RNA–Protein interactions for RNA: ENST00000521263.1

C1orf198-205, Transcript of chromosome 1 open reading frame 198, human

TSL 3

Gene C1orf198, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf198-205	ENST00000521263	COL18A1	P39060	1754 aa		40.72	■■■■■ 4.11
C1orf198-205	ENST00000521263	ZRANB1	Q9UGI0	708 aa		40.71	■■■■■ 4.11
C1orf198-205	ENST00000521263	ABCC6	O95255	1503 aa		40.71	■■■■■ 4.11
C1orf198-205	ENST00000521263	CRB1	P82279	1406 aa		40.7	■■■■■ 4.11
C1orf198-205	ENST00000521263	BLM	P54132	1417 aa	Predicted RBP	40.69	■■■■■ 4.1
C1orf198-205	ENST00000521263	EIF4G2	P78344	907 aa	Known RBP eCLIP	40.68	■■■■■ 4.1
C1orf198-205	ENST00000521263	OVOS2	A0A0J9YW53	1432 aa		40.66	■■■■■ 4.1
C1orf198-205	ENST00000521263	OVOS2	Q6IE36	1432 aa		40.66	■■■■■ 4.1
C1orf198-205	ENST00000521263	SF3B2	Q13435	895 aa	Known RBP	40.65	■■■■■ 4.1
C1orf198-205	ENST00000521263	AXIN2	Q9Y2T1	843 aa		40.64	■■■■■ 4.1
C1orf198-205	ENST00000521263	WDR17	Q8IZU2	1322 aa		40.64	■■■■■ 4.1
C1orf198-205	ENST00000521263	TOM1L2	Q6ZVM7	507 aa		40.63	■■■■■ 4.09
C1orf198-205	ENST00000521263	COG3	Q96JB2	828 aa		40.62	■■■■■ 4.09
C1orf198-205	ENST00000521263	CSB-PGBD3	P0DP91	1061 aa		40.58	■■■■■ 4.09
C1orf198-205	ENST00000521263	RGPD5	Q99666	1765 aa		40.58	■■■■■ 4.09
C1orf198-205	ENST00000521263	PDE3B	Q13370	1112 aa		40.57	■■■■■ 4.09
C1orf198-205	ENST00000521263	LTN1	O94822	1766 aa		40.56	■■■■■ 4.08
C1orf198-205	ENST00000521263	HSPA5	P11021	654 aa	Known RBP	40.54	■■■■■ 4.08
C1orf198-205	ENST00000521263	FAM196A	Q6ZSG2	479 aa		40.52	■■■■■ 4.08
C1orf198-205	ENST00000521263	CDCA7	Q9BWT1	371 aa	Predicted RBP	40.52	■■■■■ 4.08
C1orf198-205	ENST00000521263	CARD10	Q9BWT7	1032 aa		40.52	■■■■■ 4.08
C1orf198-205	ENST00000521263	PARP4	Q9UKK3	1724 aa	Known RBP	40.52	■■■■■ 4.08
C1orf198-205	ENST00000521263	MYOM1	P52179	1685 aa		40.52	■■■■■ 4.08
C1orf198-205	ENST00000521263	FYB1	O15117	783 aa		40.48	■■■■■ 4.07
C1orf198-205	ENST00000521263	CCDC7	Q96M83	1385 aa		40.48	■■■■■ 4.07
C1orf198-205	ENST00000521263	FAM182B	Q5T319	152 aa		40.47	■■■■■ 4.07
C1orf198-205	ENST00000521263	C11orf95	C9JLR9	678 aa	Predicted RBP	40.46	■■■■■ 4.07
C1orf198-205	ENST00000521263	RGPD1	P0DJD0	1748 aa		40.46	■■■■■ 4.07
C1orf198-205	ENST00000521263	ERBB3	P21860	1342 aa		40.45	■■■■■ 4.07
C1orf198-205	ENST00000521263	BAG6	P46379	1132 aa		40.44	■■■■■ 4.06
C1orf198-205	ENST00000521263	IP6K1	Q92551	441 aa		40.43	■■■■■ 4.06
C1orf198-205	ENST00000521263	POLR3GL	Q9BT43	218 aa		40.43	■■■■■ 4.06
C1orf198-205	ENST00000521263	GGNBP2	Q9H3C7	697 aa		40.43	■■■■■ 4.06
C1orf198-205	ENST00000521263	KIF20B	Q96Q89	1820 aa		40.43	■■■■■ 4.06
C1orf198-205	ENST00000521263	WNK3	Q9BYP7	1800 aa		40.42	■■■■■ 4.06
C1orf198-205	ENST00000521263	DDB1	Q16531	1140 aa		40.42	■■■■■ 4.06
C1orf198-205	ENST00000521263	NSD3	Q9BZ95	1437 aa		40.41	■■■■■ 4.06
C1orf198-205	ENST00000521263	ANKRD24	Q8TF21	1146 aa		40.4	■■■■■ 4.06
C1orf198-205	ENST00000521263	CARD14	Q9BXL6	1004 aa		40.4	■■■■■ 4.06
C1orf198-205	ENST00000521263	DEFB132	Q7Z7B7	95 aa		40.39	■■■■■ 4.06
C1orf198-205	ENST00000521263	NLRP2	Q9NX02	1062 aa		40.38	■■■■■ 4.05
C1orf198-205	ENST00000521263	MAP3K19	Q56UN5	1328 aa		40.38	■■■■■ 4.05
C1orf198-205	ENST00000521263	AMPH	P49418	695 aa		40.37	■■■■■ 4.05
C1orf198-205	ENST00000521263	LRRC37A3	O60309	1634 aa		40.37	■■■■■ 4.05
C1orf198-205	ENST00000521263	CGNL1	Q0VF96	1302 aa		40.34	■■■■■ 4.05
C1orf198-205	ENST00000521263	RTL1	A6NKG5	1358 aa		40.34	■■■■■ 4.05
C1orf198-205	ENST00000521263	DISP2	A7MBM2	1401 aa		40.33	■■■■■ 4.05
C1orf198-205	ENST00000521263	OVOS2	A0A0G2JMS6	1433 aa		40.33	■■■■■ 4.05
C1orf198-205	ENST00000521263	FAM208A	Q9UK61	1670 aa	Known RBP	40.32	■■■■■ 4.05
C1orf198-205	ENST00000521263	TRIM37	O94972	964 aa		40.32	■■■■■ 4.05
C1orf198-205	ENST00000521263	HOXC9	P31274	260 aa		40.31	■■■■■ 4.04
C1orf198-205	ENST00000521263	TNS1	Q9HBL0	1735 aa	Known RBP	40.3	■■■■■ 4.04
C1orf198-205	ENST00000521263	EXOC5	O00471	708 aa		40.29	■■■■■ 4.04
C1orf198-205	ENST00000521263	FBLN1	P23142	703 aa		40.26	■■■■■ 4.04
C1orf198-205	ENST00000521263	KIF24	Q5T7B8	1368 aa		40.25	■■■■■ 4.03
C1orf198-205	ENST00000521263	IL2RB	P14784	551 aa		40.25	■■■■■ 4.03
C1orf198-205	ENST00000521263	RRS1	Q15050	365 aa	Known RBP	40.25	■■■■■ 4.03
C1orf198-205	ENST00000521263	LTV1	Q96GA3	475 aa	Predicted RBP	40.25	■■■■■ 4.03
C1orf198-205	ENST00000521263	PEAK1	Q9H792	1746 aa		40.23	■■■■■ 4.03
C1orf198-205	ENST00000521263	EN1	Q05925	392 aa	Predicted RBP	40.23	■■■■■ 4.03
C1orf198-205	ENST00000521263	TNS2	Q63HR2	1409 aa		40.22	■■■■■ 4.03
C1orf198-205	ENST00000521263	APBA3	O96018	575 aa		40.21	■■■■■ 4.03
C1orf198-205	ENST00000521263	BCL9	O00512	1426 aa		40.2	■■■■■ 4.03
C1orf198-205	ENST00000521263	SMG6	Q86US8	1419 aa	Known RBP	40.2	■■■■■ 4.03
C1orf198-205	ENST00000521263	PANK3	Q9H999	370 aa		40.2	■■■■■ 4.03
C1orf198-205	ENST00000521263	PARD3	Q8TEW0	1356 aa		40.2	■■■■■ 4.03
C1orf198-205	ENST00000521263	MARCH10	Q8NA82	808 aa	Predicted RBP	40.19	■■■■■ 4.02
C1orf198-205	ENST00000521263	FLT4	P35916	1363 aa		40.18	■■■■■ 4.02
C1orf198-205	ENST00000521263	INSR	P06213	1382 aa		40.15	■■■■■ 4.02
C1orf198-205	ENST00000521263	SBF2	Q86WG5	1849 aa		40.14	■■■■■ 4.02
C1orf198-205	ENST00000521263	CAMKK2	Q96RR4	588 aa		40.12	■■■■■ 4.01
C1orf198-205	ENST00000521263	ANKRD26	Q9UPS8	1709 aa		40.12	■■■■■ 4.01
C1orf198-205	ENST00000521263	NSD2	O96028	1365 aa		40.11	■■■■■ 4.01
C1orf198-205	ENST00000521263	EZH2	Q15910	746 aa	Known RBP	40.1	■■■■■ 4.01
C1orf198-205	ENST00000521263	BCL11B	Q9C0K0	894 aa	Predicted RBP	40.1	■■■■■ 4.01
C1orf198-205	ENST00000521263	HSP90AB2P	Q58FF8	381 aa		40.08	■■■■■ 4.01
C1orf198-205	ENST00000521263	KIF7	Q2M1P5	1343 aa		40.08	■■■■■ 4.01
C1orf198-205	ENST00000521263	EMILIN1	Q9Y6C2	1016 aa		40.06	■■■■■ 4
C1orf198-205	ENST00000521263	KNSTRN	Q9Y448	316 aa		40.05	■■■■■ 4
C1orf198-205	ENST00000521263	RGPD2	P0DJD1	1756 aa		40.05	■■■■■ 4
C1orf198-205	ENST00000521263	MAP2	P11137	1827 aa	Known RBP	40.04	■■■■■ 4
C1orf198-205	ENST00000521263	PPM1G	O15355	546 aa	Predicted RBP	40.03	■■■■■ 4
C1orf198-205	ENST00000521263	NBPF6	Q5VWK0	638 aa		40.02	■■■■■ 4
C1orf198-205	ENST00000521263	NBPF4	Q96M43	638 aa		40.02	■■■■■ 4
C1orf198-205	ENST00000521263	RGPD3	A6NKT7	1758 aa	Predicted RBP	40	■■■■□ 3.99
C1orf198-205	ENST00000521263	RGPD4	Q7Z3J3	1758 aa		40	■■■■□ 3.99
C1orf198-205	ENST00000521263	WASHC2A	Q641Q2	1341 aa		40	■■■■□ 3.99
C1orf198-205	ENST00000521263	PLSCR1	O15162	318 aa		40	■■■■□ 3.99
C1orf198-205	ENST00000521263	RREB1	Q92766	1687 aa		39.99	■■■■□ 3.99
C1orf198-205	ENST00000521263	RAPGEF4	Q8WZA2	1011 aa		39.98	■■■■□ 3.99
C1orf198-205	ENST00000521263	POLK	Q9UBT6	870 aa		39.98	■■■■□ 3.99
C1orf198-205	ENST00000521263	TNNT2	P45379	298 aa	Predicted RBP	39.95	■■■■□ 3.99
C1orf198-205	ENST00000521263	ZCRB1	Q8TBF4	217 aa	Known RBP	39.95	■■■■□ 3.99
C1orf198-205	ENST00000521263	MORC1	Q86VD1	984 aa		39.94	■■■■□ 3.98
C1orf198-205	ENST00000521263	DDX54	Q8TDD1	881 aa	Known RBP	39.94	■■■■□ 3.98
C1orf198-205	ENST00000521263	NHS	Q6T4R5	1651 aa		39.93	■■■■□ 3.98
C1orf198-205	ENST00000521263	MEGF6	O75095	1541 aa		39.93	■■■■□ 3.98
C1orf198-205	ENST00000521263	NBPF14	Q5TI25	921 aa		39.93	■■■■□ 3.98
C1orf198-205	ENST00000521263	USHBP1	Q8N6Y0	703 aa		39.93	■■■■□ 3.98
C1orf198-205	ENST00000521263	TAT	P17735	454 aa	Predicted RBP	39.92	■■■■□ 3.98

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms