RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 FARP1Q9Y4F1 1045 aaPredicted RBP12.31□□□□□ -0.44
ZNF260-201ENST00000520608 NRKQ7Z2Y5 1582 aa12.3□□□□□ -0.44
ZNF260-201ENST00000520608 LRP5O75197 1615 aa12.3□□□□□ -0.44
ZNF260-201ENST00000520608 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
ZNF260-201ENST00000520608 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
ZNF260-201ENST00000520608 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
ZNF260-201ENST00000520608 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
ZNF260-201ENST00000520608 TNS1Q9HBL0 1735 aaKnown RBP12.29□□□□□ -0.44
ZNF260-201ENST00000520608 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
ZNF260-201ENST00000520608 TRIM37O94972 964 aa12.28□□□□□ -0.44
ZNF260-201ENST00000520608 FAM196AQ6ZSG2 479 aa12.28□□□□□ -0.44
ZNF260-201ENST00000520608 CABP2Q9NPB3 220 aa12.28□□□□□ -0.44
ZNF260-201ENST00000520608 QRICH2Q9H0J4 1663 aa12.28□□□□□ -0.44
ZNF260-201ENST00000520608 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
ZNF260-201ENST00000520608 PDE3BQ13370 1112 aa12.27□□□□□ -0.45
ZNF260-201ENST00000520608 R3HDM1Q15032 1099 aaKnown RBP12.27□□□□□ -0.45
ZNF260-201ENST00000520608 EZH2Q15910 746 aaKnown RBP12.27□□□□□ -0.45
ZNF260-201ENST00000520608 LARP1Q6PKG0 1096 aaKnown RBP12.27□□□□□ -0.45
ZNF260-201ENST00000520608 USP19O94966 1318 aa12.27□□□□□ -0.45
ZNF260-201ENST00000520608 CAMTA1Q9Y6Y1 1673 aa12.26□□□□□ -0.45
ZNF260-201ENST00000520608 APBA3O96018 575 aa12.26□□□□□ -0.45
ZNF260-201ENST00000520608 NLRP13Q86W25 1043 aa12.26□□□□□ -0.45
ZNF260-201ENST00000520608 CPDO75976 1380 aa12.26□□□□□ -0.45
ZNF260-201ENST00000520608 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
ZNF260-201ENST00000520608 GCP02774 474 aa12.25□□□□□ -0.45
ZNF260-201ENST00000520608 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
ZNF260-201ENST00000520608 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
ZNF260-201ENST00000520608 CABP1Q9NZU7 370 aa12.24□□□□□ -0.45
ZNF260-201ENST00000520608 COL5A2P05997 1499 aaPredicted RBP12.23□□□□□ -0.45
ZNF260-201ENST00000520608 USP6P35125 1406 aa12.23□□□□□ -0.45
ZNF260-201ENST00000520608 NLRP6P59044 892 aa12.23□□□□□ -0.45
ZNF260-201ENST00000520608 CAMKK2Q96RR4 588 aa12.23□□□□□ -0.45
ZNF260-201ENST00000520608 BRD4O60885 1362 aaPredicted RBP12.22□□□□□ -0.45
ZNF260-201ENST00000520608 PARD3Q8TEW0 1356 aa12.22□□□□□ -0.45
ZNF260-201ENST00000520608 L3MBTL2Q969R5 705 aa12.22□□□□□ -0.45
ZNF260-201ENST00000520608 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
ZNF260-201ENST00000520608 CRB1P82279 1406 aa12.21□□□□□ -0.45
ZNF260-201ENST00000520608 EVC2Q86UK5 1308 aa12.21□□□□□ -0.45
ZNF260-201ENST00000520608 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
ZNF260-201ENST00000520608 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
ZNF260-201ENST00000520608 PIK3C2AO00443 1686 aa12.2□□□□□ -0.46
ZNF260-201ENST00000520608 TRPM1Q7Z4N2 1603 aa12.2□□□□□ -0.46
ZNF260-201ENST00000520608 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
ZNF260-201ENST00000520608 SLIT3O75094 1523 aa12.2□□□□□ -0.46
ZNF260-201ENST00000520608 RREB1Q92766 1687 aa12.19□□□□□ -0.46
ZNF260-201ENST00000520608 SOX12O15370 315 aa12.19□□□□□ -0.46
ZNF260-201ENST00000520608 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
ZNF260-201ENST00000520608 TOM1L2Q6ZVM7 507 aa12.19□□□□□ -0.46
ZNF260-201ENST00000520608 SIN3AQ96ST3 1273 aa12.19□□□□□ -0.46
ZNF260-201ENST00000520608 NUP188Q5SRE5 1749 aa12.19□□□□□ -0.46
ZNF260-201ENST00000520608 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
ZNF260-201ENST00000520608 OVOS2A0A0G2JMS6 1433 aa12.18□□□□□ -0.46
ZNF260-201ENST00000520608 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
ZNF260-201ENST00000520608 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
ZNF260-201ENST00000520608 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
ZNF260-201ENST00000520608 DDB1Q16531 1140 aa12.17□□□□□ -0.46
ZNF260-201ENST00000520608 ZNF579Q8NAF0 562 aaKnown RBP12.17□□□□□ -0.46
ZNF260-201ENST00000520608 CPSF1Q10570 1443 aaKnown RBP12.17□□□□□ -0.46
ZNF260-201ENST00000520608 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
ZNF260-201ENST00000520608 CSB-PGBD3P0DP91 1061 aa12.16□□□□□ -0.46
ZNF260-201ENST00000520608 TTC21BQ7Z4L5 1316 aa12.15□□□□□ -0.46
ZNF260-201ENST00000520608 WDR17Q8IZU2 1322 aa12.15□□□□□ -0.46
ZNF260-201ENST00000520608 KCNH5Q8NCM2 988 aa12.15□□□□□ -0.46
ZNF260-201ENST00000520608 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
ZNF260-201ENST00000520608 AKAP12Q02952 1782 aa12.15□□□□□ -0.46
ZNF260-201ENST00000520608 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
ZNF260-201ENST00000520608 WNK3Q9BYP7 1800 aa12.14□□□□□ -0.47
ZNF260-201ENST00000520608 COL18A1P39060 1754 aa12.14□□□□□ -0.47
ZNF260-201ENST00000520608 KTN1Q86UP2 1357 aaKnown RBP12.14□□□□□ -0.47
ZNF260-201ENST00000520608 TTC21AQ8NDW8 1320 aa12.13□□□□□ -0.47
ZNF260-201ENST00000520608 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
ZNF260-201ENST00000520608 PPP1R1BQ9UD71 204 aaPredicted RBP12.13□□□□□ -0.47
ZNF260-201ENST00000520608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.12□□□□□ -0.47
ZNF260-201ENST00000520608 CDCA7Q9BWT1 371 aaPredicted RBP12.12□□□□□ -0.47
ZNF260-201ENST00000520608 NFAT5O94916 1531 aa12.11□□□□□ -0.47
ZNF260-201ENST00000520608 RGPD3A6NKT7 1758 aaPredicted RBP12.11□□□□□ -0.47
ZNF260-201ENST00000520608 RGPD4Q7Z3J3 1758 aa12.11□□□□□ -0.47
ZNF260-201ENST00000520608 RGPD5Q99666 1765 aa12.11□□□□□ -0.47
ZNF260-201ENST00000520608 MARCH10Q8NA82 808 aaPredicted RBP12.11□□□□□ -0.47
ZNF260-201ENST00000520608 SPON1Q9HCB6 807 aa12.11□□□□□ -0.47
ZNF260-201ENST00000520608 SBF2Q86WG5 1849 aa12.11□□□□□ -0.47
ZNF260-201ENST00000520608 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
ZNF260-201ENST00000520608 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
ZNF260-201ENST00000520608 CARD10Q9BWT7 1032 aa12.1□□□□□ -0.47
ZNF260-201ENST00000520608 CARD11Q9BXL7 1154 aa12.1□□□□□ -0.47
ZNF260-201ENST00000520608 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
ZNF260-201ENST00000520608 MON2Q7Z3U7 1717 aa12.09□□□□□ -0.47
ZNF260-201ENST00000520608 PLSCR1O15162 318 aa12.09□□□□□ -0.47
ZNF260-201ENST00000520608 KCNQ2O43526 872 aa12.09□□□□□ -0.47
ZNF260-201ENST00000520608 OTUD5Q96G74 571 aa12.09□□□□□ -0.47
ZNF260-201ENST00000520608 CCDC7Q96M83 1385 aa12.08□□□□□ -0.48
ZNF260-201ENST00000520608 ABCC6O95255 1503 aa12.08□□□□□ -0.48
ZNF260-201ENST00000520608 EXOC5O00471 708 aa12.08□□□□□ -0.48
ZNF260-201ENST00000520608 ANO8Q9HCE9 1232 aaPredicted RBP12.08□□□□□ -0.48
ZNF260-201ENST00000520608 SBNO2Q9Y2G9 1366 aa12.07□□□□□ -0.48
ZNF260-201ENST00000520608 POTEMA6NI47 508 aa12.07□□□□□ -0.48
ZNF260-201ENST00000520608 TNS2Q63HR2 1409 aa12.07□□□□□ -0.48
ZNF260-201ENST00000520608 HDGFL2Q7Z4V5 671 aaPredicted RBP12.07□□□□□ -0.48
ZNF260-201ENST00000520608 NME9Q86XW9 330 aa12.07□□□□□ -0.48
ZNF260-201ENST00000520608 NLRP2Q9NX02 1062 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms