RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	USP19	O94966	1318 aa		11.88	□□□□□ -0.51
PTK2-223	ENST00000520828	GC	P02774	474 aa		11.88	□□□□□ -0.51
PTK2-223	ENST00000520828	NLRP13	Q86W25	1043 aa		11.88	□□□□□ -0.51
PTK2-223	ENST00000520828	PROM2	Q8N271	834 aa		11.88	□□□□□ -0.51
PTK2-223	ENST00000520828	CDK19	Q9BWU1	502 aa		11.88	□□□□□ -0.51
PTK2-223	ENST00000520828	KDM2A	Q9Y2K7	1162 aa		11.88	□□□□□ -0.51
PTK2-223	ENST00000520828	CCDC61	Q9Y6R9	512 aa		11.88	□□□□□ -0.51
PTK2-223	ENST00000520828	ZBTB7C	A1YPR0	619 aa		11.87	□□□□□ -0.51
PTK2-223	ENST00000520828	PTF1A	Q7RTS3	328 aa		11.87	□□□□□ -0.51
PTK2-223	ENST00000520828	MTFR1L	Q9H019	292 aa		11.87	□□□□□ -0.51
PTK2-223	ENST00000520828	PLEKHG3	A1L390	1219 aa		11.86	□□□□□ -0.51
PTK2-223	ENST00000520828	SLC15A2	Q16348	729 aa		11.86	□□□□□ -0.51
PTK2-223	ENST00000520828	TOM1L2	Q6ZVM7	507 aa		11.86	□□□□□ -0.51
PTK2-223	ENST00000520828	DCAF11	Q8TEB1	546 aa		11.86	□□□□□ -0.51
PTK2-223	ENST00000520828	LRRC37A3	O60309	1634 aa		11.86	□□□□□ -0.51
PTK2-223	ENST00000520828	GIGYF1	O75420	1035 aa	Predicted RBP	11.85	□□□□□ -0.51
PTK2-223	ENST00000520828	TXNRD1	Q16881	649 aa		11.85	□□□□□ -0.51
PTK2-223	ENST00000520828	SBF2	Q86WG5	1849 aa		11.84	□□□□□ -0.51
PTK2-223	ENST00000520828	AATK	Q6ZMQ8	1374 aa		11.84	□□□□□ -0.51
PTK2-223	ENST00000520828	MARCH10	Q8NA82	808 aa	Predicted RBP	11.84	□□□□□ -0.51
PTK2-223	ENST00000520828	ARX	Q96QS3	562 aa		11.84	□□□□□ -0.51
PTK2-223	ENST00000520828	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.84	□□□□□ -0.51
PTK2-223	ENST00000520828	BCL9	O00512	1426 aa		11.84	□□□□□ -0.51
PTK2-223	ENST00000520828	TOPAZ1	Q8N9V7	1692 aa		11.84	□□□□□ -0.51
PTK2-223	ENST00000520828	GPR162	Q16538	588 aa		11.83	□□□□□ -0.52
PTK2-223	ENST00000520828	STAC3	Q96MF2	364 aa		11.83	□□□□□ -0.52
PTK2-223	ENST00000520828	SGIP1	Q9BQI5	828 aa		11.83	□□□□□ -0.52
PTK2-223	ENST00000520828	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.83	□□□□□ -0.52
PTK2-223	ENST00000520828	CHD4	Q14839	1912 aa		11.82	□□□□□ -0.52
PTK2-223	ENST00000520828	SLC4A2	P04920	1241 aa		11.82	□□□□□ -0.52
PTK2-223	ENST00000520828	BRD4	O60885	1362 aa	Predicted RBP	11.81	□□□□□ -0.52
PTK2-223	ENST00000520828	MAP3K5	Q99683	1374 aa		11.81	□□□□□ -0.52
PTK2-223	ENST00000520828	NLRP6	P59044	892 aa		11.81	□□□□□ -0.52
PTK2-223	ENST00000520828	WDR17	Q8IZU2	1322 aa		11.81	□□□□□ -0.52
PTK2-223	ENST00000520828	UTRN	P46939	3433 aa		11.8	□□□□□ -0.52
PTK2-223	ENST00000520828	PPIP5K1	Q6PFW1	1433 aa		11.8	□□□□□ -0.52
PTK2-223	ENST00000520828	EXOC5	O00471	708 aa		11.79	□□□□□ -0.52
PTK2-223	ENST00000520828	SRPK2	P78362	688 aa	Known RBP	11.79	□□□□□ -0.52
PTK2-223	ENST00000520828	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.79	□□□□□ -0.52
PTK2-223	ENST00000520828	AKAP12	Q02952	1782 aa		11.78	□□□□□ -0.52
PTK2-223	ENST00000520828	SLIT3	O75094	1523 aa		11.78	□□□□□ -0.52
PTK2-223	ENST00000520828	CSB-PGBD3	P0DP91	1061 aa		11.78	□□□□□ -0.52
PTK2-223	ENST00000520828	KLHL34	Q8N239	644 aa		11.78	□□□□□ -0.52
PTK2-223	ENST00000520828	CARD10	Q9BWT7	1032 aa		11.78	□□□□□ -0.52
PTK2-223	ENST00000520828	AXIN2	Q9Y2T1	843 aa		11.78	□□□□□ -0.52
PTK2-223	ENST00000520828	PELP1	Q8IZL8	1130 aa	Known RBP	11.77	□□□□□ -0.53
PTK2-223	ENST00000520828	WNK3	Q9BYP7	1800 aa		11.76	□□□□□ -0.53
PTK2-223	ENST00000520828	CEP350	Q5VT06	3117 aa		11.76	□□□□□ -0.53
PTK2-223	ENST00000520828	CAPN15	O75808	1086 aa		11.76	□□□□□ -0.53
PTK2-223	ENST00000520828	USP6	P35125	1406 aa		11.76	□□□□□ -0.53
PTK2-223	ENST00000520828	CPSF1	Q10570	1443 aa	Known RBP	11.76	□□□□□ -0.53
PTK2-223	ENST00000520828	POLD1	P28340	1107 aa		11.75	□□□□□ -0.53
PTK2-223	ENST00000520828	CABP2	Q9NPB3	220 aa		11.75	□□□□□ -0.53
PTK2-223	ENST00000520828	CABP1	Q9NZU7	370 aa		11.75	□□□□□ -0.53
PTK2-223	ENST00000520828	COL18A1	P39060	1754 aa		11.74	□□□□□ -0.53
PTK2-223	ENST00000520828	ZNF827	Q17R98	1081 aa		11.74	□□□□□ -0.53
PTK2-223	ENST00000520828	ARHGEF25	Q86VW2	580 aa		11.74	□□□□□ -0.53
PTK2-223	ENST00000520828	KCNH5	Q8NCM2	988 aa		11.74	□□□□□ -0.53
PTK2-223	ENST00000520828	SLC16A10	Q8TF71	515 aa		11.74	□□□□□ -0.53
PTK2-223	ENST00000520828	ACSBG1	Q96GR2	724 aa		11.74	□□□□□ -0.53
PTK2-223	ENST00000520828	CCDC7	Q96M83	1385 aa		11.74	□□□□□ -0.53
PTK2-223	ENST00000520828	TNS2	Q63HR2	1409 aa		11.74	□□□□□ -0.53
PTK2-223	ENST00000520828	SOX12	O15370	315 aa		11.73	□□□□□ -0.53
PTK2-223	ENST00000520828	DSG3	P32926	999 aa		11.73	□□□□□ -0.53
PTK2-223	ENST00000520828	PAPPA	Q13219	1627 aa		11.73	□□□□□ -0.53
PTK2-223	ENST00000520828	NHS	Q6T4R5	1651 aa		11.73	□□□□□ -0.53
PTK2-223	ENST00000520828	RAB3GAP2	Q9H2M9	1393 aa		11.72	□□□□□ -0.53
PTK2-223	ENST00000520828	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.72	□□□□□ -0.53
PTK2-223	ENST00000520828	GRIN3B	O60391	1043 aa		11.72	□□□□□ -0.53
PTK2-223	ENST00000520828	SHANK3	Q9BYB0	1731 aa		11.72	□□□□□ -0.53
PTK2-223	ENST00000520828	PIK3C2A	O00443	1686 aa		11.71	□□□□□ -0.54
PTK2-223	ENST00000520828	ABCC6	O95255	1503 aa		11.7	□□□□□ -0.54
PTK2-223	ENST00000520828	NLGN2	Q8NFZ4	835 aa		11.7	□□□□□ -0.54
PTK2-223	ENST00000520828	LRRC4B	Q9NT99	713 aa		11.7	□□□□□ -0.54
PTK2-223	ENST00000520828	TRPM1	Q7Z4N2	1603 aa		11.7	□□□□□ -0.54
PTK2-223	ENST00000520828	QRICH2	Q9H0J4	1663 aa		11.69	□□□□□ -0.54
PTK2-223	ENST00000520828	NBPF1	Q3BBV0	1214 aa		11.69	□□□□□ -0.54
PTK2-223	ENST00000520828	SLC27A3	Q5K4L6	730 aa		11.69	□□□□□ -0.54
PTK2-223	ENST00000520828	AKT1S1	Q96B36	256 aa		11.69	□□□□□ -0.54
PTK2-223	ENST00000520828	KIAA1210	Q9ULL0	1709 aa		11.69	□□□□□ -0.54
PTK2-223	ENST00000520828	TTC21B	Q7Z4L5	1316 aa		11.68	□□□□□ -0.54
PTK2-223	ENST00000520828	IL2RB	P14784	551 aa		11.68	□□□□□ -0.54
PTK2-223	ENST00000520828	ZNF692	Q9BU19	519 aa	Predicted RBP	11.68	□□□□□ -0.54
PTK2-223	ENST00000520828	NLRP2	Q9NX02	1062 aa		11.68	□□□□□ -0.54
PTK2-223	ENST00000520828	TFCP2L1	Q9NZI6	479 aa		11.68	□□□□□ -0.54
PTK2-223	ENST00000520828	ATP10D	Q9P241	1426 aa		11.68	□□□□□ -0.54
PTK2-223	ENST00000520828	PNPLA7	Q6ZV29	1317 aa		11.67	□□□□□ -0.54
PTK2-223	ENST00000520828	TTC21A	Q8NDW8	1320 aa		11.67	□□□□□ -0.54
PTK2-223	ENST00000520828	YBX3	P16989	372 aa	Known RBP eCLIP	11.67	□□□□□ -0.54	4e-9	■■□□□ 11.5
PTK2-223	ENST00000520828	HSPA6	P17066	643 aa		11.67	□□□□□ -0.54
PTK2-223	ENST00000520828	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.67	□□□□□ -0.54
PTK2-223	ENST00000520828	BTAF1	O14981	1849 aa		11.67	□□□□□ -0.54
PTK2-223	ENST00000520828	RGPD5	Q99666	1765 aa		11.67	□□□□□ -0.54
PTK2-223	ENST00000520828	NFAT5	O94916	1531 aa		11.66	□□□□□ -0.54
PTK2-223	ENST00000520828	ERBB3	P21860	1342 aa		11.65	□□□□□ -0.54
PTK2-223	ENST00000520828	EVC2	Q86UK5	1308 aa		11.65	□□□□□ -0.54
PTK2-223	ENST00000520828	GOLGB1	Q14789	3259 aa	Known RBP	11.65	□□□□□ -0.54
PTK2-223	ENST00000520828	QSER1	Q2KHR3	1735 aa		11.65	□□□□□ -0.54
PTK2-223	ENST00000520828	COL24A1	Q17RW2	1714 aa		11.64	□□□□□ -0.55
PTK2-223	ENST00000520828	KCNQ4	P56696	695 aa		11.62	□□□□□ -0.55

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