RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 PPM1GO15355 546 aaPredicted RBP29.57■■■□□ 2.32
PTP4A3-204ENST00000521578 AMPHP49418 695 aa29.54■■■□□ 2.32
PTP4A3-204ENST00000521578 NGLY1Q96IV0 654 aa29.54■■■□□ 2.32
PTP4A3-204ENST00000521578 PPP2R1AP30153 589 aa29.52■■■□□ 2.32
PTP4A3-204ENST00000521578 ZBED9Q6R2W3 1325 aa29.52■■■□□ 2.32
PTP4A3-204ENST00000521578 MYBBP1AQ9BQG0 1328 aaKnown RBP29.52■■■□□ 2.32
PTP4A3-204ENST00000521578 AXIN2Q9Y2T1 843 aa29.51■■■□□ 2.32
PTP4A3-204ENST00000521578 COL14A1Q05707 1796 aaKnown RBP29.51■■■□□ 2.31
PTP4A3-204ENST00000521578 PEAK1Q9H792 1746 aa29.51■■■□□ 2.31
PTP4A3-204ENST00000521578 MTHFSP49914 203 aa29.51■■■□□ 2.31
PTP4A3-204ENST00000521578 BTG4Q9NY30 223 aa29.5■■■□□ 2.31
PTP4A3-204ENST00000521578 COL18A1P39060 1754 aa29.49■■■□□ 2.31
PTP4A3-204ENST00000521578 HOXC9P31274 260 aa29.49■■■□□ 2.31
PTP4A3-204ENST00000521578 IP6K1Q92551 441 aa29.49■■■□□ 2.31
PTP4A3-204ENST00000521578 RGPD5Q99666 1765 aa29.48■■■□□ 2.31
PTP4A3-204ENST00000521578 FLT4P35916 1363 aa29.47■■■□□ 2.31
PTP4A3-204ENST00000521578 PLCH1Q4KWH8 1693 aa29.47■■■□□ 2.31
PTP4A3-204ENST00000521578 LMO7Q8WWI1 1683 aa29.47■■■□□ 2.31
PTP4A3-204ENST00000521578 PNISRQ8TF01 805 aaKnown RBP29.47■■■□□ 2.31
PTP4A3-204ENST00000521578 CAMTA1Q9Y6Y1 1673 aa29.46■■■□□ 2.31
PTP4A3-204ENST00000521578 HSP90AB2PQ58FF8 381 aa29.46■■■□□ 2.31
PTP4A3-204ENST00000521578 RTL1A6NKG5 1358 aa29.46■■■□□ 2.31
PTP4A3-204ENST00000521578 SMG6Q86US8 1419 aaKnown RBP29.46■■■□□ 2.31
PTP4A3-204ENST00000521578 AFF2P51816 1311 aa29.45■■■□□ 2.3
PTP4A3-204ENST00000521578 KIF24Q5T7B8 1368 aa29.44■■■□□ 2.3
PTP4A3-204ENST00000521578 SLIT2O94813 1529 aa29.44■■■□□ 2.3
PTP4A3-204ENST00000521578 FNBP4Q8N3X1 1017 aaPredicted RBP29.44■■■□□ 2.3
PTP4A3-204ENST00000521578 NEFLP07196 543 aa29.43■■■□□ 2.3
PTP4A3-204ENST00000521578 FKBP8Q14318 412 aa29.43■■■□□ 2.3
PTP4A3-204ENST00000521578 LTV1Q96GA3 475 aaPredicted RBP29.43■■■□□ 2.3
PTP4A3-204ENST00000521578 STRN4Q9NRL3 753 aa29.42■■■□□ 2.3
PTP4A3-204ENST00000521578 ABCC6O95255 1503 aa29.42■■■□□ 2.3
PTP4A3-204ENST00000521578 USP21Q9UK80 565 aa29.42■■■□□ 2.3
PTP4A3-204ENST00000521578 EVA1CP58658 441 aa29.41■■■□□ 2.3
PTP4A3-204ENST00000521578 BLMP54132 1417 aaPredicted RBP29.41■■■□□ 2.3
PTP4A3-204ENST00000521578 CDK12Q9NYV4 1490 aaPredicted RBP29.41■■■□□ 2.3
PTP4A3-204ENST00000521578 INSRP06213 1382 aa29.4■■■□□ 2.3
PTP4A3-204ENST00000521578 NWD2Q9ULI1 1742 aa29.4■■■□□ 2.3
PTP4A3-204ENST00000521578 COL5A2P05997 1499 aaPredicted RBP29.4■■■□□ 2.3
PTP4A3-204ENST00000521578 ANKRD24Q8TF21 1146 aa29.4■■■□□ 2.3
PTP4A3-204ENST00000521578 BCL9LQ86UU0 1499 aa29.39■■■□□ 2.3
PTP4A3-204ENST00000521578 UNC5CLQ8IV45 518 aa29.39■■■□□ 2.3
PTP4A3-204ENST00000521578 CSB-PGBD3P0DP91 1061 aa29.37■■■□□ 2.29
PTP4A3-204ENST00000521578 NRAPQ86VF7 1730 aa29.37■■■□□ 2.29
PTP4A3-204ENST00000521578 ERBB3P21860 1342 aa29.37■■■□□ 2.29
PTP4A3-204ENST00000521578 LARP1Q6PKG0 1096 aaKnown RBP29.35■■■□□ 2.29
PTP4A3-204ENST00000521578 CFAP53Q96M91 514 aa29.35■■■□□ 2.29
PTP4A3-204ENST00000521578 PHF23Q9BUL5 403 aaPredicted RBP29.35■■■□□ 2.29
PTP4A3-204ENST00000521578 EIF4A2Q14240 407 aaKnown RBP29.34■■■□□ 2.29
PTP4A3-204ENST00000521578 WDR17Q8IZU2 1322 aa29.33■■■□□ 2.29
PTP4A3-204ENST00000521578 TOM1L2Q6ZVM7 507 aa29.31■■■□□ 2.28
PTP4A3-204ENST00000521578 CCDC9Q9Y3X0 531 aaKnown RBP29.31■■■□□ 2.28
PTP4A3-204ENST00000521578 DIAPH1O60610 1272 aaKnown RBP29.31■■■□□ 2.28
PTP4A3-204ENST00000521578 PELP1Q8IZL8 1130 aaKnown RBP29.31■■■□□ 2.28
PTP4A3-204ENST00000521578 NLRP2Q9NX02 1062 aa29.31■■■□□ 2.28
PTP4A3-204ENST00000521578 COL3A1P02461 1466 aaPredicted RBP29.3■■■□□ 2.28
PTP4A3-204ENST00000521578 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.3■■■□□ 2.28
PTP4A3-204ENST00000521578 ZNF772Q68DY9 489 aaPredicted RBP29.29■■■□□ 2.28
PTP4A3-204ENST00000521578 USP35Q9P2H5 1018 aa29.29■■■□□ 2.28
PTP4A3-204ENST00000521578 RGPD2P0DJD1 1756 aa29.29■■■□□ 2.28
PTP4A3-204ENST00000521578 IL13P35225 146 aa29.28■■■□□ 2.28
PTP4A3-204ENST00000521578 VPS72Q15906 364 aa29.28■■■□□ 2.28
PTP4A3-204ENST00000521578 QTRT2Q9H974 415 aaKnown RBP29.28■■■□□ 2.28
PTP4A3-204ENST00000521578 RGS17Q9UGC6 210 aaPredicted RBP29.28■■■□□ 2.28
PTP4A3-204ENST00000521578 NBPF6Q5VWK0 638 aa29.27■■■□□ 2.28
PTP4A3-204ENST00000521578 NBPF4Q96M43 638 aa29.27■■■□□ 2.28
PTP4A3-204ENST00000521578 TRPC5Q9UL62 973 aaPredicted RBP29.27■■■□□ 2.28
PTP4A3-204ENST00000521578 CRB1P82279 1406 aa29.26■■■□□ 2.28
PTP4A3-204ENST00000521578 USHBP1Q8N6Y0 703 aa29.25■■■□□ 2.27
PTP4A3-204ENST00000521578 EYA1Q99502 592 aa29.25■■■□□ 2.27
PTP4A3-204ENST00000521578 ATRNO75882 1429 aa29.24■■■□□ 2.27
PTP4A3-204ENST00000521578 FAM208AQ9UK61 1670 aaKnown RBP29.24■■■□□ 2.27
PTP4A3-204ENST00000521578 SPATA31A5Q5VU36 1347 aa29.24■■■□□ 2.27
PTP4A3-204ENST00000521578 SPATA31A7Q8IWB4 1347 aa29.24■■■□□ 2.27
PTP4A3-204ENST00000521578 U2SURPO15042 1029 aaKnown RBP29.23■■■□□ 2.27
PTP4A3-204ENST00000521578 CARD10Q9BWT7 1032 aa29.23■■■□□ 2.27
PTP4A3-204ENST00000521578 SPATA31A1Q5TZJ5 1347 aa29.22■■■□□ 2.27
PTP4A3-204ENST00000521578 GJD4Q96KN9 370 aaPredicted RBP29.2■■■□□ 2.27
PTP4A3-204ENST00000521578 NUDCQ9Y266 331 aa29.2■■■□□ 2.27
PTP4A3-204ENST00000521578 ERICH6BQ5W0A0 696 aa29.19■■■□□ 2.26
PTP4A3-204ENST00000521578 POTEAQ6S8J7 498 aa29.19■■■□□ 2.26
PTP4A3-204ENST00000521578 IGSF1Q8N6C5 1336 aa29.18■■■□□ 2.26
PTP4A3-204ENST00000521578 TCP11L2Q8N4U5 519 aa29.18■■■□□ 2.26
PTP4A3-204ENST00000521578 RGPD1P0DJD0 1748 aa29.17■■■□□ 2.26
PTP4A3-204ENST00000521578 SULT6B1Q6IMI4 303 aa29.17■■■□□ 2.26
PTP4A3-204ENST00000521578 GLI3P10071 1580 aa29.16■■■□□ 2.26
PTP4A3-204ENST00000521578 HMOX1P09601 288 aa29.16■■■□□ 2.26
PTP4A3-204ENST00000521578 U2AF1L5P0DN76 240 aaPredicted RBP29.16■■■□□ 2.26
PTP4A3-204ENST00000521578 U2AF1Q01081 240 aaKnown RBP eCLIP29.16■■■□□ 2.26
PTP4A3-204ENST00000521578 AEBP1Q8IUX7 1158 aa29.16■■■□□ 2.26
PTP4A3-204ENST00000521578 FAM98CQ17RN3 349 aaKnown RBP29.15■■■□□ 2.26
PTP4A3-204ENST00000521578 RBM6P78332 1123 aaKnown RBP29.13■■■□□ 2.25
PTP4A3-204ENST00000521578 THRAP3Q9Y2W1 955 aaKnown RBP29.13■■■□□ 2.25
PTP4A3-204ENST00000521578 NCAPD2Q15021 1401 aa29.12■■■□□ 2.25
PTP4A3-204ENST00000521578 WDR43Q15061 677 aaKnown RBP eCLIP29.11■■■□□ 2.25
PTP4A3-204ENST00000521578 RXRBP28702 533 aa29.11■■■□□ 2.25
PTP4A3-204ENST00000521578 BARGINQ6ZT62 677 aa29.1■■■□□ 2.25
PTP4A3-204ENST00000521578 RAPGEF4Q8WZA2 1011 aa29.09■■■□□ 2.25
PTP4A3-204ENST00000521578 A0A0G2JS52 829 aa29.08■■■□□ 2.25
PTP4A3-204ENST00000521578 IL2RBP14784 551 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms