RNA–Protein interactions for RNA: ENST00000521175.1

MCPH1-205, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-205ENST00000521175 PIK3C2AO00443 1686 aa17.83■□□□□ 0.45
MCPH1-205ENST00000521175 COL5A2P05997 1499 aaPredicted RBP17.82■□□□□ 0.44
MCPH1-205ENST00000521175 AKAP12Q02952 1782 aa17.82■□□□□ 0.44
MCPH1-205ENST00000521175 SOX12O15370 315 aa17.82■□□□□ 0.44
MCPH1-205ENST00000521175 FAM196AQ6ZSG2 479 aa17.82■□□□□ 0.44
MCPH1-205ENST00000521175 BARGINQ6ZT62 677 aa17.82■□□□□ 0.44
MCPH1-205ENST00000521175 SRCAPQ6ZRS2 3230 aa17.81■□□□□ 0.44
MCPH1-205ENST00000521175 SPDYE4A6NLX3 237 aa17.81■□□□□ 0.44
MCPH1-205ENST00000521175 SLIT3O75094 1523 aa17.81■□□□□ 0.44
MCPH1-205ENST00000521175 EZH2Q15910 746 aaKnown RBP17.8■□□□□ 0.44
MCPH1-205ENST00000521175 APBA3O96018 575 aa17.79■□□□□ 0.44
MCPH1-205ENST00000521175 CARD11Q9BXL7 1154 aa17.78■□□□□ 0.44
MCPH1-205ENST00000521175 DISP2A7MBM2 1401 aa17.78■□□□□ 0.44
MCPH1-205ENST00000521175 CRB1P82279 1406 aa17.78■□□□□ 0.44
MCPH1-205ENST00000521175 PARP4Q9UKK3 1724 aaKnown RBP17.78■□□□□ 0.44
MCPH1-205ENST00000521175 TONSLQ96HA7 1378 aa17.78■□□□□ 0.44
MCPH1-205ENST00000521175 TTC21BQ7Z4L5 1316 aa17.77■□□□□ 0.44
MCPH1-205ENST00000521175 LRP5O75197 1615 aa17.77■□□□□ 0.44
MCPH1-205ENST00000521175 R3HDM1Q15032 1099 aaKnown RBP17.77■□□□□ 0.44
MCPH1-205ENST00000521175 TOM1L2Q6ZVM7 507 aa17.77■□□□□ 0.44
MCPH1-205ENST00000521175 ZNF692Q9BU19 519 aaPredicted RBP17.77■□□□□ 0.44
MCPH1-205ENST00000521175 THRAP3Q9Y2W1 955 aaKnown RBP17.77■□□□□ 0.44
MCPH1-205ENST00000521175 AATKQ6ZMQ8 1374 aa17.77■□□□□ 0.43
MCPH1-205ENST00000521175 KTN1Q86UP2 1357 aaKnown RBP17.76■□□□□ 0.43
MCPH1-205ENST00000521175 RGPD5Q99666 1765 aa17.76■□□□□ 0.43
MCPH1-205ENST00000521175 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
MCPH1-205ENST00000521175 CPSF1Q10570 1443 aaKnown RBP17.74■□□□□ 0.43
MCPH1-205ENST00000521175 COL18A1P39060 1754 aa17.74■□□□□ 0.43
MCPH1-205ENST00000521175 LRRC37A3O60309 1634 aa17.74■□□□□ 0.43
MCPH1-205ENST00000521175 CSB-PGBD3P0DP91 1061 aa17.74■□□□□ 0.43
MCPH1-205ENST00000521175 TMC1Q8TDI8 760 aa17.74■□□□□ 0.43
MCPH1-205ENST00000521175 TTC21AQ8NDW8 1320 aa17.73■□□□□ 0.43
MCPH1-205ENST00000521175 WNK3Q9BYP7 1800 aa17.73■□□□□ 0.43
MCPH1-205ENST00000521175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.73■□□□□ 0.43
MCPH1-205ENST00000521175 KCNH5Q8NCM2 988 aa17.73■□□□□ 0.43
MCPH1-205ENST00000521175 CAMKK2Q96RR4 588 aa17.73■□□□□ 0.43
MCPH1-205ENST00000521175 AXIN2Q9Y2T1 843 aa17.72■□□□□ 0.43
MCPH1-205ENST00000521175 RREB1Q92766 1687 aa17.71■□□□□ 0.43
MCPH1-205ENST00000521175 DDB1Q16531 1140 aa17.71■□□□□ 0.43
MCPH1-205ENST00000521175 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
MCPH1-205ENST00000521175 OVOS2A0A0J9YW53 1432 aa17.71■□□□□ 0.43
MCPH1-205ENST00000521175 OVOS2Q6IE36 1432 aa17.71■□□□□ 0.43
MCPH1-205ENST00000521175 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.42
MCPH1-205ENST00000521175 NUP188Q5SRE5 1749 aa17.7■□□□□ 0.42
MCPH1-205ENST00000521175 ARHGEF25Q86VW2 580 aa17.7■□□□□ 0.42
MCPH1-205ENST00000521175 PARD3Q8TEW0 1356 aa17.69■□□□□ 0.42
MCPH1-205ENST00000521175 SBNO2Q9Y2G9 1366 aa17.69■□□□□ 0.42
MCPH1-205ENST00000521175 NFAT5O94916 1531 aa17.69■□□□□ 0.42
MCPH1-205ENST00000521175 HDGFL2Q7Z4V5 671 aaPredicted RBP17.68■□□□□ 0.42
MCPH1-205ENST00000521175 PEAK1Q9H792 1746 aa17.67■□□□□ 0.42
MCPH1-205ENST00000521175 NME9Q86XW9 330 aa17.67■□□□□ 0.42
MCPH1-205ENST00000521175 SBF2Q86WG5 1849 aa17.67■□□□□ 0.42
MCPH1-205ENST00000521175 LTN1O94822 1766 aa17.66■□□□□ 0.42
MCPH1-205ENST00000521175 NBPF14Q5TI25 921 aa17.66■□□□□ 0.42
MCPH1-205ENST00000521175 SLC12A5Q9H2X9 1139 aa17.66■□□□□ 0.42
MCPH1-205ENST00000521175 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
MCPH1-205ENST00000521175 C11orf95C9JLR9 678 aaPredicted RBP17.65■□□□□ 0.42
MCPH1-205ENST00000521175 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
MCPH1-205ENST00000521175 CDCA7Q9BWT1 371 aaPredicted RBP17.63■□□□□ 0.41
MCPH1-205ENST00000521175 TERF2IPQ9NYB0 399 aa17.63■□□□□ 0.41
MCPH1-205ENST00000521175 USP54Q70EL1 1684 aa17.63■□□□□ 0.41
MCPH1-205ENST00000521175 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
MCPH1-205ENST00000521175 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
MCPH1-205ENST00000521175 USP31Q70CQ4 1352 aa17.62■□□□□ 0.41
MCPH1-205ENST00000521175 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
MCPH1-205ENST00000521175 EDC4Q6P2E9 1401 aaKnown RBP17.62■□□□□ 0.41
MCPH1-205ENST00000521175 ABCC6O95255 1503 aa17.62■□□□□ 0.41
MCPH1-205ENST00000521175 NLRP2Q9NX02 1062 aa17.61■□□□□ 0.41
MCPH1-205ENST00000521175 ST20-MTHFSA0A0A6YYL1 179 aa17.6■□□□□ 0.41
MCPH1-205ENST00000521175 EXOC5O00471 708 aa17.6■□□□□ 0.41
MCPH1-205ENST00000521175 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
MCPH1-205ENST00000521175 PTF1AQ7RTS3 328 aa17.6■□□□□ 0.41
MCPH1-205ENST00000521175 PROM2Q8N271 834 aa17.6■□□□□ 0.41
MCPH1-205ENST00000521175 RGPD3A6NKT7 1758 aaPredicted RBP17.59■□□□□ 0.41
MCPH1-205ENST00000521175 RGPD4Q7Z3J3 1758 aa17.59■□□□□ 0.41
MCPH1-205ENST00000521175 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
MCPH1-205ENST00000521175 TNS2Q63HR2 1409 aa17.58■□□□□ 0.41
MCPH1-205ENST00000521175 ERBB3P21860 1342 aa17.58■□□□□ 0.4
MCPH1-205ENST00000521175 ANKRD24Q8TF21 1146 aa17.57■□□□□ 0.4
MCPH1-205ENST00000521175 PLSCR1O15162 318 aa17.56■□□□□ 0.4
MCPH1-205ENST00000521175 LTV1Q96GA3 475 aaPredicted RBP17.56■□□□□ 0.4
MCPH1-205ENST00000521175 PPP1R1BQ9UD71 204 aaPredicted RBP17.56■□□□□ 0.4
MCPH1-205ENST00000521175 ACSBG1Q96GR2 724 aa17.55■□□□□ 0.4
MCPH1-205ENST00000521175 TESK2Q96S53 571 aa17.55■□□□□ 0.4
MCPH1-205ENST00000521175 IL2RBP14784 551 aa17.54■□□□□ 0.4
MCPH1-205ENST00000521175 PUS7Q96PZ0 661 aaKnown RBP17.54■□□□□ 0.4
MCPH1-205ENST00000521175 ANO8Q9HCE9 1232 aaPredicted RBP17.54■□□□□ 0.4
MCPH1-205ENST00000521175 BCL9O00512 1426 aa17.54■□□□□ 0.4
MCPH1-205ENST00000521175 NINLQ9Y2I6 1382 aa17.53■□□□□ 0.4
MCPH1-205ENST00000521175 SPDYE2BA6NHP3 402 aa17.53■□□□□ 0.4
MCPH1-205ENST00000521175 SPDYE6P0CI01 402 aa17.53■□□□□ 0.4
MCPH1-205ENST00000521175 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
MCPH1-205ENST00000521175 COG3Q96JB2 828 aa17.53■□□□□ 0.4
MCPH1-205ENST00000521175 SPON1Q9HCB6 807 aa17.53■□□□□ 0.4
MCPH1-205ENST00000521175 NHSQ6T4R5 1651 aa17.52■□□□□ 0.4
MCPH1-205ENST00000521175 KCNQ2O43526 872 aa17.52■□□□□ 0.4
MCPH1-205ENST00000521175 USP47Q96K76 1375 aa17.52■□□□□ 0.39
MCPH1-205ENST00000521175 KAT6BQ8WYB5 2073 aa17.51■□□□□ 0.39
MCPH1-205ENST00000521175 TXNRD1Q16881 649 aa17.51■□□□□ 0.39
MCPH1-205ENST00000521175 FAM208AQ9UK61 1670 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms