RNA–Protein interactions for RNA: ENST00000520549.1

IRGM-201, Transcript of immunity related GTPase M, humanhuman

TSL 1 (best)

Gene IRGM, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRGM-201ENST00000520549 TMEM151AQ8N4L1 468 aa12.92□□□□□ -0.34
IRGM-201ENST00000520549 FIGNL2A6NMB9 653 aa12.91□□□□□ -0.34
IRGM-201ENST00000520549 RNF225M0QZC1 329 aaPredicted RBP12.91□□□□□ -0.34
IRGM-201ENST00000520549 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
IRGM-201ENST00000520549 PGPEP1Q9NXJ5 209 aa12.9□□□□□ -0.34
IRGM-201ENST00000520549 PPP1R26Q5T8A7 1209 aaPredicted RBP12.89□□□□□ -0.35
IRGM-201ENST00000520549 COL25A1Q9BXS0 654 aaPredicted RBP12.89□□□□□ -0.35
IRGM-201ENST00000520549 GDF11O95390 407 aa12.88□□□□□ -0.35
IRGM-201ENST00000520549 RASSF7Q02833 373 aa12.88□□□□□ -0.35
IRGM-201ENST00000520549 CBLBQ13191 982 aa12.88□□□□□ -0.35
IRGM-201ENST00000520549 ERFEQ4G0M1 354 aa12.88□□□□□ -0.35
IRGM-201ENST00000520549 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
IRGM-201ENST00000520549 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
IRGM-201ENST00000520549 Q6ZVU0 165 aa12.87□□□□□ -0.35
IRGM-201ENST00000520549 CCDC155Q8N6L0 562 aa12.87□□□□□ -0.35
IRGM-201ENST00000520549 NANOS1Q8WY41 292 aaKnown RBP12.87□□□□□ -0.35
IRGM-201ENST00000520549 SPINT1O43278 529 aa12.86□□□□□ -0.35
IRGM-201ENST00000520549 SVOPQ8N4V2 548 aa12.84□□□□□ -0.35
IRGM-201ENST00000520549 CLK2P49760 499 aaKnown RBP12.83□□□□□ -0.36
IRGM-201ENST00000520549 PDE4DQ08499 809 aa12.83□□□□□ -0.36
IRGM-201ENST00000520549 SLC35F4A4IF30 521 aa12.82□□□□□ -0.36
IRGM-201ENST00000520549 RNFT1Q5M7Z0 435 aa12.82□□□□□ -0.36
IRGM-201ENST00000520549 ZNF385CQ66K41 422 aaPredicted RBP12.82□□□□□ -0.36
IRGM-201ENST00000520549 ARHGAP9Q9BRR9 750 aa12.82□□□□□ -0.36
IRGM-201ENST00000520549 DHX9Q08211 1270 aaKnown RBP12.81□□□□□ -0.36
IRGM-201ENST00000520549 SLC10A4Q96EP9 437 aa12.81□□□□□ -0.36
IRGM-201ENST00000520549 KCTD15Q96SI1 283 aaPredicted RBP12.81□□□□□ -0.36
IRGM-201ENST00000520549 CDV3Q9UKY7 258 aaKnown RBP12.81□□□□□ -0.36
IRGM-201ENST00000520549 PDXDC2PQ6P474 469 aa12.8□□□□□ -0.36
IRGM-201ENST00000520549 CDC14CA4D256 554 aa12.78□□□□□ -0.36
IRGM-201ENST00000520549 ITGA6P23229 1130 aa12.78□□□□□ -0.36
IRGM-201ENST00000520549 VWA5B2Q8N398 1253 aa12.78□□□□□ -0.36
IRGM-201ENST00000520549 CTSOP43234 321 aaPredicted RBP12.77□□□□□ -0.37
IRGM-201ENST00000520549 CTDSPL2Q05D32 466 aa12.77□□□□□ -0.37
IRGM-201ENST00000520549 SV2AQ7L0J3 742 aa12.77□□□□□ -0.37
IRGM-201ENST00000520549 ZBTB33Q86T24 672 aa12.77□□□□□ -0.37
IRGM-201ENST00000520549 SLURP2P0DP57 97 aa12.76□□□□□ -0.37
IRGM-201ENST00000520549 RELBQ01201 579 aa12.76□□□□□ -0.37
IRGM-201ENST00000520549 AGBL1Q96MI9 1066 aa12.76□□□□□ -0.37
IRGM-201ENST00000520549 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
IRGM-201ENST00000520549 FKBPLQ9UIM3 349 aa12.76□□□□□ -0.37
IRGM-201ENST00000520549 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
IRGM-201ENST00000520549 INSM2Q96T92 566 aaPredicted RBP12.75□□□□□ -0.37
IRGM-201ENST00000520549 POLMQ9NP87 494 aaPredicted RBP12.75□□□□□ -0.37
IRGM-201ENST00000520549 POLR3EQ9NVU0 708 aa12.75□□□□□ -0.37
IRGM-201ENST00000520549 INTS6LQ5JSJ4 861 aaKnown RBP12.74□□□□□ -0.37
IRGM-201ENST00000520549 ARHGEF15O94989 841 aa12.72□□□□□ -0.37
IRGM-201ENST00000520549 ZC3H4Q9UPT8 1303 aaKnown RBP12.71□□□□□ -0.37
IRGM-201ENST00000520549 IRS1P35568 1242 aa12.71□□□□□ -0.37
IRGM-201ENST00000520549 MARSP56192 900 aaKnown RBP12.71□□□□□ -0.37
IRGM-201ENST00000520549 RNF217Q8TC41 542 aa12.71□□□□□ -0.37
IRGM-201ENST00000520549 LRRN4Q8WUT4 740 aa12.71□□□□□ -0.37
IRGM-201ENST00000520549 ZNF395Q9H8N7 513 aaPredicted RBP12.7□□□□□ -0.38
IRGM-201ENST00000520549 DNMT3AQ9Y6K1 912 aaPredicted RBP12.7□□□□□ -0.38
IRGM-201ENST00000520549 PTK2Q05397 1052 aa12.69□□□□□ -0.38
IRGM-201ENST00000520549 NR6A1Q15406 480 aa12.68□□□□□ -0.38
IRGM-201ENST00000520549 GPAT2Q6NUI2 795 aa12.68□□□□□ -0.38
IRGM-201ENST00000520549 KANK3Q6NY19 840 aa12.67□□□□□ -0.38
IRGM-201ENST00000520549 SLC24A3Q9HC58 644 aa12.67□□□□□ -0.38
IRGM-201ENST00000520549 SENP3-EIF4A1A0A087X0R7 540 aa12.66□□□□□ -0.38
IRGM-201ENST00000520549 IGHA1P01876 353 aa12.66□□□□□ -0.38
IRGM-201ENST00000520549 NBPF20Q3BBV1 942 aa12.66□□□□□ -0.38
IRGM-201ENST00000520549 SCARF2Q96GP6 870 aaPredicted RBP12.66□□□□□ -0.38
IRGM-201ENST00000520549 TMPRSS4Q9NRS4 437 aa12.66□□□□□ -0.38
IRGM-201ENST00000520549 GPSM3Q9Y4H4 160 aa12.66□□□□□ -0.38
IRGM-201ENST00000520549 ADAMTS2O95450 1211 aa12.65□□□□□ -0.38
IRGM-201ENST00000520549 ADAM32Q8TC27 787 aa12.65□□□□□ -0.38
IRGM-201ENST00000520549 OCSTAMPQ9BR26 566 aa12.65□□□□□ -0.38
IRGM-201ENST00000520549 ZNF784Q8NCA9 323 aaPredicted RBP12.64□□□□□ -0.39
IRGM-201ENST00000520549 ADH1AP07327 375 aa12.63□□□□□ -0.39
IRGM-201ENST00000520549 RAB15P59190 212 aa12.63□□□□□ -0.39
IRGM-201ENST00000520549 MAP3K10Q02779 954 aa12.63□□□□□ -0.39
IRGM-201ENST00000520549 FOXK2Q01167 660 aa12.62□□□□□ -0.39
IRGM-201ENST00000520549 SRSF11Q05519 484 aaKnown RBP12.62□□□□□ -0.39
IRGM-201ENST00000520549 FOXD4L5Q5VV16 416 aaPredicted RBP12.62□□□□□ -0.39
IRGM-201ENST00000520549 LYPD4Q6UWN0 246 aa12.62□□□□□ -0.39
IRGM-201ENST00000520549 PTGIRP43119 386 aa12.59□□□□□ -0.39
IRGM-201ENST00000520549 LYSMD3Q7Z3D4 306 aa12.59□□□□□ -0.39
IRGM-201ENST00000520549 ERVH48-1M5A8F1 160 aa12.58□□□□□ -0.4
IRGM-201ENST00000520549 ADD1P35611 737 aaKnown RBP12.58□□□□□ -0.4
IRGM-201ENST00000520549 SKIV2LQ15477 1246 aaKnown RBP12.58□□□□□ -0.4
IRGM-201ENST00000520549 FBXO31Q5XUX0 539 aaPredicted RBP12.58□□□□□ -0.4
IRGM-201ENST00000520549 PNMA1Q8ND90 353 aa12.58□□□□□ -0.4
IRGM-201ENST00000520549 LILRA1O75019 489 aa12.57□□□□□ -0.4
IRGM-201ENST00000520549 CELA2BP08218 269 aaPredicted RBP12.57□□□□□ -0.4
IRGM-201ENST00000520549 GAS6Q14393 721 aa12.57□□□□□ -0.4
IRGM-201ENST00000520549 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
IRGM-201ENST00000520549 CUEDC1Q9NWM3 386 aaPredicted RBP12.57□□□□□ -0.4
IRGM-201ENST00000520549 ATP1B4Q9UN42 357 aaPredicted RBP12.57□□□□□ -0.4
IRGM-201ENST00000520549 ENAMQ9NRM1 1142 aa12.56□□□□□ -0.4
IRGM-201ENST00000520549 AP1G2O75843 785 aa12.55□□□□□ -0.4
IRGM-201ENST00000520549 PPP2R2DQ66LE6 453 aa12.55□□□□□ -0.4
IRGM-201ENST00000520549 KDF1Q8NAX2 398 aaPredicted RBP12.55□□□□□ -0.4
IRGM-201ENST00000520549 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
IRGM-201ENST00000520549 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
IRGM-201ENST00000520549 PRICKLE2Q7Z3G6 844 aa12.53□□□□□ -0.4
IRGM-201ENST00000520549 PROCA1Q8NCQ7 364 aaPredicted RBP12.53□□□□□ -0.4
IRGM-201ENST00000520549 EPS8L1Q8TE68 723 aa12.53□□□□□ -0.4
IRGM-201ENST00000520549 ESPNB1AK53 854 aa12.52□□□□□ -0.41
IRGM-201ENST00000520549 RHOQP17081 205 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms