RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 RFX1P22670 979 aa6.31□□□□□ -1.4
HMGN1P28-201ENST00000521340 PTPRNQ16849 979 aa6.31□□□□□ -1.4
HMGN1P28-201ENST00000521340 CTC1Q2NKJ3 1217 aa6.31□□□□□ -1.4
HMGN1P28-201ENST00000521340 PTCRAQ6ISU1 281 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P28-201ENST00000521340 PHTF2Q8N3S3 785 aa6.31□□□□□ -1.4
HMGN1P28-201ENST00000521340 FKBPLQ9UIM3 349 aa6.31□□□□□ -1.4
HMGN1P28-201ENST00000521340 CHIC2Q9UKJ5 165 aa6.31□□□□□ -1.4
HMGN1P28-201ENST00000521340 ZBTB7CA1YPR0 619 aa6.3□□□□□ -1.4
HMGN1P28-201ENST00000521340 PIK3CDO00329 1044 aa6.3□□□□□ -1.4
HMGN1P28-201ENST00000521340 LMOD1P29536 600 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P28-201ENST00000521340 RC3H1Q5TC82 1133 aaKnown RBP6.3□□□□□ -1.4
HMGN1P28-201ENST00000521340 EVA1BQ9NVM1 165 aa6.3□□□□□ -1.4
HMGN1P28-201ENST00000521340 ACIN1Q9UKV3 1341 aaKnown RBP6.29□□□□□ -1.4
HMGN1P28-201ENST00000521340 ZBBXA8MT70 800 aa6.29□□□□□ -1.4
HMGN1P28-201ENST00000521340 ATP9BO43861 1147 aa6.29□□□□□ -1.4
HMGN1P28-201ENST00000521340 HPS1Q92902 700 aa6.29□□□□□ -1.4
HMGN1P28-201ENST00000521340 USTQ9Y2C2 406 aa6.29□□□□□ -1.4
HMGN1P28-201ENST00000521340 ZC3H4Q9UPT8 1303 aaKnown RBP6.28□□□□□ -1.4
HMGN1P28-201ENST00000521340 WNT7BP56706 349 aa6.28□□□□□ -1.4
HMGN1P28-201ENST00000521340 TREML4Q6UXN2 200 aa6.28□□□□□ -1.4
HMGN1P28-201ENST00000521340 NFATC2IPQ8NCF5 419 aa6.28□□□□□ -1.4
HMGN1P28-201ENST00000521340 FAM174AQ8TBP5 190 aa6.28□□□□□ -1.4
HMGN1P28-201ENST00000521340 C11orf95C9JLR9 678 aaPredicted RBP6.27□□□□□ -1.41
HMGN1P28-201ENST00000521340 RGS22Q8NE09 1264 aa6.27□□□□□ -1.41
HMGN1P28-201ENST00000521340 NUDT12Q9BQG2 462 aa6.27□□□□□ -1.41
HMGN1P28-201ENST00000521340 SIAH2O43255 324 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 BRD1O95696 1058 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 EIF4G2P78344 907 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 KCNH2Q12809 1159 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 SEMA3FQ13275 785 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 CDCA8Q53HL2 280 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 AEBP1Q8IUX7 1158 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 ATP13A2Q9NQ11 1180 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 SLAIN2Q9P270 581 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 ZMIZ1Q9ULJ6 1067 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 GPSM3Q9Y4H4 160 aa6.26□□□□□ -1.41
HMGN1P28-201ENST00000521340 SNRPBP14678 240 aaKnown RBP6.25□□□□□ -1.41
HMGN1P28-201ENST00000521340 FAM69CQ0P6D2 419 aa6.25□□□□□ -1.41
HMGN1P28-201ENST00000521340 ELOAQ14241 798 aaKnown RBP6.25□□□□□ -1.41
HMGN1P28-201ENST00000521340 PHLDB3Q6NSJ2 640 aa6.25□□□□□ -1.41
HMGN1P28-201ENST00000521340 PDXDC2PQ6P474 469 aa6.25□□□□□ -1.41
HMGN1P28-201ENST00000521340 PLEKHM2Q8IWE5 1019 aa6.25□□□□□ -1.41
HMGN1P28-201ENST00000521340 CEP126Q9P2H0 1117 aa6.25□□□□□ -1.41
HMGN1P28-201ENST00000521340 CCNYL3P0C7X3 344 aa6.24□□□□□ -1.41
HMGN1P28-201ENST00000521340 SH3BP2P78314 561 aa6.24□□□□□ -1.41
HMGN1P28-201ENST00000521340 GZF1Q9H116 711 aaPredicted RBP6.24□□□□□ -1.41
HMGN1P28-201ENST00000521340 DKK1O94907 266 aa6.23□□□□□ -1.41
HMGN1P28-201ENST00000521340 ALDH1A1P00352 501 aa6.23□□□□□ -1.41
HMGN1P28-201ENST00000521340 PDE4CQ08493 712 aa6.23□□□□□ -1.41
HMGN1P28-201ENST00000521340 NFX1Q12986 1120 aaKnown RBP6.23□□□□□ -1.41
HMGN1P28-201ENST00000521340 TSGA10IPQ3SY00 556 aa6.23□□□□□ -1.41
HMGN1P28-201ENST00000521340 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
HMGN1P28-201ENST00000521340 SH3RF1Q7Z6J0 888 aa6.23□□□□□ -1.41
HMGN1P28-201ENST00000521340 CCDC9Q9Y3X0 531 aaKnown RBP6.23□□□□□ -1.41
HMGN1P28-201ENST00000521340 KCNA1Q09470 495 aa6.22□□□□□ -1.41
HMGN1P28-201ENST00000521340 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
HMGN1P28-201ENST00000521340 PNMA1Q8ND90 353 aa6.22□□□□□ -1.41
HMGN1P28-201ENST00000521340 GPKOWQ92917 476 aaPredicted RBP eCLIP6.22□□□□□ -1.41
HMGN1P28-201ENST00000521340 TRIM47Q96LD4 638 aa6.22□□□□□ -1.41
HMGN1P28-201ENST00000521340 VRTNQ9H8Y1 702 aa6.22□□□□□ -1.41
HMGN1P28-201ENST00000521340 USP17L3A6NCW0 530 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L4A6NCW7 530 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L5A8MUK1 530 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 WFS1O76024 890 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 CSB-PGBD3P0DP91 1061 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 TMEM164Q5U3C3 297 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L1Q7RTZ2 530 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 EHBP1Q8NDI1 1231 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 STK32AQ8WU08 396 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 BAP1Q92560 729 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 UNC93B1Q9H1C4 597 aa6.21□□□□□ -1.42
HMGN1P28-201ENST00000521340 PTK7Q13308 1070 aa6.2□□□□□ -1.42
HMGN1P28-201ENST00000521340 LINC01559Q495D7 138 aa6.2□□□□□ -1.42
HMGN1P28-201ENST00000521340 CRTC2Q53ET0 693 aaPredicted RBP6.2□□□□□ -1.42
HMGN1P28-201ENST00000521340 C4orf48Q5BLP8 95 aa6.2□□□□□ -1.42
HMGN1P28-201ENST00000521340 ADAM32Q8TC27 787 aa6.2□□□□□ -1.42
HMGN1P28-201ENST00000521340 GNEQ9Y223 722 aaKnown RBP6.2□□□□□ -1.42
HMGN1P28-201ENST00000521340 FAM196BA6NMK8 535 aa6.19□□□□□ -1.42
HMGN1P28-201ENST00000521340 ZBTB7BO15156 539 aaPredicted RBP6.19□□□□□ -1.42
HMGN1P28-201ENST00000521340 SKIP12755 728 aa6.19□□□□□ -1.42
HMGN1P28-201ENST00000521340 CTHP32929 405 aa6.19□□□□□ -1.42
HMGN1P28-201ENST00000521340 PTK2Q05397 1052 aa6.19□□□□□ -1.42
HMGN1P28-201ENST00000521340 NPM2Q86SE8 214 aaKnown RBP6.19□□□□□ -1.42
HMGN1P28-201ENST00000521340 TXNDC2Q86VQ3 553 aa6.19□□□□□ -1.42
HMGN1P28-201ENST00000521340 ARMC2Q8NEN0 867 aa6.19□□□□□ -1.42
HMGN1P28-201ENST00000521340 SENP2Q9HC62 589 aa6.19□□□□□ -1.42
HMGN1P28-201ENST00000521340 MCCD1P59942 119 aaPredicted RBP6.18□□□□□ -1.42
HMGN1P28-201ENST00000521340 TRIM46Q7Z4K8 759 aa6.18□□□□□ -1.42
HMGN1P28-201ENST00000521340 DEPDC4Q8N2C3 294 aa6.18□□□□□ -1.42
HMGN1P28-201ENST00000521340 CCDC85AQ96PX6 553 aaPredicted RBP6.18□□□□□ -1.42
HMGN1P28-201ENST00000521340 TERTO14746 1132 aaKnown RBP6.17□□□□□ -1.42
HMGN1P28-201ENST00000521340 MFAP1P55081 439 aaKnown RBP6.17□□□□□ -1.42
HMGN1P28-201ENST00000521340 NCOA4Q13772 614 aa6.17□□□□□ -1.42
HMGN1P28-201ENST00000521340 ZNF511Q8NB15 262 aa6.17□□□□□ -1.42
HMGN1P28-201ENST00000521340 PLPP7Q8NBV4 271 aa6.17□□□□□ -1.42
HMGN1P28-201ENST00000521340 C1QTNF2Q9BXJ5 285 aa6.17□□□□□ -1.42
HMGN1P28-201ENST00000521340 MKRN1Q9UHC7 482 aaKnown RBP6.17□□□□□ -1.42
HMGN1P28-201ENST00000521340 MTMR7Q9Y216 660 aa6.17□□□□□ -1.42
HMGN1P28-201ENST00000521340 CAPN5O15484 640 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 306.6 ms