RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SPATA31A1Q5TZJ5 1347 aa24.87■■□□□ 1.57
CLK4-211ENST00000522556 KCNH5Q8NCM2 988 aa24.87■■□□□ 1.57
CLK4-211ENST00000522556 UPF1Q92900 1129 aaKnown RBP eCLIP24.87■■□□□ 1.57
CLK4-211ENST00000522556 NSD3Q9BZ95 1437 aa24.86■■□□□ 1.57
CLK4-211ENST00000522556 FBLN1P23142 703 aa24.86■■□□□ 1.57
CLK4-211ENST00000522556 USP35Q9P2H5 1018 aa24.86■■□□□ 1.57
CLK4-211ENST00000522556 ONECUT3O60422 494 aaPredicted RBP24.85■■□□□ 1.57
CLK4-211ENST00000522556 EVA1CP58658 441 aa24.84■■□□□ 1.57
CLK4-211ENST00000522556 GGNBP2Q9H3C7 697 aa24.84■■□□□ 1.57
CLK4-211ENST00000522556 A0A0G2JS52 829 aa24.83■■□□□ 1.57
CLK4-211ENST00000522556 FYB1O15117 783 aa24.83■■□□□ 1.57
CLK4-211ENST00000522556 MYT1Q01538 1121 aa24.83■■□□□ 1.57
CLK4-211ENST00000522556 WNK3Q9BYP7 1800 aa24.82■■□□□ 1.56
CLK4-211ENST00000522556 ABCC6O95255 1503 aa24.81■■□□□ 1.56
CLK4-211ENST00000522556 EP400Q96L91 3159 aa24.81■■□□□ 1.56
CLK4-211ENST00000522556 CRB1P82279 1406 aa24.8■■□□□ 1.56
CLK4-211ENST00000522556 COG3Q96JB2 828 aa24.79■■□□□ 1.56
CLK4-211ENST00000522556 KIF7Q2M1P5 1343 aa24.78■■□□□ 1.56
CLK4-211ENST00000522556 FAM182BQ5T319 152 aa24.77■■□□□ 1.56
CLK4-211ENST00000522556 WDR17Q8IZU2 1322 aa24.77■■□□□ 1.56
CLK4-211ENST00000522556 PEAK1Q9H792 1746 aa24.76■■□□□ 1.55
CLK4-211ENST00000522556 LRRC37A3O60309 1634 aa24.75■■□□□ 1.55
CLK4-211ENST00000522556 PARP4Q9UKK3 1724 aaKnown RBP24.75■■□□□ 1.55
CLK4-211ENST00000522556 KRT27Q7Z3Y8 459 aa24.75■■□□□ 1.55
CLK4-211ENST00000522556 TCP11L2Q8N4U5 519 aa24.75■■□□□ 1.55
CLK4-211ENST00000522556 MAP3K19Q56UN5 1328 aa24.75■■□□□ 1.55
CLK4-211ENST00000522556 ANKRD26Q9UPS8 1709 aa24.75■■□□□ 1.55
CLK4-211ENST00000522556 TOM1L2Q6ZVM7 507 aa24.74■■□□□ 1.55
CLK4-211ENST00000522556 PANK3Q9H999 370 aa24.74■■□□□ 1.55
CLK4-211ENST00000522556 RGPD2P0DJD1 1756 aa24.73■■□□□ 1.55
CLK4-211ENST00000522556 RRS1Q15050 365 aaKnown RBP24.73■■□□□ 1.55
CLK4-211ENST00000522556 BARGINQ6ZT62 677 aa24.73■■□□□ 1.55
CLK4-211ENST00000522556 ERBB3P21860 1342 aa24.72■■□□□ 1.55
CLK4-211ENST00000522556 CSB-PGBD3P0DP91 1061 aa24.71■■□□□ 1.55
CLK4-211ENST00000522556 ANKRD24Q8TF21 1146 aa24.68■■□□□ 1.54
CLK4-211ENST00000522556 DISP2A7MBM2 1401 aa24.68■■□□□ 1.54
CLK4-211ENST00000522556 BLMP54132 1417 aaPredicted RBP24.68■■□□□ 1.54
CLK4-211ENST00000522556 CGNL1Q0VF96 1302 aa24.67■■□□□ 1.54
CLK4-211ENST00000522556 HOXC9P31274 260 aa24.67■■□□□ 1.54
CLK4-211ENST00000522556 IP6K1Q92551 441 aa24.67■■□□□ 1.54
CLK4-211ENST00000522556 LTV1Q96GA3 475 aaPredicted RBP24.67■■□□□ 1.54
CLK4-211ENST00000522556 THRAP3Q9Y2W1 955 aaKnown RBP24.66■■□□□ 1.54
CLK4-211ENST00000522556 CCDC7Q96M83 1385 aa24.66■■□□□ 1.54
CLK4-211ENST00000522556 FAM208AQ9UK61 1670 aaKnown RBP24.66■■□□□ 1.54
CLK4-211ENST00000522556 WASHC2AQ641Q2 1341 aa24.65■■□□□ 1.54
CLK4-211ENST00000522556 CARD10Q9BWT7 1032 aa24.65■■□□□ 1.54
CLK4-211ENST00000522556 MAP2P11137 1827 aaKnown RBP24.65■■□□□ 1.54
CLK4-211ENST00000522556 TNS1Q9HBL0 1735 aaKnown RBP24.64■■□□□ 1.54
CLK4-211ENST00000522556 AMPHP49418 695 aa24.64■■□□□ 1.54
CLK4-211ENST00000522556 EMILIN1Q9Y6C2 1016 aa24.64■■□□□ 1.54
CLK4-211ENST00000522556 NLRP2Q9NX02 1062 aa24.63■■□□□ 1.53
CLK4-211ENST00000522556 RTL1A6NKG5 1358 aa24.63■■□□□ 1.53
CLK4-211ENST00000522556 RGPD1P0DJD0 1748 aa24.6■■□□□ 1.53
CLK4-211ENST00000522556 TNNT2P45379 298 aaPredicted RBP24.59■■□□□ 1.53
CLK4-211ENST00000522556 HSP90AB2PQ58FF8 381 aa24.59■■□□□ 1.53
CLK4-211ENST00000522556 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
CLK4-211ENST00000522556 FLT4P35916 1363 aa24.57■■□□□ 1.52
CLK4-211ENST00000522556 PDE3BQ13370 1112 aa24.57■■□□□ 1.52
CLK4-211ENST00000522556 SBF2Q86WG5 1849 aa24.56■■□□□ 1.52
CLK4-211ENST00000522556 TNS2Q63HR2 1409 aa24.56■■□□□ 1.52
CLK4-211ENST00000522556 DDB1Q16531 1140 aa24.56■■□□□ 1.52
CLK4-211ENST00000522556 INSRP06213 1382 aa24.54■■□□□ 1.52
CLK4-211ENST00000522556 PPM1GO15355 546 aaPredicted RBP24.54■■□□□ 1.52
CLK4-211ENST00000522556 AMER1Q5JTC6 1135 aaPredicted RBP24.54■■□□□ 1.52
CLK4-211ENST00000522556 USHBP1Q8N6Y0 703 aa24.54■■□□□ 1.52
CLK4-211ENST00000522556 SHANK3Q9BYB0 1731 aa24.54■■□□□ 1.52
CLK4-211ENST00000522556 NSD2O96028 1365 aa24.54■■□□□ 1.52
CLK4-211ENST00000522556 MEGF6O75095 1541 aa24.53■■□□□ 1.52
CLK4-211ENST00000522556 TRIM37O94972 964 aa24.53■■□□□ 1.52
CLK4-211ENST00000522556 MARCH10Q8NA82 808 aaPredicted RBP24.53■■□□□ 1.52
CLK4-211ENST00000522556 POLKQ9UBT6 870 aa24.53■■□□□ 1.52
CLK4-211ENST00000522556 PER1O15534 1290 aaPredicted RBP24.52■■□□□ 1.52
CLK4-211ENST00000522556 NBPF6Q5VWK0 638 aa24.52■■□□□ 1.52
CLK4-211ENST00000522556 NBPF4Q96M43 638 aa24.52■■□□□ 1.52
CLK4-211ENST00000522556 KNSTRNQ9Y448 316 aa24.52■■□□□ 1.52
CLK4-211ENST00000522556 OVOS2A0A0G2JMS6 1433 aa24.52■■□□□ 1.52
CLK4-211ENST00000522556 IL2RBP14784 551 aa24.51■■□□□ 1.51
CLK4-211ENST00000522556 FAM196AQ6ZSG2 479 aa24.51■■□□□ 1.51
CLK4-211ENST00000522556 CCDC125Q86Z20 511 aa24.51■■□□□ 1.51
CLK4-211ENST00000522556 KIF24Q5T7B8 1368 aa24.51■■□□□ 1.51
CLK4-211ENST00000522556 CDCA7Q9BWT1 371 aaPredicted RBP24.5■■□□□ 1.51
CLK4-211ENST00000522556 PTF1AQ7RTS3 328 aa24.49■■□□□ 1.51
CLK4-211ENST00000522556 SMG6Q86US8 1419 aaKnown RBP24.49■■□□□ 1.51
CLK4-211ENST00000522556 MORC1Q86VD1 984 aa24.47■■□□□ 1.51
CLK4-211ENST00000522556 SF3B2Q13435 895 aaKnown RBP24.46■■□□□ 1.51
CLK4-211ENST00000522556 CNGB1Q14028 1251 aaPredicted RBP24.46■■□□□ 1.51
CLK4-211ENST00000522556 EXOC5O00471 708 aa24.45■■□□□ 1.5
CLK4-211ENST00000522556 EN1Q05925 392 aaPredicted RBP24.45■■□□□ 1.5
CLK4-211ENST00000522556 CC2D1BQ5T0F9 858 aaKnown RBP24.45■■□□□ 1.5
CLK4-211ENST00000522556 NCAPD2Q15021 1401 aa24.44■■□□□ 1.5
CLK4-211ENST00000522556 NHSQ6T4R5 1651 aa24.42■■□□□ 1.5
CLK4-211ENST00000522556 BAG6P46379 1132 aa24.41■■□□□ 1.5
CLK4-211ENST00000522556 EIF4A2Q14240 407 aaKnown RBP24.41■■□□□ 1.5
CLK4-211ENST00000522556 BCL9O00512 1426 aa24.41■■□□□ 1.5
CLK4-211ENST00000522556 RREB1Q92766 1687 aa24.4■■□□□ 1.5
CLK4-211ENST00000522556 PKD1L3Q7Z443 1732 aa24.39■■□□□ 1.5
CLK4-211ENST00000522556 DOT1LQ8TEK3 1739 aa24.39■■□□□ 1.5
CLK4-211ENST00000522556 APBA3O96018 575 aa24.39■■□□□ 1.49
CLK4-211ENST00000522556 EZH2Q15910 746 aaKnown RBP24.39■■□□□ 1.49
CLK4-211ENST00000522556 EYA1Q99502 592 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms