RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 TXNRD1Q16881 649 aa19.32■□□□□ 0.68
SRGAP3-212ENST00000520860 TOM1L2Q6ZVM7 507 aa19.32■□□□□ 0.68
SRGAP3-212ENST00000520860 DCAF11Q8TEB1 546 aa19.32■□□□□ 0.68
SRGAP3-212ENST00000520860 TOPAZ1Q8N9V7 1692 aa19.32■□□□□ 0.68
SRGAP3-212ENST00000520860 GIGYF1O75420 1035 aaPredicted RBP19.3■□□□□ 0.68
SRGAP3-212ENST00000520860 MARCH10Q8NA82 808 aaPredicted RBP19.3■□□□□ 0.68
SRGAP3-212ENST00000520860 STAC3Q96MF2 364 aa19.3■□□□□ 0.68
SRGAP3-212ENST00000520860 CDCA7Q9BWT1 371 aaPredicted RBP19.3■□□□□ 0.68
SRGAP3-212ENST00000520860 BCL9O00512 1426 aa19.3■□□□□ 0.68
SRGAP3-212ENST00000520860 ARXQ96QS3 562 aa19.29■□□□□ 0.68
SRGAP3-212ENST00000520860 AATKQ6ZMQ8 1374 aa19.29■□□□□ 0.68
SRGAP3-212ENST00000520860 SGIP1Q9BQI5 828 aa19.28■□□□□ 0.68
SRGAP3-212ENST00000520860 GPR162Q16538 588 aa19.27■□□□□ 0.68
SRGAP3-212ENST00000520860 MAP3K5Q99683 1374 aa19.26■□□□□ 0.67
SRGAP3-212ENST00000520860 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
SRGAP3-212ENST00000520860 BRD4O60885 1362 aaPredicted RBP19.25■□□□□ 0.67
SRGAP3-212ENST00000520860 NLRP6P59044 892 aa19.25■□□□□ 0.67
SRGAP3-212ENST00000520860 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
SRGAP3-212ENST00000520860 PPIP5K1Q6PFW1 1433 aa19.23■□□□□ 0.67
SRGAP3-212ENST00000520860 WNK3Q9BYP7 1800 aa19.23■□□□□ 0.67
SRGAP3-212ENST00000520860 SRPK2P78362 688 aaKnown RBP19.22■□□□□ 0.67
SRGAP3-212ENST00000520860 UTRNP46939 3433 aa19.21■□□□□ 0.67
SRGAP3-212ENST00000520860 EXOC5O00471 708 aa19.21■□□□□ 0.67
SRGAP3-212ENST00000520860 CSB-PGBD3P0DP91 1061 aa19.21■□□□□ 0.67
SRGAP3-212ENST00000520860 SLIT3O75094 1523 aa19.2■□□□□ 0.66
SRGAP3-212ENST00000520860 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
SRGAP3-212ENST00000520860 KLHL34Q8N239 644 aa19.19■□□□□ 0.66
SRGAP3-212ENST00000520860 CARD10Q9BWT7 1032 aa19.19■□□□□ 0.66
SRGAP3-212ENST00000520860 AXIN2Q9Y2T1 843 aa19.19■□□□□ 0.66
SRGAP3-212ENST00000520860 USP6P35125 1406 aa19.17■□□□□ 0.66
SRGAP3-212ENST00000520860 COL18A1P39060 1754 aa19.17■□□□□ 0.66
SRGAP3-212ENST00000520860 CPSF1Q10570 1443 aaKnown RBP19.17■□□□□ 0.66
SRGAP3-212ENST00000520860 CABP2Q9NPB3 220 aa19.16■□□□□ 0.66
SRGAP3-212ENST00000520860 POLD1P28340 1107 aa19.15■□□□□ 0.66
SRGAP3-212ENST00000520860 CCDC7Q96M83 1385 aa19.15■□□□□ 0.66
SRGAP3-212ENST00000520860 TNS2Q63HR2 1409 aa19.15■□□□□ 0.66
SRGAP3-212ENST00000520860 ARHGEF25Q86VW2 580 aa19.14■□□□□ 0.65
SRGAP3-212ENST00000520860 ACSBG1Q96GR2 724 aa19.14■□□□□ 0.65
SRGAP3-212ENST00000520860 NHSQ6T4R5 1651 aa19.14■□□□□ 0.65
SRGAP3-212ENST00000520860 KCNH5Q8NCM2 988 aa19.13■□□□□ 0.65
SRGAP3-212ENST00000520860 CABP1Q9NZU7 370 aa19.13■□□□□ 0.65
SRGAP3-212ENST00000520860 PAPPAQ13219 1627 aa19.13■□□□□ 0.65
SRGAP3-212ENST00000520860 ZNF827Q17R98 1081 aa19.12■□□□□ 0.65
SRGAP3-212ENST00000520860 SLC16A10Q8TF71 515 aa19.12■□□□□ 0.65
SRGAP3-212ENST00000520860 RAB3GAP2Q9H2M9 1393 aa19.11■□□□□ 0.65
SRGAP3-212ENST00000520860 CENPJQ9HC77 1338 aaPredicted RBP19.11■□□□□ 0.65
SRGAP3-212ENST00000520860 SOX12O15370 315 aa19.11■□□□□ 0.65
SRGAP3-212ENST00000520860 SHANK3Q9BYB0 1731 aa19.11■□□□□ 0.65
SRGAP3-212ENST00000520860 PIK3C2AO00443 1686 aa19.1■□□□□ 0.65
SRGAP3-212ENST00000520860 RGPD5Q99666 1765 aa19.09■□□□□ 0.65
SRGAP3-212ENST00000520860 KAT6BQ8WYB5 2073 aa19.09■□□□□ 0.65
SRGAP3-212ENST00000520860 TRPM1Q7Z4N2 1603 aa19.08■□□□□ 0.65
SRGAP3-212ENST00000520860 GRIN3BO60391 1043 aa19.08■□□□□ 0.64
SRGAP3-212ENST00000520860 ABCC6O95255 1503 aa19.08■□□□□ 0.64
SRGAP3-212ENST00000520860 KIAA1210Q9ULL0 1709 aa19.08■□□□□ 0.64
SRGAP3-212ENST00000520860 QRICH2Q9H0J4 1663 aa19.08■□□□□ 0.64
SRGAP3-212ENST00000520860 LRRC4BQ9NT99 713 aa19.07■□□□□ 0.64
SRGAP3-212ENST00000520860 BTAF1O14981 1849 aa19.07■□□□□ 0.64
SRGAP3-212ENST00000520860 NBPF1Q3BBV0 1214 aa19.06■□□□□ 0.64
SRGAP3-212ENST00000520860 NLGN2Q8NFZ4 835 aa19.06■□□□□ 0.64
SRGAP3-212ENST00000520860 AKT1S1Q96B36 256 aa19.05■□□□□ 0.64
SRGAP3-212ENST00000520860 TTC21BQ7Z4L5 1316 aa19.04■□□□□ 0.64
SRGAP3-212ENST00000520860 SLC27A3Q5K4L6 730 aa19.04■□□□□ 0.64
SRGAP3-212ENST00000520860 NLRP2Q9NX02 1062 aa19.04■□□□□ 0.64
SRGAP3-212ENST00000520860 TFCP2L1Q9NZI6 479 aa19.04■□□□□ 0.64
SRGAP3-212ENST00000520860 CEP350Q5VT06 3117 aa19.04■□□□□ 0.64
SRGAP3-212ENST00000520860 PNPLA7Q6ZV29 1317 aa19.03■□□□□ 0.64
SRGAP3-212ENST00000520860 ATP10DQ9P241 1426 aa19.03■□□□□ 0.64
SRGAP3-212ENST00000520860 IL2RBP14784 551 aa19.03■□□□□ 0.64
SRGAP3-212ENST00000520860 ZNF692Q9BU19 519 aaPredicted RBP19.03■□□□□ 0.64
SRGAP3-212ENST00000520860 TTC21AQ8NDW8 1320 aa19.02■□□□□ 0.64
SRGAP3-212ENST00000520860 YBX3P16989 372 aaKnown RBP eCLIP19.02■□□□□ 0.64
SRGAP3-212ENST00000520860 GPBP1L1Q9HC44 474 aaPredicted RBP19.02■□□□□ 0.64
SRGAP3-212ENST00000520860 QSER1Q2KHR3 1735 aa19.02■□□□□ 0.63
SRGAP3-212ENST00000520860 NFAT5O94916 1531 aa19.01■□□□□ 0.63
SRGAP3-212ENST00000520860 HSPA6P17066 643 aa19.01■□□□□ 0.63
SRGAP3-212ENST00000520860 COL24A1Q17RW2 1714 aa19■□□□□ 0.63
SRGAP3-212ENST00000520860 ERBB3P21860 1342 aa19■□□□□ 0.63
SRGAP3-212ENST00000520860 EVC2Q86UK5 1308 aa19■□□□□ 0.63
SRGAP3-212ENST00000520860 MSH5O43196 834 aa18.95■□□□□ 0.62
SRGAP3-212ENST00000520860 KCNQ4P56696 695 aa18.94■□□□□ 0.62
SRGAP3-212ENST00000520860 ZNF526Q8TF50 670 aaPredicted RBP18.94■□□□□ 0.62
SRGAP3-212ENST00000520860 TUBGCP6Q96RT7 1819 aa18.94■□□□□ 0.62
SRGAP3-212ENST00000520860 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
SRGAP3-212ENST00000520860 DDX54Q8TDD1 881 aaKnown RBP18.93■□□□□ 0.62
SRGAP3-212ENST00000520860 ANKRD24Q8TF21 1146 aa18.93■□□□□ 0.62
SRGAP3-212ENST00000520860 SYTL4Q96C24 671 aaPredicted RBP18.93■□□□□ 0.62
SRGAP3-212ENST00000520860 ADCY9O60503 1353 aa18.91■□□□□ 0.62
SRGAP3-212ENST00000520860 GOLGB1Q14789 3259 aaKnown RBP18.9■□□□□ 0.62
SRGAP3-212ENST00000520860 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
SRGAP3-212ENST00000520860 PRIM1P49642 420 aaKnown RBP18.89■□□□□ 0.61
SRGAP3-212ENST00000520860 MSL1Q68DK7 614 aa18.89■□□□□ 0.61
SRGAP3-212ENST00000520860 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.89■□□□□ 0.61
SRGAP3-212ENST00000520860 CD2APQ9Y5K6 639 aa18.89■□□□□ 0.61
SRGAP3-212ENST00000520860 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
SRGAP3-212ENST00000520860 COL23A1Q86Y22 540 aaPredicted RBP18.88■□□□□ 0.61
SRGAP3-212ENST00000520860 ANKRD36BQ8N2N9 1353 aa18.88■□□□□ 0.61
SRGAP3-212ENST00000520860 LTN1O94822 1766 aa18.87■□□□□ 0.61
SRGAP3-212ENST00000520860 NME9Q86XW9 330 aa18.85■□□□□ 0.61
SRGAP3-212ENST00000520860 LY75O60449 1722 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms