RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 PARP4Q9UKK3 1724 aaKnown RBP12.4□□□□□ -0.43
NPIPB3-205ENST00000521589 WDR17Q8IZU2 1322 aa12.39□□□□□ -0.43
NPIPB3-205ENST00000521589 HDGFL2Q7Z4V5 671 aaPredicted RBP12.39□□□□□ -0.43
NPIPB3-205ENST00000521589 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
NPIPB3-205ENST00000521589 TIMELESSQ9UNS1 1208 aa12.39□□□□□ -0.43
NPIPB3-205ENST00000521589 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
NPIPB3-205ENST00000521589 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
NPIPB3-205ENST00000521589 TMC1Q8TDI8 760 aa12.38□□□□□ -0.43
NPIPB3-205ENST00000521589 USP47Q96K76 1375 aa12.38□□□□□ -0.43
NPIPB3-205ENST00000521589 OVOS2A0A0J9YW53 1432 aa12.37□□□□□ -0.43
NPIPB3-205ENST00000521589 OVOS2Q6IE36 1432 aa12.37□□□□□ -0.43
NPIPB3-205ENST00000521589 ZBTB7CA1YPR0 619 aa12.37□□□□□ -0.43
NPIPB3-205ENST00000521589 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
NPIPB3-205ENST00000521589 NME9Q86XW9 330 aa12.37□□□□□ -0.43
NPIPB3-205ENST00000521589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.37□□□□□ -0.43
NPIPB3-205ENST00000521589 PARD3Q8TEW0 1356 aa12.36□□□□□ -0.43
NPIPB3-205ENST00000521589 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
NPIPB3-205ENST00000521589 CARD10Q9BWT7 1032 aa12.36□□□□□ -0.43
NPIPB3-205ENST00000521589 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
NPIPB3-205ENST00000521589 SOX12O15370 315 aa12.35□□□□□ -0.43
NPIPB3-205ENST00000521589 TRIM37O94972 964 aa12.35□□□□□ -0.43
NPIPB3-205ENST00000521589 EN1Q05925 392 aaPredicted RBP12.35□□□□□ -0.43
NPIPB3-205ENST00000521589 CDCA7Q9BWT1 371 aaPredicted RBP12.35□□□□□ -0.43
NPIPB3-205ENST00000521589 LRRC37A3O60309 1634 aa12.35□□□□□ -0.43
NPIPB3-205ENST00000521589 ANKRD36BQ8N2N9 1353 aa12.34□□□□□ -0.43
NPIPB3-205ENST00000521589 CAMKK2Q96RR4 588 aa12.34□□□□□ -0.43
NPIPB3-205ENST00000521589 OVOS2A0A0G2JMS6 1433 aa12.34□□□□□ -0.43
NPIPB3-205ENST00000521589 BCL9O00512 1426 aa12.34□□□□□ -0.43
NPIPB3-205ENST00000521589 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
NPIPB3-205ENST00000521589 ERBB3P21860 1342 aa12.34□□□□□ -0.43
NPIPB3-205ENST00000521589 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
NPIPB3-205ENST00000521589 CCDC7Q96M83 1385 aa12.33□□□□□ -0.44
NPIPB3-205ENST00000521589 DDB1Q16531 1140 aa12.33□□□□□ -0.44
NPIPB3-205ENST00000521589 TMF1P82094 1093 aa12.32□□□□□ -0.44
NPIPB3-205ENST00000521589 APBA3O96018 575 aa12.31□□□□□ -0.44
NPIPB3-205ENST00000521589 CSB-PGBD3P0DP91 1061 aa12.31□□□□□ -0.44
NPIPB3-205ENST00000521589 EZH2Q15910 746 aaKnown RBP12.31□□□□□ -0.44
NPIPB3-205ENST00000521589 LTN1O94822 1766 aa12.3□□□□□ -0.44
NPIPB3-205ENST00000521589 LRP5O75197 1615 aa12.3□□□□□ -0.44
NPIPB3-205ENST00000521589 CDCA8Q53HL2 280 aa12.3□□□□□ -0.44
NPIPB3-205ENST00000521589 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
NPIPB3-205ENST00000521589 RREB1Q92766 1687 aa12.29□□□□□ -0.44
NPIPB3-205ENST00000521589 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
NPIPB3-205ENST00000521589 PCGF6Q9BYE7 350 aa12.29□□□□□ -0.44
NPIPB3-205ENST00000521589 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
NPIPB3-205ENST00000521589 RGPD4Q7Z3J3 1758 aa12.28□□□□□ -0.44
NPIPB3-205ENST00000521589 ANKRD24Q8TF21 1146 aa12.28□□□□□ -0.44
NPIPB3-205ENST00000521589 IP6K1Q92551 441 aa12.28□□□□□ -0.44
NPIPB3-205ENST00000521589 COG3Q96JB2 828 aa12.28□□□□□ -0.44
NPIPB3-205ENST00000521589 SBF2Q86WG5 1849 aa12.27□□□□□ -0.44
NPIPB3-205ENST00000521589 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
NPIPB3-205ENST00000521589 EXOC5O00471 708 aa12.27□□□□□ -0.45
NPIPB3-205ENST00000521589 PLSCR1O15162 318 aa12.27□□□□□ -0.45
NPIPB3-205ENST00000521589 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
NPIPB3-205ENST00000521589 NUP188Q5SRE5 1749 aa12.26□□□□□ -0.45
NPIPB3-205ENST00000521589 FYB1O15117 783 aa12.26□□□□□ -0.45
NPIPB3-205ENST00000521589 NLRP2Q9NX02 1062 aa12.26□□□□□ -0.45
NPIPB3-205ENST00000521589 MAP3K19Q56UN5 1328 aa12.26□□□□□ -0.45
NPIPB3-205ENST00000521589 RTL1A6NKG5 1358 aa12.26□□□□□ -0.45
NPIPB3-205ENST00000521589 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
NPIPB3-205ENST00000521589 IL2RBP14784 551 aa12.25□□□□□ -0.45
NPIPB3-205ENST00000521589 R3HDM1Q15032 1099 aaKnown RBP12.25□□□□□ -0.45
NPIPB3-205ENST00000521589 MYOM1P52179 1685 aa12.25□□□□□ -0.45
NPIPB3-205ENST00000521589 HOXC9P31274 260 aa12.24□□□□□ -0.45
NPIPB3-205ENST00000521589 PTF1AQ7RTS3 328 aa12.24□□□□□ -0.45
NPIPB3-205ENST00000521589 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
NPIPB3-205ENST00000521589 KIF24Q5T7B8 1368 aa12.22□□□□□ -0.45
NPIPB3-205ENST00000521589 FBLN1P23142 703 aa12.22□□□□□ -0.45
NPIPB3-205ENST00000521589 GGNBP2Q9H3C7 697 aa12.22□□□□□ -0.45
NPIPB3-205ENST00000521589 NSD3Q9BZ95 1437 aa12.21□□□□□ -0.45
NPIPB3-205ENST00000521589 AMPHP49418 695 aa12.21□□□□□ -0.45
NPIPB3-205ENST00000521589 NBPF14Q5TI25 921 aa12.21□□□□□ -0.45
NPIPB3-205ENST00000521589 NHSQ6T4R5 1651 aa12.21□□□□□ -0.45
NPIPB3-205ENST00000521589 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.46
NPIPB3-205ENST00000521589 RRS1Q15050 365 aaKnown RBP12.2□□□□□ -0.46
NPIPB3-205ENST00000521589 PROM2Q8N271 834 aa12.2□□□□□ -0.46
NPIPB3-205ENST00000521589 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
NPIPB3-205ENST00000521589 INSRP06213 1382 aa12.19□□□□□ -0.46
NPIPB3-205ENST00000521589 LTV1Q96GA3 475 aaPredicted RBP12.19□□□□□ -0.46
NPIPB3-205ENST00000521589 FLT4P35916 1363 aa12.18□□□□□ -0.46
NPIPB3-205ENST00000521589 KCNQ2O43526 872 aa12.18□□□□□ -0.46
NPIPB3-205ENST00000521589 EIF4G2P78344 907 aaKnown RBP eCLIP12.18□□□□□ -0.46
NPIPB3-205ENST00000521589 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
NPIPB3-205ENST00000521589 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
NPIPB3-205ENST00000521589 MEGF6O75095 1541 aa12.17□□□□□ -0.46
NPIPB3-205ENST00000521589 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
NPIPB3-205ENST00000521589 TXNRD1Q16881 649 aa12.17□□□□□ -0.46
NPIPB3-205ENST00000521589 ANKRD26Q9UPS8 1709 aa12.17□□□□□ -0.46
NPIPB3-205ENST00000521589 HSPA5P11021 654 aaKnown RBP12.16□□□□□ -0.46
NPIPB3-205ENST00000521589 HSP90AB2PQ58FF8 381 aa12.16□□□□□ -0.46
NPIPB3-205ENST00000521589 NBPF6Q5VWK0 638 aa12.16□□□□□ -0.46
NPIPB3-205ENST00000521589 NBPF4Q96M43 638 aa12.16□□□□□ -0.46
NPIPB3-205ENST00000521589 RGPD2P0DJD1 1756 aa12.15□□□□□ -0.46
NPIPB3-205ENST00000521589 SHANK3Q9BYB0 1731 aa12.15□□□□□ -0.46
NPIPB3-205ENST00000521589 NCAPD2Q15021 1401 aa12.15□□□□□ -0.46
NPIPB3-205ENST00000521589 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.46
NPIPB3-205ENST00000521589 BTAF1O14981 1849 aa12.15□□□□□ -0.46
NPIPB3-205ENST00000521589 CASZ1Q86V15 1759 aa12.15□□□□□ -0.46
NPIPB3-205ENST00000521589 ZCRB1Q8TBF4 217 aaKnown RBP12.14□□□□□ -0.47
NPIPB3-205ENST00000521589 DDX54Q8TDD1 881 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms