RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 CCER1Q8TC90 406 aaPredicted RBP30.26■■■□□ 2.43
HOXA3-204ENST00000521401 THRAP3Q9Y2W1 955 aaKnown RBP30.26■■■□□ 2.43
HOXA3-204ENST00000521401 CRB1P82279 1406 aa30.24■■■□□ 2.43
HOXA3-204ENST00000521401 DEFB132Q7Z7B7 95 aa30.24■■■□□ 2.43
HOXA3-204ENST00000521401 USP54Q70EL1 1684 aa30.21■■■□□ 2.43
HOXA3-204ENST00000521401 WDR17Q8IZU2 1322 aa30.21■■■□□ 2.43
HOXA3-204ENST00000521401 OVOS2A0A0J9YW53 1432 aa30.2■■■□□ 2.42
HOXA3-204ENST00000521401 OVOS2Q6IE36 1432 aa30.2■■■□□ 2.42
HOXA3-204ENST00000521401 ANKRD36BQ8N2N9 1353 aa30.19■■■□□ 2.42
HOXA3-204ENST00000521401 SF3B2Q13435 895 aaKnown RBP30.19■■■□□ 2.42
HOXA3-204ENST00000521401 TOM1L2Q6ZVM7 507 aa30.18■■■□□ 2.42
HOXA3-204ENST00000521401 PDE3BQ13370 1112 aa30.15■■■□□ 2.42
HOXA3-204ENST00000521401 ABCC6O95255 1503 aa30.14■■■□□ 2.42
HOXA3-204ENST00000521401 CDCA8Q53HL2 280 aa30.14■■■□□ 2.42
HOXA3-204ENST00000521401 FAM196AQ6ZSG2 479 aa30.14■■■□□ 2.42
HOXA3-204ENST00000521401 CARD10Q9BWT7 1032 aa30.13■■■□□ 2.41
HOXA3-204ENST00000521401 CSB-PGBD3P0DP91 1061 aa30.11■■■□□ 2.41
HOXA3-204ENST00000521401 BAG6P46379 1132 aa30.1■■■□□ 2.41
HOXA3-204ENST00000521401 TRIM37O94972 964 aa30.08■■■□□ 2.41
HOXA3-204ENST00000521401 COG3Q96JB2 828 aa30.08■■■□□ 2.41
HOXA3-204ENST00000521401 PARP4Q9UKK3 1724 aaKnown RBP30.08■■■□□ 2.41
HOXA3-204ENST00000521401 ERBB3P21860 1342 aa30.07■■■□□ 2.4
HOXA3-204ENST00000521401 RGPD5Q99666 1765 aa30.07■■■□□ 2.4
HOXA3-204ENST00000521401 DISP2A7MBM2 1401 aa30.06■■■□□ 2.4
HOXA3-204ENST00000521401 FYB1O15117 783 aa30.06■■■□□ 2.4
HOXA3-204ENST00000521401 EN1Q05925 392 aaPredicted RBP30.06■■■□□ 2.4
HOXA3-204ENST00000521401 FBLN1P23142 703 aa30.04■■■□□ 2.4
HOXA3-204ENST00000521401 DDB1Q16531 1140 aa30.04■■■□□ 2.4
HOXA3-204ENST00000521401 CDCA7Q9BWT1 371 aaPredicted RBP30.04■■■□□ 2.4
HOXA3-204ENST00000521401 CARD14Q9BXL6 1004 aa30.04■■■□□ 2.4
HOXA3-204ENST00000521401 CCDC7Q96M83 1385 aa30.03■■■□□ 2.4
HOXA3-204ENST00000521401 RGPD1P0DJD0 1748 aa30.03■■■□□ 2.4
HOXA3-204ENST00000521401 IP6K1Q92551 441 aa30.03■■■□□ 2.4
HOXA3-204ENST00000521401 ANKRD24Q8TF21 1146 aa30.02■■■□□ 2.4
HOXA3-204ENST00000521401 GGNBP2Q9H3C7 697 aa30.02■■■□□ 2.4
HOXA3-204ENST00000521401 LRRC37A3O60309 1634 aa30.01■■■□□ 2.39
HOXA3-204ENST00000521401 HSPA5P11021 654 aaKnown RBP30.01■■■□□ 2.39
HOXA3-204ENST00000521401 EIF4G2P78344 907 aaKnown RBP eCLIP30.01■■■□□ 2.39
HOXA3-204ENST00000521401 MAP3K19Q56UN5 1328 aa30■■■□□ 2.39
HOXA3-204ENST00000521401 TNS1Q9HBL0 1735 aaKnown RBP30■■■□□ 2.39
HOXA3-204ENST00000521401 LTN1O94822 1766 aa29.99■■■□□ 2.39
HOXA3-204ENST00000521401 MARCH10Q8NA82 808 aaPredicted RBP29.98■■■□□ 2.39
HOXA3-204ENST00000521401 CAMKK2Q96RR4 588 aa29.98■■■□□ 2.39
HOXA3-204ENST00000521401 NLRP2Q9NX02 1062 aa29.98■■■□□ 2.39
HOXA3-204ENST00000521401 MYOM1P52179 1685 aa29.98■■■□□ 2.39
HOXA3-204ENST00000521401 OVOS2A0A0G2JMS6 1433 aa29.97■■■□□ 2.39
HOXA3-204ENST00000521401 APBA3O96018 575 aa29.97■■■□□ 2.39
HOXA3-204ENST00000521401 EZH2Q15910 746 aaKnown RBP29.97■■■□□ 2.39
HOXA3-204ENST00000521401 C11orf95C9JLR9 678 aaPredicted RBP29.96■■■□□ 2.39
HOXA3-204ENST00000521401 PEAK1Q9H792 1746 aa29.96■■■□□ 2.39
HOXA3-204ENST00000521401 WNK3Q9BYP7 1800 aa29.95■■■□□ 2.39
HOXA3-204ENST00000521401 HOXC9P31274 260 aa29.95■■■□□ 2.39
HOXA3-204ENST00000521401 NSD3Q9BZ95 1437 aa29.94■■■□□ 2.38
HOXA3-204ENST00000521401 EXOC5O00471 708 aa29.93■■■□□ 2.38
HOXA3-204ENST00000521401 RRS1Q15050 365 aaKnown RBP29.93■■■□□ 2.38
HOXA3-204ENST00000521401 BCL9O00512 1426 aa29.92■■■□□ 2.38
HOXA3-204ENST00000521401 AMPHP49418 695 aa29.91■■■□□ 2.38
HOXA3-204ENST00000521401 LTV1Q96GA3 475 aaPredicted RBP29.91■■■□□ 2.38
HOXA3-204ENST00000521401 TNS2Q63HR2 1409 aa29.89■■■□□ 2.38
HOXA3-204ENST00000521401 IL2RBP14784 551 aa29.89■■■□□ 2.38
HOXA3-204ENST00000521401 POLR3GLQ9BT43 218 aa29.89■■■□□ 2.38
HOXA3-204ENST00000521401 PARD3Q8TEW0 1356 aa29.89■■■□□ 2.37
HOXA3-204ENST00000521401 SRCAPQ6ZRS2 3230 aa29.88■■■□□ 2.37
HOXA3-204ENST00000521401 PTF1AQ7RTS3 328 aa29.88■■■□□ 2.37
HOXA3-204ENST00000521401 RTL1A6NKG5 1358 aa29.88■■■□□ 2.37
HOXA3-204ENST00000521401 PSDA5PKW4 1024 aaPredicted RBP29.85■■■□□ 2.37
HOXA3-204ENST00000521401 BCL11BQ9C0K0 894 aaPredicted RBP29.85■■■□□ 2.37
HOXA3-204ENST00000521401 KIF20BQ96Q89 1820 aa29.82■■■□□ 2.36
HOXA3-204ENST00000521401 CGNL1Q0VF96 1302 aa29.81■■■□□ 2.36
HOXA3-204ENST00000521401 PLSCR1O15162 318 aa29.8■■■□□ 2.36
HOXA3-204ENST00000521401 HSP90AB2PQ58FF8 381 aa29.8■■■□□ 2.36
HOXA3-204ENST00000521401 R3HDM1Q15032 1099 aaKnown RBP29.79■■■□□ 2.36
HOXA3-204ENST00000521401 INSRP06213 1382 aa29.78■■■□□ 2.36
HOXA3-204ENST00000521401 KIF24Q5T7B8 1368 aa29.78■■■□□ 2.36
HOXA3-204ENST00000521401 SBF2Q86WG5 1849 aa29.78■■■□□ 2.36
HOXA3-204ENST00000521401 NBPF6Q5VWK0 638 aa29.78■■■□□ 2.36
HOXA3-204ENST00000521401 NBPF4Q96M43 638 aa29.78■■■□□ 2.36
HOXA3-204ENST00000521401 PANK3Q9H999 370 aa29.78■■■□□ 2.36
HOXA3-204ENST00000521401 FAM208AQ9UK61 1670 aaKnown RBP29.77■■■□□ 2.36
HOXA3-204ENST00000521401 EMILIN1Q9Y6C2 1016 aa29.77■■■□□ 2.36
HOXA3-204ENST00000521401 FLT4P35916 1363 aa29.77■■■□□ 2.36
HOXA3-204ENST00000521401 KCNQ2O43526 872 aa29.76■■■□□ 2.35
HOXA3-204ENST00000521401 RREB1Q92766 1687 aa29.76■■■□□ 2.35
HOXA3-204ENST00000521401 PROM2Q8N271 834 aa29.73■■■□□ 2.35
HOXA3-204ENST00000521401 USHBP1Q8N6Y0 703 aa29.72■■■□□ 2.35
HOXA3-204ENST00000521401 ACSBG1Q96GR2 724 aa29.72■■■□□ 2.35
HOXA3-204ENST00000521401 MEGF6O75095 1541 aa29.71■■■□□ 2.35
HOXA3-204ENST00000521401 NUP188Q5SRE5 1749 aa29.71■■■□□ 2.35
HOXA3-204ENST00000521401 SMG6Q86US8 1419 aaKnown RBP29.71■■■□□ 2.35
HOXA3-204ENST00000521401 DDX54Q8TDD1 881 aaKnown RBP29.7■■■□□ 2.35
HOXA3-204ENST00000521401 POLKQ9UBT6 870 aa29.69■■■□□ 2.34
HOXA3-204ENST00000521401 RGPD2P0DJD1 1756 aa29.69■■■□□ 2.34
HOXA3-204ENST00000521401 NBPF14Q5TI25 921 aa29.68■■■□□ 2.34
HOXA3-204ENST00000521401 ZCRB1Q8TBF4 217 aaKnown RBP29.67■■■□□ 2.34
HOXA3-204ENST00000521401 KIF7Q2M1P5 1343 aa29.67■■■□□ 2.34
HOXA3-204ENST00000521401 WASHC2AQ641Q2 1341 aa29.67■■■□□ 2.34
HOXA3-204ENST00000521401 RGPD3A6NKT7 1758 aaPredicted RBP29.67■■■□□ 2.34
HOXA3-204ENST00000521401 RGPD4Q7Z3J3 1758 aa29.67■■■□□ 2.34
HOXA3-204ENST00000521401 PPM1GO15355 546 aaPredicted RBP29.66■■■□□ 2.34
HOXA3-204ENST00000521401 NHSQ6T4R5 1651 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms