RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 SYNMO15061 1565 aa9.16□□□□□ -0.94
CTNNA1-228ENST00000521640 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
CTNNA1-228ENST00000521640 C3orf80F5H4A9 247 aa9.16□□□□□ -0.94
CTNNA1-228ENST00000521640 PTGDRQ13258 359 aa9.16□□□□□ -0.94
CTNNA1-228ENST00000521640 SMYD5Q6GMV2 418 aa9.16□□□□□ -0.94
CTNNA1-228ENST00000521640 TESK2Q96S53 571 aa9.16□□□□□ -0.94
CTNNA1-228ENST00000521640 KIAA1468Q9P260 1216 aa9.16□□□□□ -0.94
CTNNA1-228ENST00000521640 INSRP06213 1382 aa9.15□□□□□ -0.94
CTNNA1-228ENST00000521640 PRSS12P56730 875 aa9.15□□□□□ -0.94
CTNNA1-228ENST00000521640 RALBP1Q15311 655 aa9.15□□□□□ -0.94
CTNNA1-228ENST00000521640 RGL3Q3MIN7 710 aa9.15□□□□□ -0.94
CTNNA1-228ENST00000521640 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
CTNNA1-228ENST00000521640 CDCA8Q53HL2 280 aa9.15□□□□□ -0.94
CTNNA1-228ENST00000521640 CDCA7LQ96GN5 454 aa9.15□□□□□ -0.94
CTNNA1-228ENST00000521640 ZFYVE9O95405 1425 aa9.14□□□□□ -0.95
CTNNA1-228ENST00000521640 GPR37O15354 613 aa9.14□□□□□ -0.95
CTNNA1-228ENST00000521640 TMF1P82094 1093 aa9.14□□□□□ -0.95
CTNNA1-228ENST00000521640 RABGEF1Q9UJ41 708 aa9.14□□□□□ -0.95
CTNNA1-228ENST00000521640 ARHGEF40Q8TER5 1519 aa9.14□□□□□ -0.95
CTNNA1-228ENST00000521640 PIK3C2GO75747 1445 aa9.14□□□□□ -0.95
CTNNA1-228ENST00000521640 BRD4O60885 1362 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-228ENST00000521640 UGGT1Q9NYU2 1555 aa9.13□□□□□ -0.95
CTNNA1-228ENST00000521640 NBPF1Q3BBV0 1214 aa9.13□□□□□ -0.95
CTNNA1-228ENST00000521640 CYB5RLQ6IPT4 315 aa9.13□□□□□ -0.95
CTNNA1-228ENST00000521640 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
CTNNA1-228ENST00000521640 CERKQ8TCT0 537 aa9.13□□□□□ -0.95
CTNNA1-228ENST00000521640 SIGLEC1Q9BZZ2 1709 aa9.13□□□□□ -0.95
CTNNA1-228ENST00000521640 PREX1Q8TCU6 1659 aa9.13□□□□□ -0.95
CTNNA1-228ENST00000521640 YEATS2Q9ULM3 1422 aa9.13□□□□□ -0.95
CTNNA1-228ENST00000521640 PARD3Q8TEW0 1356 aa9.12□□□□□ -0.95
CTNNA1-228ENST00000521640 KIF13AQ9H1H9 1805 aa9.12□□□□□ -0.95
CTNNA1-228ENST00000521640 KDM5AP29375 1690 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-228ENST00000521640 NPC1L1Q9UHC9 1359 aa9.12□□□□□ -0.95
CTNNA1-228ENST00000521640 NEXMIFQ5QGS0 1516 aa9.11□□□□□ -0.95
CTNNA1-228ENST00000521640 ONECUT3O60422 494 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-228ENST00000521640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
CTNNA1-228ENST00000521640 TTC13Q8NBP0 860 aa9.11□□□□□ -0.95
CTNNA1-228ENST00000521640 MRS2Q9HD23 443 aa9.11□□□□□ -0.95
CTNNA1-228ENST00000521640 SLC52A1Q9NWF4 448 aa9.11□□□□□ -0.95
CTNNA1-228ENST00000521640 SEPT9Q9UHD8 586 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-228ENST00000521640 ADGRB1O14514 1584 aa9.11□□□□□ -0.95
CTNNA1-228ENST00000521640 DISP3Q9P2K9 1392 aa9.11□□□□□ -0.95
CTNNA1-228ENST00000521640 ZBED9Q6R2W3 1325 aa9.1□□□□□ -0.95
CTNNA1-228ENST00000521640 MYBBP1AQ9BQG0 1328 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-228ENST00000521640 RAPGEF3O95398 923 aa9.1□□□□□ -0.95
CTNNA1-228ENST00000521640 FAM69CQ0P6D2 419 aa9.1□□□□□ -0.95
CTNNA1-228ENST00000521640 MYOM1P52179 1685 aa9.1□□□□□ -0.95
CTNNA1-228ENST00000521640 SPATA31D1Q6ZQQ2 1576 aa9.09□□□□□ -0.95
CTNNA1-228ENST00000521640 SMAPO00193 183 aa9.09□□□□□ -0.95
CTNNA1-228ENST00000521640 PER1O15534 1290 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-228ENST00000521640 FCHSD2O94868 740 aa9.09□□□□□ -0.95
CTNNA1-228ENST00000521640 FECHP22830 423 aa9.09□□□□□ -0.95
CTNNA1-228ENST00000521640 RNF166Q96A37 237 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-228ENST00000521640 RBM27Q9P2N5 1060 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-228ENST00000521640 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-228ENST00000521640 TMEM131LA2VDJ0 1609 aa9.09□□□□□ -0.95
CTNNA1-228ENST00000521640 GGT6Q6P531 493 aa9.08□□□□□ -0.96
CTNNA1-228ENST00000521640 PACS2Q86VP3 889 aa9.08□□□□□ -0.96
CTNNA1-228ENST00000521640 GPIHBP1Q8IV16 184 aa9.08□□□□□ -0.96
CTNNA1-228ENST00000521640 MRPL50Q8N5N7 158 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-228ENST00000521640 PUS7Q96PZ0 661 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-228ENST00000521640 NBPF3Q9H094 633 aa9.08□□□□□ -0.96
CTNNA1-228ENST00000521640 ERVK-7P63135 1459 aa9.08□□□□□ -0.96
CTNNA1-228ENST00000521640 HNRNPUQ00839 825 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTNNA1-228ENST00000521640 FAM161AQ3B820 660 aa9.07□□□□□ -0.96
CTNNA1-228ENST00000521640 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
CTNNA1-228ENST00000521640 NLRP13Q86W25 1043 aa9.07□□□□□ -0.96
CTNNA1-228ENST00000521640 C14orf93Q9H972 538 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-228ENST00000521640 ADGRF5Q8IZF2 1346 aa9.06□□□□□ -0.96
CTNNA1-228ENST00000521640 TSPOAP1O95153 1857 aa9.06□□□□□ -0.96
CTNNA1-228ENST00000521640 ERICH6BQ5W0A0 696 aa9.06□□□□□ -0.96
CTNNA1-228ENST00000521640 TATDN2Q93075 761 aa9.06□□□□□ -0.96
CTNNA1-228ENST00000521640 KCTD12Q96CX2 325 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-228ENST00000521640 ASXL1Q8IXJ9 1541 aa9.05□□□□□ -0.96
CTNNA1-228ENST00000521640 USP32Q8NFA0 1604 aa9.05□□□□□ -0.96
CTNNA1-228ENST00000521640 QRICH2Q9H0J4 1663 aa9.05□□□□□ -0.96
CTNNA1-228ENST00000521640 TULP1O00294 542 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-228ENST00000521640 HIC1Q14526 733 aa9.05□□□□□ -0.96
CTNNA1-228ENST00000521640 NUDT18Q6ZVK8 323 aa9.05□□□□□ -0.96
CTNNA1-228ENST00000521640 PNMA3Q9UL41 463 aa9.05□□□□□ -0.96
CTNNA1-228ENST00000521640 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-228ENST00000521640 ARHGEF28Q8N1W1 1705 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-228ENST00000521640 NEFLP07196 543 aa9.04□□□□□ -0.96
CTNNA1-228ENST00000521640 CCDC184Q52MB2 194 aa9.04□□□□□ -0.96
CTNNA1-228ENST00000521640 PNISRQ8TF01 805 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-228ENST00000521640 CLTCQ00610 1675 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-228ENST00000521640 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 GNPATO15228 680 aa9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 CFAP70Q5T0N1 1121 aa9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 TMC1Q8TDI8 760 aa9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 ZFRQ96KR1 1074 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 POLR3GLQ9BT43 218 aa9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 ADGRG1Q9Y653 693 aa9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 SMG6Q86US8 1419 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 CENPJQ9HC77 1338 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-228ENST00000521640 NINLQ9Y2I6 1382 aa9.02□□□□□ -0.97
CTNNA1-228ENST00000521640 WNT2BQ93097 391 aa9.02□□□□□ -0.97
CTNNA1-228ENST00000521640 EYA1Q99502 592 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms