115Q9H7X2 142 aa9.28□□□□□ -0.92
HMGB1P1-201ENST00000522557 ZNF330Q9Y3S2 320 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P1-201ENST00000522557 LILRA1O75019 489 aa9.27□□□□□ -0.93
HMGB1P1-201ENST00000522557 BMP2P12643 396 aa9.27□□□□□ -0.93
HMGB1P1-201ENST00000522557 MCCD1P59942 119 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P1-201ENST00000522557 SEPT12Q8IYM1 358 aa9.27□□□□□ -0.93
HMGB1P1-201ENST00000522557 AGBL1Q96MI9 1066 aa9.27□□□□□ -0.93
HMGB1P1-201ENST00000522557 SOBPA7XYQ1 873 aa9.26□□□□□ -0.93
HMGB1P1-201ENST00000522557 UPP2O95045 317 aa9.26□□□□□ -0.93
HMGB1P1-201ENST00000522557 TSEN34Q9BSV6 310 aaKnown RBP9.26□□□□□ -0.93
HMGB1P1-201ENST00000522557 CEP126Q9P2H0 1117 aa9.26□□□□□ -0.93
HMGB1P1-201ENST00000522557 CYLDQ9NQC7 956 aa9.25□□□□□ -0.93
HMGB1P1-201ENST00000522557 A6NJR5 290 aa9.24□□□□□ -0.93
HMGB1P1-201ENST00000522557 RELBQ01201 579 aa9.24□□□□□ -0.93
HMGB1P1-201ENST00000522557 EIF4G2P78344 907 aaKnown RBP eCLIP9.23□□□□□ -0.93
HMGB1P1-201ENST00000522557 WASHC4Q2M389 1173 aa9.22□□□□□ -0.93
HMGB1P1-201ENST00000522557 TSGA10IPQ3SY00 556 aa9.22□□□□□ -0.93
HMGB1P1-201ENST00000522557 RNF20Q5VTR2 975 aa9.22□□□□□ -0.93
HMGB1P1-201ENST00000522557 HOMEZQ8IX15 550 aa9.22□□□□□ -0.93
HMGB1P1-201ENST00000522557 KDF1Q8NAX2 398 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P1-201ENST00000522557 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
HMGB1P1-201ENST00000522557 ZNF395Q9H8N7 513 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P1-201ENST00000522557 UBTFP17480 764 aaKnown RBP9.21□□□□□ -0.94
HMGB1P1-201ENST00000522557 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P1-201ENST00000522557 PCDHB11Q9Y5F2 797 aa9.21□□□□□ -0.94
HMGB1P1-201ENST00000522557 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P1-201ENST00000522557 SPINT1O43278 529 aa9.2□□□□□ -0.94
HMGB1P1-201ENST00000522557 RAD21O60216 631 aa9.2□□□□□ -0.94
HMGB1P1-201ENST00000522557 ADH1AP07327 375 aa9.2□□□□□ -0.94
HMGB1P1-201ENST00000522557 SCTRP47872 440 aa9.2□□□□□ -0.94
HMGB1P1-201ENST00000522557 PHTF2Q8N3S3 785 aa9.2□□□□□ -0.94
HMGB1P1-201ENST00000522557 CDCA7Q9BWT1 371 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P1-201ENST00000522557 FIGNL2A6NMB9 653 aa9.19□□□□□ -0.94
HMGB1P1-201ENST00000522557 MAN1A2O60476 641 aa9.19□□□□□ -0.94
HMGB1P1-201ENST00000522557 CCDC125Q86Z20 511 aa9.19□□□□□ -0.94
HMGB1P1-201ENST00000522557 INSM2Q96T92 566 aaPredicted RBP9.19□□□□□ -0.94
HMGB1P1-201ENST00000522557 PTGIRP43119 386 aa9.18□□□□□ -0.94
HMGB1P1-201ENST00000522557 CTSOP43234 321 aaPredicted RBP9.18□□□□□ -0.94
HMGB1P1-201ENST00000522557 ERVK-9P63128 1117 aa9.18□□□□□ -0.94
HMGB1P1-201ENST00000522557 CC2D2BQ6DHV5 1058 aa9.18□□□□□ -0.94
HMGB1P1-201ENST00000522557 FNBP4Q8N3X1 1017 aaPredicted RBP9.18□□□□□ -0.94
HMGB1P1-201ENST00000522557 DNMT3LQ9UJW3 386 aa9.18□□□□□ -0.94
HMGB1P1-201ENST00000522557 TTLL8A6PVC2 850 aa9.17□□□□□ -0.94
HMGB1P1-201ENST00000522557 TERTO14746 1132 aaKnown RBP9.17□□□□□ -0.94
HMGB1P1-201ENST00000522557 NFX1Q12986 1120 aaKnown RBP9.17□□□□□ -0.94
HMGB1P1-201ENST00000522557 SEMA3FQ13275 785 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms