RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 PNMA1Q8ND90 353 aa12.01□□□□□ -0.49
SGCE-211ENST00000522045 CDV3Q9UKY7 258 aaKnown RBP12.01□□□□□ -0.49
SGCE-211ENST00000522045 USP17L8P0C7I0 530 aa12□□□□□ -0.49
SGCE-211ENST00000522045 LINC00528Q8N1L1 170 aa12□□□□□ -0.49
SGCE-211ENST00000522045 BMP2P12643 396 aa11.99□□□□□ -0.49
SGCE-211ENST00000522045 PTK2Q05397 1052 aa11.99□□□□□ -0.49
SGCE-211ENST00000522045 GOPCQ9HD26 462 aa11.99□□□□□ -0.49
SGCE-211ENST00000522045 RFC5P40937 340 aa11.98□□□□□ -0.49
SGCE-211ENST00000522045 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
SGCE-211ENST00000522045 IRF7Q92985 503 aa11.98□□□□□ -0.49
SGCE-211ENST00000522045 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
SGCE-211ENST00000522045 GPSM3Q9Y4H4 160 aa11.98□□□□□ -0.49
SGCE-211ENST00000522045 H3BM21 787 aa11.97□□□□□ -0.49
SGCE-211ENST00000522045 MAN1A2O60476 641 aa11.97□□□□□ -0.49
SGCE-211ENST00000522045 VEGFBP49765 207 aa11.97□□□□□ -0.49
SGCE-211ENST00000522045 SOBPA7XYQ1 873 aa11.96□□□□□ -0.49
SGCE-211ENST00000522045 KCTD15Q96SI1 283 aaPredicted RBP11.96□□□□□ -0.49
SGCE-211ENST00000522045 TSEN34Q9BSV6 310 aaKnown RBP11.96□□□□□ -0.49
SGCE-211ENST00000522045 HMX1Q9NP08 348 aaPredicted RBP11.96□□□□□ -0.49
SGCE-211ENST00000522045 PGPEP1Q9NXJ5 209 aa11.96□□□□□ -0.49
SGCE-211ENST00000522045 PPP1R26Q5T8A7 1209 aaPredicted RBP11.95□□□□□ -0.5
SGCE-211ENST00000522045 EPS8L1Q8TE68 723 aa11.95□□□□□ -0.5
SGCE-211ENST00000522045 ADAM32Q8TC27 787 aa11.94□□□□□ -0.5
SGCE-211ENST00000522045 DHX9Q08211 1270 aaKnown RBP11.93□□□□□ -0.5
SGCE-211ENST00000522045 OCSTAMPQ9BR26 566 aa11.93□□□□□ -0.5
SGCE-211ENST00000522045 STK17AQ9UEE5 414 aa11.93□□□□□ -0.5
SGCE-211ENST00000522045 GMPRP36959 345 aa11.91□□□□□ -0.5
SGCE-211ENST00000522045 NBPF20Q3BBV1 942 aa11.91□□□□□ -0.5
SGCE-211ENST00000522045 TMEM259Q4ZIN3 620 aa11.91□□□□□ -0.5
SGCE-211ENST00000522045 SOS2Q07890 1332 aaPredicted RBP11.9□□□□□ -0.5
SGCE-211ENST00000522045 INTS6LQ5JSJ4 861 aaKnown RBP11.9□□□□□ -0.5
SGCE-211ENST00000522045 IL27Q8NEV9 243 aa11.9□□□□□ -0.5
SGCE-211ENST00000522045 Q6ZVU0 165 aa11.89□□□□□ -0.51
SGCE-211ENST00000522045 ERBB4Q15303 1308 aa11.88□□□□□ -0.51
SGCE-211ENST00000522045 CBLBQ13191 982 aa11.88□□□□□ -0.51
SGCE-211ENST00000522045 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
SGCE-211ENST00000522045 DNMT3LQ9UJW3 386 aa11.87□□□□□ -0.51
SGCE-211ENST00000522045 TRIM34Q9BYJ4 488 aa11.86□□□□□ -0.51
SGCE-211ENST00000522045 TTLL8A6PVC2 850 aa11.85□□□□□ -0.51
SGCE-211ENST00000522045 BRPF1P55201 1214 aaPredicted RBP11.85□□□□□ -0.51
SGCE-211ENST00000522045 VSIG8P0DPA2 414 aa11.84□□□□□ -0.51
SGCE-211ENST00000522045 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.84□□□□□ -0.51
SGCE-211ENST00000522045 SPINT1O43278 529 aa11.83□□□□□ -0.52
SGCE-211ENST00000522045 PPFIA3O75145 1194 aa11.82□□□□□ -0.52
SGCE-211ENST00000522045 RAB15P59190 212 aa11.82□□□□□ -0.52
SGCE-211ENST00000522045 FAM181BA6NEQ2 426 aa11.81□□□□□ -0.52
SGCE-211ENST00000522045 ZSCAN1Q8NBB4 408 aa11.8□□□□□ -0.52
SGCE-211ENST00000522045 RELBQ01201 579 aa11.79□□□□□ -0.52
SGCE-211ENST00000522045 ZNF784Q8NCA9 323 aaPredicted RBP11.79□□□□□ -0.52
SGCE-211ENST00000522045 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
SGCE-211ENST00000522045 AGBL1Q96MI9 1066 aa11.79□□□□□ -0.52
SGCE-211ENST00000522045 TMPRSS4Q9NRS4 437 aa11.79□□□□□ -0.52
SGCE-211ENST00000522045 FIGNL2A6NMB9 653 aa11.78□□□□□ -0.52
SGCE-211ENST00000522045 ZBBXA8MT70 800 aa11.78□□□□□ -0.52
SGCE-211ENST00000522045 ESPNB1AK53 854 aa11.78□□□□□ -0.52
SGCE-211ENST00000522045 ERVH48-1M5A8F1 160 aa11.78□□□□□ -0.52
SGCE-211ENST00000522045 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
SGCE-211ENST00000522045 TRIM52Q96A61 297 aa11.77□□□□□ -0.53
SGCE-211ENST00000522045 ADH1AP07327 375 aa11.76□□□□□ -0.53
SGCE-211ENST00000522045 PTSQ03393 145 aa11.76□□□□□ -0.53
SGCE-211ENST00000522045 INSM2Q96T92 566 aaPredicted RBP11.75□□□□□ -0.53
SGCE-211ENST00000522045 POLMQ9NP87 494 aaPredicted RBP11.75□□□□□ -0.53
SGCE-211ENST00000522045 PCDHB9Q9Y5E1 797 aa11.75□□□□□ -0.53
SGCE-211ENST00000522045 FBXO45P0C2W1 286 aa11.74□□□□□ -0.53
SGCE-211ENST00000522045 LORP23490 312 aaPredicted RBP11.74□□□□□ -0.53
SGCE-211ENST00000522045 CTSOP43234 321 aaPredicted RBP11.74□□□□□ -0.53
SGCE-211ENST00000522045 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
SGCE-211ENST00000522045 LILRA1O75019 489 aa11.73□□□□□ -0.53
SGCE-211ENST00000522045 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
SGCE-211ENST00000522045 SOCS7O14512 581 aa11.72□□□□□ -0.53
SGCE-211ENST00000522045 ZNF395Q9H8N7 513 aaPredicted RBP11.72□□□□□ -0.53
SGCE-211ENST00000522045 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.53
SGCE-211ENST00000522045 APBB1O00213 710 aa11.7□□□□□ -0.54
SGCE-211ENST00000522045 PTGIRP43119 386 aa11.7□□□□□ -0.54
SGCE-211ENST00000522045 CCDC155Q8N6L0 562 aa11.7□□□□□ -0.54
SGCE-211ENST00000522045 RNF217Q8TC41 542 aa11.7□□□□□ -0.54
SGCE-211ENST00000522045 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
SGCE-211ENST00000522045 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
SGCE-211ENST00000522045 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
SGCE-211ENST00000522045 NR1H3Q13133 447 aa11.69□□□□□ -0.54
SGCE-211ENST00000522045 CCDC125Q86Z20 511 aa11.69□□□□□ -0.54
SGCE-211ENST00000522045 NDUFB9Q9Y6M9 179 aa11.69□□□□□ -0.54
SGCE-211ENST00000522045 SLC35F4A4IF30 521 aa11.68□□□□□ -0.54
SGCE-211ENST00000522045 MCCD1P59942 119 aaPredicted RBP11.68□□□□□ -0.54
SGCE-211ENST00000522045 MTMR14Q8NCE2 650 aa11.68□□□□□ -0.54
SGCE-211ENST00000522045 ZNF330Q9Y3S2 320 aaPredicted RBP11.68□□□□□ -0.54
SGCE-211ENST00000522045 RNF20Q5VTR2 975 aa11.67□□□□□ -0.54
SGCE-211ENST00000522045 KDF1Q8NAX2 398 aaPredicted RBP11.66□□□□□ -0.54
SGCE-211ENST00000522045 NANOS1Q8WY41 292 aaKnown RBP11.66□□□□□ -0.54
SGCE-211ENST00000522045 FOXD4L5Q5VV16 416 aaPredicted RBP11.65□□□□□ -0.54
SGCE-211ENST00000522045 ATP5J2-PTCD1G3V325 749 aa11.64□□□□□ -0.55
SGCE-211ENST00000522045 ITGA6P23229 1130 aa11.64□□□□□ -0.55
SGCE-211ENST00000522045 GPR37L1O60883 481 aa11.63□□□□□ -0.55
SGCE-211ENST00000522045 LYSMD3Q7Z3D4 306 aa11.63□□□□□ -0.55
SGCE-211ENST00000522045 GPR161Q8N6U8 529 aaKnown RBP11.63□□□□□ -0.55
SGCE-211ENST00000522045 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
SGCE-211ENST00000522045 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
SGCE-211ENST00000522045 CDC14CA4D256 554 aa11.61□□□□□ -0.55
SGCE-211ENST00000522045 ERVK-9P63128 1117 aa11.61□□□□□ -0.55
SGCE-211ENST00000522045 SENP3-EIF4A1A0A087X0R7 540 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms