RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 PRM3Q9NNZ6 103 aa10.4□□□□□ -0.74
PTPN12-214ENST00000520947 PCDHB9Q9Y5E1 797 aa10.4□□□□□ -0.74
PTPN12-214ENST00000520947 RAB15P59190 212 aa10.39□□□□□ -0.75
PTPN12-214ENST00000520947 ITPKCQ96DU7 683 aa10.39□□□□□ -0.75
PTPN12-214ENST00000520947 ZFAND3Q9H8U3 227 aa10.39□□□□□ -0.75
PTPN12-214ENST00000520947 GDPD2Q9HCC8 539 aa10.39□□□□□ -0.75
PTPN12-214ENST00000520947 CDV3Q9UKY7 258 aaKnown RBP10.39□□□□□ -0.75
PTPN12-214ENST00000520947 ZIC2O95409 532 aaPredicted RBP10.38□□□□□ -0.75
PTPN12-214ENST00000520947 BMP1P13497 986 aa10.38□□□□□ -0.75
PTPN12-214ENST00000520947 NR1H3Q13133 447 aa10.38□□□□□ -0.75
PTPN12-214ENST00000520947 CCDC116Q8IYX3 515 aa10.38□□□□□ -0.75
PTPN12-214ENST00000520947 ATP13A2Q9NQ11 1180 aa10.38□□□□□ -0.75
PTPN12-214ENST00000520947 GMPR2Q9P2T1 348 aaKnown RBP10.38□□□□□ -0.75
PTPN12-214ENST00000520947 ABL2P42684 1182 aa10.37□□□□□ -0.75
PTPN12-214ENST00000520947 KLF16Q9BXK1 252 aaPredicted RBP10.37□□□□□ -0.75
PTPN12-214ENST00000520947 NBPF20Q3BBV1 942 aa10.36□□□□□ -0.75
PTPN12-214ENST00000520947 INTS6LQ5JSJ4 861 aaKnown RBP10.36□□□□□ -0.75
PTPN12-214ENST00000520947 PPP1R26Q5T8A7 1209 aaPredicted RBP10.35□□□□□ -0.75
PTPN12-214ENST00000520947 IRF5Q13568 498 aa10.34□□□□□ -0.75
PTPN12-214ENST00000520947 TRIM46Q7Z4K8 759 aa10.34□□□□□ -0.75
PTPN12-214ENST00000520947 EMILIN1Q9Y6C2 1016 aa10.34□□□□□ -0.75
PTPN12-214ENST00000520947 ZNF330Q9Y3S2 320 aaPredicted RBP10.33□□□□□ -0.76
PTPN12-214ENST00000520947 C11orf95C9JLR9 678 aaPredicted RBP10.32□□□□□ -0.76
PTPN12-214ENST00000520947 GIGYF1O75420 1035 aaPredicted RBP10.32□□□□□ -0.76
PTPN12-214ENST00000520947 COG6Q9Y2V7 657 aa10.32□□□□□ -0.76
PTPN12-214ENST00000520947 DHX9Q08211 1270 aaKnown RBP10.31□□□□□ -0.76
PTPN12-214ENST00000520947 VAC14Q08AM6 782 aa10.31□□□□□ -0.76
PTPN12-214ENST00000520947 FLIIQ13045 1269 aa10.31□□□□□ -0.76
PTPN12-214ENST00000520947 POM121Q96HA1 1249 aa10.31□□□□□ -0.76
PTPN12-214ENST00000520947 TMPRSS4Q9NRS4 437 aa10.31□□□□□ -0.76
PTPN12-214ENST00000520947 PGPEP1Q9NXJ5 209 aa10.31□□□□□ -0.76
PTPN12-214ENST00000520947 CBLBQ13191 982 aa10.3□□□□□ -0.76
PTPN12-214ENST00000520947 MRPL14Q6P1L8 145 aaKnown RBP10.3□□□□□ -0.76
PTPN12-214ENST00000520947 ESPNB1AK53 854 aa10.29□□□□□ -0.76
PTPN12-214ENST00000520947 ERVH48-1M5A8F1 160 aa10.29□□□□□ -0.76
PTPN12-214ENST00000520947 UBTFP17480 764 aaKnown RBP10.29□□□□□ -0.76
PTPN12-214ENST00000520947 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
PTPN12-214ENST00000520947 SENP2Q9HC62 589 aa10.29□□□□□ -0.76
PTPN12-214ENST00000520947 C6orf118Q5T5N4 469 aa10.28□□□□□ -0.76
PTPN12-214ENST00000520947 ZFP42Q96MM3 310 aa10.28□□□□□ -0.76
PTPN12-214ENST00000520947 RAD21O60216 631 aa10.27□□□□□ -0.77
PTPN12-214ENST00000520947 SNRPBP14678 240 aaKnown RBP10.27□□□□□ -0.77
PTPN12-214ENST00000520947 SCARF1Q14162 830 aa10.27□□□□□ -0.77
PTPN12-214ENST00000520947 MEIOBQ8N635 442 aa10.27□□□□□ -0.77
PTPN12-214ENST00000520947 ZNF784Q8NCA9 323 aaPredicted RBP10.27□□□□□ -0.77
PTPN12-214ENST00000520947 TRIM47Q96LD4 638 aa10.27□□□□□ -0.77
PTPN12-214ENST00000520947 MCCD1P59942 119 aaPredicted RBP10.26□□□□□ -0.77
PTPN12-214ENST00000520947 EIF4G2P78344 907 aaKnown RBP eCLIP10.26□□□□□ -0.77
PTPN12-214ENST00000520947 UPP2O95045 317 aa10.25□□□□□ -0.77
PTPN12-214ENST00000520947 BMP2P12643 396 aa10.25□□□□□ -0.77
PTPN12-214ENST00000520947 SEPT12Q8IYM1 358 aa10.25□□□□□ -0.77
PTPN12-214ENST00000520947 LINC00528Q8N1L1 170 aa10.25□□□□□ -0.77
PTPN12-214ENST00000520947 ZNF592Q92610 1267 aa10.25□□□□□ -0.77
PTPN12-214ENST00000520947 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
PTPN12-214ENST00000520947 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
PTPN12-214ENST00000520947 WASHC4Q2M389 1173 aa10.24□□□□□ -0.77
PTPN12-214ENST00000520947 TREML4Q6UXN2 200 aa10.24□□□□□ -0.77
PTPN12-214ENST00000520947 RNF20Q5VTR2 975 aa10.23□□□□□ -0.77
PTPN12-214ENST00000520947 AGBL1Q96MI9 1066 aa10.23□□□□□ -0.77
PTPN12-214ENST00000520947 CEP126Q9P2H0 1117 aa10.23□□□□□ -0.77
PTPN12-214ENST00000520947 LCE2AQ5TA79 106 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-214ENST00000520947 Q6ZVU0 165 aa10.22□□□□□ -0.77
PTPN12-214ENST00000520947 TSEN34Q9BSV6 310 aaKnown RBP10.22□□□□□ -0.77
PTPN12-214ENST00000520947 LILRA1O75019 489 aa10.21□□□□□ -0.77
PTPN12-214ENST00000520947 ADD1P35611 737 aaKnown RBP10.21□□□□□ -0.77
PTPN12-214ENST00000520947 RELBQ01201 579 aa10.21□□□□□ -0.77
PTPN12-214ENST00000520947 WWC1Q8IX03 1113 aa10.21□□□□□ -0.77
PTPN12-214ENST00000520947 CLUAP1Q96AJ1 413 aa10.21□□□□□ -0.77
PTPN12-214ENST00000520947 PCDHB11Q9Y5F2 797 aa10.21□□□□□ -0.77
PTPN12-214ENST00000520947 SOBPA7XYQ1 873 aa10.2□□□□□ -0.78
PTPN12-214ENST00000520947 SEMA3FQ13275 785 aa10.19□□□□□ -0.78
PTPN12-214ENST00000520947 ADH1AP07327 375 aa10.18□□□□□ -0.78
PTPN12-214ENST00000520947 ZNF395Q9H8N7 513 aaPredicted RBP10.18□□□□□ -0.78
PTPN12-214ENST00000520947 SCTRP47872 440 aa10.17□□□□□ -0.78
PTPN12-214ENST00000520947 SLFNL1Q499Z3 407 aa10.17□□□□□ -0.78
PTPN12-214ENST00000520947 CCDC85AQ96PX6 553 aaPredicted RBP10.17□□□□□ -0.78
PTPN12-214ENST00000520947 WFS1O76024 890 aa10.16□□□□□ -0.78
PTPN12-214ENST00000520947 TSGA10IPQ3SY00 556 aa10.16□□□□□ -0.78
PTPN12-214ENST00000520947 CC2D2BQ6DHV5 1058 aa10.16□□□□□ -0.78
PTPN12-214ENST00000520947 CCDC125Q86Z20 511 aa10.16□□□□□ -0.78
PTPN12-214ENST00000520947 RNF135Q8IUD6 432 aa10.16□□□□□ -0.78
PTPN12-214ENST00000520947 CDCA7Q9BWT1 371 aaPredicted RBP10.16□□□□□ -0.78
PTPN12-214ENST00000520947 POM121CA8CG34 1229 aa10.15□□□□□ -0.78
PTPN12-214ENST00000520947 MAN1A2O60476 641 aa10.15□□□□□ -0.78
PTPN12-214ENST00000520947 SOX11P35716 441 aa10.15□□□□□ -0.78
PTPN12-214ENST00000520947 ERVK-9P63128 1117 aa10.15□□□□□ -0.78
PTPN12-214ENST00000520947 ESF1Q9H501 851 aaKnown RBP10.15□□□□□ -0.78
PTPN12-214ENST00000520947 FIGNL2A6NMB9 653 aa10.14□□□□□ -0.79
PTPN12-214ENST00000520947 SPINT1O43278 529 aa10.14□□□□□ -0.79
PTPN12-214ENST00000520947 NFX1Q12986 1120 aaKnown RBP10.14□□□□□ -0.79
PTPN12-214ENST00000520947 PHTF2Q8N3S3 785 aa10.14□□□□□ -0.79
PTPN12-214ENST00000520947 KDF1Q8NAX2 398 aaPredicted RBP10.14□□□□□ -0.79
PTPN12-214ENST00000520947 TRIM52Q96A61 297 aa10.14□□□□□ -0.79
PTPN12-214ENST00000520947 INSM2Q96T92 566 aaPredicted RBP10.14□□□□□ -0.79
PTPN12-214ENST00000520947 SOS2Q07890 1332 aaPredicted RBP10.13□□□□□ -0.79
PTPN12-214ENST00000520947 TTLL8A6PVC2 850 aa10.13□□□□□ -0.79
PTPN12-214ENST00000520947 PTGIRP43119 386 aa10.13□□□□□ -0.79
PTPN12-214ENST00000520947 POLMQ9NP87 494 aaPredicted RBP10.13□□□□□ -0.79
PTPN12-214ENST00000520947 DOLKQ9UPQ8 538 aa10.13□□□□□ -0.79
PTPN12-214ENST00000520947 ATP5J2-PTCD1G3V325 749 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms