RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LARP1Q6PKG0 1096 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-212ENST00000521944 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
TRAPPC9-212ENST00000521944 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
TRAPPC9-212ENST00000521944 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-212ENST00000521944 RGL3Q3MIN7 710 aa13.53□□□□□ -0.24
TRAPPC9-212ENST00000521944 PRAM1Q96QH2 718 aa13.53□□□□□ -0.24
TRAPPC9-212ENST00000521944 SSH2Q76I76 1423 aa13.53□□□□□ -0.24
TRAPPC9-212ENST00000521944 ANKARQ7Z5J8 1434 aa13.53□□□□□ -0.24
TRAPPC9-212ENST00000521944 ZC3H6P61129 1189 aaKnown RBP13.52□□□□□ -0.25
TRAPPC9-212ENST00000521944 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
TRAPPC9-212ENST00000521944 SPATA31E1Q6ZUB1 1445 aa13.52□□□□□ -0.25
TRAPPC9-212ENST00000521944 PEAK1Q9H792 1746 aa13.52□□□□□ -0.25
TRAPPC9-212ENST00000521944 GPRASP1Q5JY77 1395 aa13.51□□□□□ -0.25
TRAPPC9-212ENST00000521944 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-212ENST00000521944 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-212ENST00000521944 RGPD3A6NKT7 1758 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-212ENST00000521944 RGPD4Q7Z3J3 1758 aa13.5□□□□□ -0.25
TRAPPC9-212ENST00000521944 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
TRAPPC9-212ENST00000521944 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-212ENST00000521944 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
TRAPPC9-212ENST00000521944 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
TRAPPC9-212ENST00000521944 EVA1CP58658 441 aa13.48□□□□□ -0.25
TRAPPC9-212ENST00000521944 CFAP70Q5T0N1 1121 aa13.48□□□□□ -0.25
TRAPPC9-212ENST00000521944 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-212ENST00000521944 HIRIP3Q9BW71 556 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-212ENST00000521944 MTFR1LQ9H019 292 aa13.48□□□□□ -0.25
TRAPPC9-212ENST00000521944 DHX57Q6P158 1386 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-212ENST00000521944 MAP3K5Q99683 1374 aa13.47□□□□□ -0.25
TRAPPC9-212ENST00000521944 SLC15A2Q16348 729 aa13.47□□□□□ -0.25
TRAPPC9-212ENST00000521944 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
TRAPPC9-212ENST00000521944 DLC1Q96QB1 1528 aa13.47□□□□□ -0.25
TRAPPC9-212ENST00000521944 ARXQ96QS3 562 aa13.46□□□□□ -0.25
TRAPPC9-212ENST00000521944 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-212ENST00000521944 PARP4Q9UKK3 1724 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-212ENST00000521944 TXNRD1Q16881 649 aa13.45□□□□□ -0.26
TRAPPC9-212ENST00000521944 OVOS2A0A0G2JMS6 1433 aa13.45□□□□□ -0.26
TRAPPC9-212ENST00000521944 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
TRAPPC9-212ENST00000521944 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
TRAPPC9-212ENST00000521944 LMO7Q8WWI1 1683 aa13.44□□□□□ -0.26
TRAPPC9-212ENST00000521944 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-212ENST00000521944 C11orf95C9JLR9 678 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-212ENST00000521944 GPR162Q16538 588 aa13.44□□□□□ -0.26
TRAPPC9-212ENST00000521944 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-212ENST00000521944 SPOCK2Q92563 424 aa13.44□□□□□ -0.26
TRAPPC9-212ENST00000521944 MARCH10Q8NA82 808 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-212ENST00000521944 STK32BQ9NY57 414 aa13.43□□□□□ -0.26
TRAPPC9-212ENST00000521944 ATP7BP35670 1465 aa13.42□□□□□ -0.26
TRAPPC9-212ENST00000521944 POGKQ9P215 609 aa13.42□□□□□ -0.26
TRAPPC9-212ENST00000521944 CPDO75976 1380 aa13.42□□□□□ -0.26
TRAPPC9-212ENST00000521944 MINK1Q8N4C8 1332 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-212ENST00000521944 TULP4Q9NRJ4 1543 aa13.41□□□□□ -0.26
TRAPPC9-212ENST00000521944 WASLO00401 505 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-212ENST00000521944 FAM212AQ96EL1 285 aa13.41□□□□□ -0.26
TRAPPC9-212ENST00000521944 HSPA6P17066 643 aa13.4□□□□□ -0.26
TRAPPC9-212ENST00000521944 NUBP1P53384 320 aa13.4□□□□□ -0.26
TRAPPC9-212ENST00000521944 COL5A2P05997 1499 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-212ENST00000521944 BCL9O00512 1426 aa13.39□□□□□ -0.27
TRAPPC9-212ENST00000521944 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
TRAPPC9-212ENST00000521944 YBX3P16989 372 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRAPPC9-212ENST00000521944 DDB1Q16531 1140 aa13.38□□□□□ -0.27
TRAPPC9-212ENST00000521944 NLGN2Q8NFZ4 835 aa13.38□□□□□ -0.27
TRAPPC9-212ENST00000521944 USP19O94966 1318 aa13.38□□□□□ -0.27
TRAPPC9-212ENST00000521944 AATKQ6ZMQ8 1374 aa13.37□□□□□ -0.27
TRAPPC9-212ENST00000521944 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
TRAPPC9-212ENST00000521944 TRAK1Q9UPV9 953 aa13.37□□□□□ -0.27
TRAPPC9-212ENST00000521944 CRB1P82279 1406 aa13.37□□□□□ -0.27
TRAPPC9-212ENST00000521944 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
TRAPPC9-212ENST00000521944 ZNF827Q17R98 1081 aa13.36□□□□□ -0.27
TRAPPC9-212ENST00000521944 NUDT16Q96DE0 195 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-212ENST00000521944 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-212ENST00000521944 GCP02774 474 aa13.35□□□□□ -0.27
TRAPPC9-212ENST00000521944 CLCN6P51797 869 aa13.35□□□□□ -0.27
TRAPPC9-212ENST00000521944 PPARGC1BQ86YN6 1023 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-212ENST00000521944 ATP10DQ9P241 1426 aa13.35□□□□□ -0.27
TRAPPC9-212ENST00000521944 POLR3AO14802 1390 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-212ENST00000521944 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-212ENST00000521944 PCNTO95613 3336 aa13.34□□□□□ -0.27
TRAPPC9-212ENST00000521944 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-212ENST00000521944 PAPPAQ13219 1627 aa13.34□□□□□ -0.27
TRAPPC9-212ENST00000521944 GSE1Q14687 1217 aa13.33□□□□□ -0.28
TRAPPC9-212ENST00000521944 DNAJC5GQ8N7S2 189 aa13.33□□□□□ -0.28
TRAPPC9-212ENST00000521944 ABTB2Q8N961 1025 aa13.33□□□□□ -0.28
TRAPPC9-212ENST00000521944 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-212ENST00000521944 LRRC4BQ9NT99 713 aa13.33□□□□□ -0.28
TRAPPC9-212ENST00000521944 ACEP12821 1306 aa13.33□□□□□ -0.28
TRAPPC9-212ENST00000521944 EVX2Q03828 476 aa13.32□□□□□ -0.28
TRAPPC9-212ENST00000521944 SP7Q8TDD2 431 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-212ENST00000521944 AXIN2Q9Y2T1 843 aa13.32□□□□□ -0.28
TRAPPC9-212ENST00000521944 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
TRAPPC9-212ENST00000521944 COL24A1Q17RW2 1714 aa13.3□□□□□ -0.28
TRAPPC9-212ENST00000521944 PLEKHG3A1L390 1219 aa13.3□□□□□ -0.28
TRAPPC9-212ENST00000521944 COL13A1Q5TAT6 717 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-212ENST00000521944 TOM1L2Q6ZVM7 507 aa13.29□□□□□ -0.28
TRAPPC9-212ENST00000521944 MPHOSPH9Q99550 1183 aa13.29□□□□□ -0.28
TRAPPC9-212ENST00000521944 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-212ENST00000521944 ADCY9O60503 1353 aa13.29□□□□□ -0.28
TRAPPC9-212ENST00000521944 COL18A1P39060 1754 aa13.28□□□□□ -0.28
TRAPPC9-212ENST00000521944 GRIN3BO60391 1043 aa13.28□□□□□ -0.28
TRAPPC9-212ENST00000521944 CDK19Q9BWU1 502 aa13.28□□□□□ -0.28
TRAPPC9-212ENST00000521944 NLRP13Q86W25 1043 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms